RNA–Protein interactions for RNA: ENST00000514030.1

SNX2-212, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 823 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-212ENST00000514030 HOMEZQ8IX15 550 aa7.88□□□□□ -1.15
SNX2-212ENST00000514030 BCL7CQ8WUZ0 217 aaPredicted RBP7.88□□□□□ -1.15
SNX2-212ENST00000514030 COL19A1Q14993 1142 aa7.87□□□□□ -1.15
SNX2-212ENST00000514030 WDR18Q9BV38 432 aa7.87□□□□□ -1.15
SNX2-212ENST00000514030 KRTAP4-7Q9BYR0 210 aa7.87□□□□□ -1.15
SNX2-212ENST00000514030 C1GALT1Q9NS00 363 aa7.87□□□□□ -1.15
SNX2-212ENST00000514030 EGFL7Q9UHF1 273 aa7.87□□□□□ -1.15
SNX2-212ENST00000514030 NDUFB5O43674 189 aa7.86□□□□□ -1.15
SNX2-212ENST00000514030 ECEL1O95672 775 aa7.86□□□□□ -1.15
SNX2-212ENST00000514030 ITPKAP23677 461 aa7.86□□□□□ -1.15
SNX2-212ENST00000514030 PTPN12Q05209 780 aaKnown RBP7.86□□□□□ -1.15
SNX2-212ENST00000514030 PDE3BQ13370 1112 aa7.86□□□□□ -1.15
SNX2-212ENST00000514030 SEZ6L2Q6UXD5 910 aa7.86□□□□□ -1.15
SNX2-212ENST00000514030 GLYCTKQ8IVS8 523 aa7.86□□□□□ -1.15
SNX2-212ENST00000514030 ATXN3LQ9H3M9 355 aa7.86□□□□□ -1.15
SNX2-212ENST00000514030 CPNE3O75131 537 aaKnown RBP7.85□□□□□ -1.15
SNX2-212ENST00000514030 PAPLNO95428 1278 aa7.85□□□□□ -1.15
SNX2-212ENST00000514030 ZNF792Q3KQV3 632 aa7.85□□□□□ -1.15
SNX2-212ENST00000514030 LCE1DQ5T752 114 aa7.85□□□□□ -1.15
SNX2-212ENST00000514030 ZNF574Q6ZN55 896 aaPredicted RBP7.85□□□□□ -1.15
SNX2-212ENST00000514030 ARHGAP27Q6ZUM4 889 aa7.85□□□□□ -1.15
SNX2-212ENST00000514030 CCDC82Q8N4S0 544 aa7.85□□□□□ -1.15
SNX2-212ENST00000514030 LGR6Q9HBX8 967 aa7.85□□□□□ -1.15
SNX2-212ENST00000514030 NPHS2Q9NP85 383 aa7.85□□□□□ -1.15
SNX2-212ENST00000514030 H3BRB1 525 aa7.84□□□□□ -1.15
SNX2-212ENST00000514030 DYNC1LI2O43237 492 aaPredicted RBP7.84□□□□□ -1.15
SNX2-212ENST00000514030 SLFN14P0C7P3 912 aa7.84□□□□□ -1.15
SNX2-212ENST00000514030 NETO1Q8TDF5 533 aa7.84□□□□□ -1.15
SNX2-212ENST00000514030 TUT1Q9H6E5 874 aaKnown RBP7.84□□□□□ -1.15
SNX2-212ENST00000514030 TMPRSS2O15393 492 aa7.83□□□□□ -1.16
SNX2-212ENST00000514030 ICMTO60725 284 aa7.83□□□□□ -1.16
SNX2-212ENST00000514030 FAM87AP0C7U9 286 aa7.83□□□□□ -1.16
SNX2-212ENST00000514030 ID3Q02535 119 aa7.83□□□□□ -1.16
SNX2-212ENST00000514030 RPS26P11Q5JNZ5 115 aaPredicted RBP7.83□□□□□ -1.16
SNX2-212ENST00000514030 USPL1Q5W0Q7 1092 aa7.83□□□□□ -1.16
SNX2-212ENST00000514030 TRAK1Q9UPV9 953 aa7.83□□□□□ -1.16
SNX2-212ENST00000514030 PKN1Q16512 942 aa7.82□□□□□ -1.16
SNX2-212ENST00000514030 PHLDB3Q6NSJ2 640 aa7.82□□□□□ -1.16
SNX2-212ENST00000514030 ATG4DQ86TL0 474 aaPredicted RBP7.82□□□□□ -1.16
SNX2-212ENST00000514030 RC3H2Q9HBD1 1191 aaKnown RBP7.82□□□□□ -1.16
SNX2-212ENST00000514030 PPP1R9AQ9ULJ8 1098 aa7.82□□□□□ -1.16
SNX2-212ENST00000514030 GADD45BO75293 160 aaPredicted RBP7.81□□□□□ -1.16
SNX2-212ENST00000514030 CDK5R2Q13319 367 aa7.81□□□□□ -1.16
SNX2-212ENST00000514030 PRPF40BQ6NWY9 871 aaKnown RBP7.81□□□□□ -1.16
SNX2-212ENST00000514030 ABCB6Q9NP58 842 aa7.81□□□□□ -1.16
SNX2-212ENST00000514030 CRIM1Q9NZV1 1036 aa7.81□□□□□ -1.16
SNX2-212ENST00000514030 LIG1P18858 919 aa7.8□□□□□ -1.16
SNX2-212ENST00000514030 FUT4P22083 530 aa7.8□□□□□ -1.16
SNX2-212ENST00000514030 ORC1Q13415 861 aa7.8□□□□□ -1.16
SNX2-212ENST00000514030 SPRED2Q7Z698 418 aa7.8□□□□□ -1.16
