RNA–Protein interactions for RNA: ENST00000513993.5

SLC38A9-220, Transcript of solute carrier family 38 member 9, humanhuman

TSL 4

Gene SLC38A9, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-220ENST00000513993 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.51□□□□□ -0.89
SLC38A9-220ENST00000513993 USP26Q9BXU7 913 aa9.51□□□□□ -0.89
SLC38A9-220ENST00000513993 GINM1Q9NU53 330 aa9.51□□□□□ -0.89
SLC38A9-220ENST00000513993 TM4SF5O14894 197 aa9.5□□□□□ -0.89
SLC38A9-220ENST00000513993 DEAF1O75398 565 aaPredicted RBP9.5□□□□□ -0.89
SLC38A9-220ENST00000513993 GTF2F1P35269 517 aaKnown RBP eCLIP9.5□□□□□ -0.89
SLC38A9-220ENST00000513993 SEZ6Q53EL9 994 aa9.5□□□□□ -0.89
SLC38A9-220ENST00000513993 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.5□□□□□ -0.89
SLC38A9-220ENST00000513993 ILDR2Q71H61 639 aa9.5□□□□□ -0.89
SLC38A9-220ENST00000513993 GATAD2BQ8WXI9 593 aa9.5□□□□□ -0.89
SLC38A9-220ENST00000513993 NKD1Q969G9 470 aa9.5□□□□□ -0.89
SLC38A9-220ENST00000513993 NRSN2Q9GZP1 204 aa9.5□□□□□ -0.89
SLC38A9-220ENST00000513993 KCNK4Q9NYG8 393 aa9.5□□□□□ -0.89
SLC38A9-220ENST00000513993 FAM221AA4D161 298 aa9.49□□□□□ -0.89
SLC38A9-220ENST00000513993 ADAM11O75078 769 aa9.49□□□□□ -0.89
SLC38A9-220ENST00000513993 SNRPNP63162 240 aaKnown RBP9.49□□□□□ -0.89
SLC38A9-220ENST00000513993 SUZ12Q15022 739 aaKnown RBP9.49□□□□□ -0.89
SLC38A9-220ENST00000513993 KLHL23Q8NBE8 558 aa9.49□□□□□ -0.89
SLC38A9-220ENST00000513993 GPBAR1Q8TDU6 330 aa9.49□□□□□ -0.89
SLC38A9-220ENST00000513993 ACSBG1Q96GR2 724 aa9.49□□□□□ -0.89
SLC38A9-220ENST00000513993 CCDC86Q9H6F5 360 aaKnown RBP9.49□□□□□ -0.89
SLC38A9-220ENST00000513993 FGRP09769 529 aa9.48□□□□□ -0.89
SLC38A9-220ENST00000513993 CD68P34810 354 aaPredicted RBP9.48□□□□□ -0.89
SLC38A9-220ENST00000513993 CDK8P49336 464 aa9.48□□□□□ -0.89
SLC38A9-220ENST00000513993 PDE3AQ14432 1141 aa9.48□□□□□ -0.89
SLC38A9-220ENST00000513993 FOXD4L6Q3SYB3 417 aaPredicted RBP9.48□□□□□ -0.89
SLC38A9-220ENST00000513993 FOXD4L3Q6VB84 417 aaPredicted RBP9.48□□□□□ -0.89
SLC38A9-220ENST00000513993 CCDC84Q86UT8 332 aaPredicted RBP9.48□□□□□ -0.89
SLC38A9-220ENST00000513993 UBXN4Q92575 508 aa9.48□□□□□ -0.89
SLC38A9-220ENST00000513993 TRIM11Q96F44 468 aa9.48□□□□□ -0.89
SLC38A9-220ENST00000513993 ENAMQ9NRM1 1142 aa9.48□□□□□ -0.89
SLC38A9-220ENST00000513993 LOC105371045A0A1W2PR82 267 aa9.47□□□□□ -0.89
SLC38A9-220ENST00000513993 TRIM37O94972 964 aa9.47□□□□□ -0.89
SLC38A9-220ENST00000513993 LIG1P18858 919 aa9.47□□□□□ -0.89
SLC38A9-220ENST00000513993 MCM4P33991 863 aa9.47□□□□□ -0.89
SLC38A9-220ENST00000513993 LCE2AQ5TA79 106 aaPredicted RBP9.47□□□□□ -0.89
SLC38A9-220ENST00000513993 WDR89Q96FK6 387 aaPredicted RBP9.47□□□□□ -0.89
SLC38A9-220ENST00000513993 DNAJC2Q99543 621 aaKnown RBP9.47□□□□□ -0.89
SLC38A9-220ENST00000513993 PCDHA4Q9UN74 947 aa9.47□□□□□ -0.89
SLC38A9-220ENST00000513993 LOC100289279A0A1B0GTE1 492 aa9.46□□□□□ -0.9
SLC38A9-220ENST00000513993 FAM229AH3BQW9 127 aa9.46□□□□□ -0.9
SLC38A9-220ENST00000513993 CILPO75339 1184 aa9.46□□□□□ -0.9
SLC38A9-220ENST00000513993 DLGAP3O95886 979 aa9.46□□□□□ -0.9
SLC38A9-220ENST00000513993 LINC00114Q6XXX2 140 aa9.46□□□□□ -0.9
SLC38A9-220ENST00000513993 SEC16BQ96JE7 1060 aa9.46□□□□□ -0.9
SLC38A9-220ENST00000513993 SPATA32Q96LK8 384 aa9.46□□□□□ -0.9
SLC38A9-220ENST00000513993 PLVAPQ9BX97 442 aa9.46□□□□□ -0.9
SLC38A9-220ENST00000513993 A0A0A0MRY4 1105 aa9.45□□□□□ -0.9
SLC38A9-220ENST00000513993 ZNF862O60290 1169 aa9.45□□□□□ -0.9
SLC38A9-220ENST00000513993 BPNT1O95861 308 aa9.45□□□□□ -0.9
SLC38A9-220ENST00000513993 MPP2Q14168 576 aa9.45□□□□□ -0.9
SLC38A9-220ENST00000513993 CCDC81Q6ZN84 652 aa9.45□□□□□ -0.9
SLC38A9-220ENST00000513993 MAP4K3Q8IVH8 894 aa9.45□□□□□ -0.9
SLC38A9-220ENST00000513993 SLITRK4Q8IW52 837 aa9.45□□□□□ -0.9
SLC38A9-220ENST00000513993 UBASH3BQ8TF42 649 aa9.45□□□□□ -0.9
SLC38A9-220ENST00000513993 BRMS1Q9HCU9 246 aa9.45□□□□□ -0.9
SLC38A9-220ENST00000513993 PPT2Q9UMR5 302 aa9.45□□□□□ -0.9
SLC38A9-220ENST00000513993 MRVI1Q9Y6F6 885 aa9.45□□□□□ -0.9
SLC38A9-220ENST00000513993 ROBO2Q9HCK4 1378 aa9.45□□□□□ -0.9
SLC38A9-220ENST00000513993 EIF4EBP3O60516 100 aaPredicted RBP9.44□□□□□ -0.9
SLC38A9-220ENST00000513993 ARHGEF15O94989 841 aa9.44□□□□□ -0.9
SLC38A9-220ENST00000513993 SSBP05455 408 aaKnown RBP eCLIP9.44□□□□□ -0.9
SLC38A9-220ENST00000513993 SELPP16109 830 aa9.44□□□□□ -0.9
SLC38A9-220ENST00000513993 SOX9P48436 509 aa9.44□□□□□ -0.9
SLC38A9-220ENST00000513993 INPP5AQ14642 412 aa9.44□□□□□ -0.9
SLC38A9-220ENST00000513993 CWF19L2Q2TBE0 894 aaKnown RBP9.44□□□□□ -0.9
SLC38A9-220ENST00000513993 REC114Q7Z4M0 266 aa9.44□□□□□ -0.9
SLC38A9-220ENST00000513993 CACNA2D2Q9NY47 1150 aa9.44□□□□□ -0.9
SLC38A9-220ENST00000513993 GRIN3BO60391 1043 aa9.43□□□□□ -0.9
SLC38A9-220ENST00000513993 RAC1P63000 192 aa9.43□□□□□ -0.9
SLC38A9-220ENST00000513993 RPL6Q02878 288 aaKnown RBP9.43□□□□□ -0.9
SLC38A9-220ENST00000513993 DIEXFQ68CQ4 756 aaKnown RBP9.43□□□□□ -0.9
SLC38A9-220ENST00000513993 GK5Q6ZS86 529 aa9.43□□□□□ -0.9
SLC38A9-220ENST00000513993 FBXO11Q86XK2 927 aa9.43□□□□□ -0.9
SLC38A9-220ENST00000513993 FMR1NBQ8N0W7 255 aaPredicted RBP9.43□□□□□ -0.9
SLC38A9-220ENST00000513993 DTWD1Q8N5C7 304 aa9.43□□□□□ -0.9
SLC38A9-220ENST00000513993 CPLX3Q8WVH0 158 aa9.43□□□□□ -0.9
SLC38A9-220ENST00000513993 LRRC3Q9BY71 257 aa9.43□□□□□ -0.9
SLC38A9-220ENST00000513993 KRT82Q9NSB4 513 aa9.43□□□□□ -0.9
SLC38A9-220ENST00000513993 CSADQ9Y600 493 aa9.43□□□□□ -0.9
SLC38A9-220ENST00000513993 DLL1O00548 723 aa9.42□□□□□ -0.9
SLC38A9-220ENST00000513993 STK10O94804 968 aaKnown RBP9.42□□□□□ -0.9
SLC38A9-220ENST00000513993 WISP1O95388 367 aa9.42□□□□□ -0.9
SLC38A9-220ENST00000513993 DUOXA2Q1HG44 320 aa9.42□□□□□ -0.9
SLC38A9-220ENST00000513993 WIPI1Q5MNZ9 446 aaPredicted RBP9.42□□□□□ -0.9
SLC38A9-220ENST00000513993 FBXW10Q5XX13 1052 aa9.42□□□□□ -0.9
SLC38A9-220ENST00000513993 LRFN4Q6PJG9 635 aa9.42□□□□□ -0.9
SLC38A9-220ENST00000513993 PLPPR2Q96GM1 343 aa9.42□□□□□ -0.9
SLC38A9-220ENST00000513993 DCDC2CA8MYV0 355 aa9.41□□□□□ -0.9
SLC38A9-220ENST00000