SNX2-212ENST00000514030 SMYD4Q8IYR2 804 aaPredicted RBP7.8□□□□□ -1.16
SNX2-212ENST00000514030 PLD6Q8N2A8 252 aaKnown RBP7.8□□□□□ -1.16
SNX2-212ENST00000514030 FANCD2OSQ96PS1 177 aa7.8□□□□□ -1.16
SNX2-212ENST00000514030 DNAJC25Q9H1X3 360 aa7.8□□□□□ -1.16
SNX2-212ENST00000514030 KRT82Q9NSB4 513 aa7.8□□□□□ -1.16
SNX2-212ENST00000514030 VAV3Q9UKW4 847 aa7.8□□□□□ -1.16
SNX2-212ENST00000514030 FARP2O94887 1054 aaPredicted RBP7.79□□□□□ -1.16
SNX2-212ENST00000514030 PRKCQQ04759 706 aa7.79□□□□□ -1.16
SNX2-212ENST00000514030 BNIP3Q12983 259 aa7.79□□□□□ -1.16
SNX2-212ENST00000514030 IFI16Q16666 785 aaKnown RBP7.79□□□□□ -1.16
SNX2-212ENST00000514030 ZNF648Q5T619 568 aaPredicted RBP7.79□□□□□ -1.16
SNX2-212ENST00000514030 FAM168AQ92567 244 aa7.79□□□□□ -1.16
SNX2-212ENST00000514030 HRASLS5Q96KN8 279 aa7.79□□□□□ -1.16
SNX2-212ENST00000514030 CITED4Q96RK1 184 aa7.79□□□□□ -1.16
SNX2-212ENST00000514030 ZC3H12CQ9C0D7 883 aaKnown RBP7.79□□□□□ -1.16
SNX2-212ENST00000514030 MKNK2Q9HBH9 465 aa7.79□□□□□ -1.16
SNX2-212ENST00000514030 TMEM238LA0A1B0GVL6 79 aa7.78□□□□□ -1.16
SNX2-212ENST00000514030 RNGTTO60942 597 aaKnown RBP7.78□□□□□ -1.16
SNX2-212ENST00000514030 CD8BP10966 210 aa7.78□□□□□ -1.16
SNX2-212ENST00000514030 PPP2R3AQ06190 1150 aa7.78□□□□□ -1.16
SNX2-212ENST00000514030 WFDC3Q8IUB2 231 aa7.78□□□□□ -1.16
SNX2-212ENST00000514030 FAM181AQ8N9Y4 354 aa7.78□□□□□ -1.16
SNX2-212ENST00000514030 PI4K2BQ8TCG2 481 aa7.78□□□□□ -1.16
SNX2-212ENST00000514030 TMC1Q8TDI8 760 aa7.78□□□□□ -1.16
SNX2-212ENST00000514030 FAM129BQ96TA1 746 aa7.78□□□□□ -1.16
SNX2-212ENST00000514030 CCDC86Q9H6F5 360 aaKnown RBP7.78□□□□□ -1.16
SNX2-212ENST00000514030 USTQ9Y2C2 406 aa7.78□□□□□ -1.16
SNX2-212ENST00000514030 CEACAM5P06731 702 aa7.77□□□□□ -1.17
SNX2-212ENST00000514030 GSTP1P09211 210 aaKnown RBP7.77□□□□□ -1.17
SNX2-212ENST00000514030 KIF4BQ2VIQ3 1234 aa7.77□□□□□ -1.17
SNX2-212ENST00000514030 CCDC74AQ96AQ1 378 aa7.77□□□□□ -1.17
SNX2-212ENST00000514030 SLC38A3Q99624 504 aa7.77□□□□□ -1.17
SNX2-212ENST00000514030 SSU72Q9NP77 194 aaKnown RBP7.77□□□□□ -1.17
SNX2-212ENST00000514030 GPN3Q9UHW5 284 aaPredicted RBP7.77□□□□□ -1.17
SNX2-212ENST00000514030 PCOLCE2Q9UKZ9 415 aa7.77□□□□□ -1.17
SNX2-212ENST00000514030 TMEM265A0A087WTH1 108 aa7.76□□□□□ -1.17
SNX2-212ENST00000514030 EIF1AYO14602 144 aaKnown RBP7.76□□□□□ -1.17
SNX2-212ENST00000514030 RNASE1P07998 156 aaKnown RBP7.76□□□□□ -1.17
SNX2-212ENST00000514030 ZNF157P51786 506 aaPredicted RBP7.76□□□□□ -1.17
SNX2-212ENST00000514030 TTLL4Q14679 1199 aa7.76□□□□□ -1.17
SNX2-212ENST00000514030 ANGEL2Q5VTE6 544 aaKnown RBP7.76□□□□□ -1.17
SNX2-212ENST00000514030 DTHD1Q6ZMT9 781 aa7.76□□□□□ -1.17
SNX2-212ENST00000514030 KSR1Q8IVT5 923 aa7.76□□□□□ -1.17
SNX2-212ENST00000514030 WDR89Q96FK6 387 aaPredicted RBP7.76□□□□□ -1.17
SNX2-212ENST00000514030 PPP4R2Q9NY27 417 aa7.76□□□□□ -1.17
SNX2-212ENST00000514030 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.76□□□□□ -1.17
SNX2-212ENST00000514030 CARNS1A5YM72 827 aa7.75□□□□□ -1.17
SNX2-212ENST00000514030 DBX1A6NMT0 343 aa7.75□□□□□ -1.17
SNX2-212ENST00000514030 HCLS1P14317 486 aaPredicted RBP7.75□□□□□ -1.17
SNX2-212ENST00000514030 SERPINB4P48594 390 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms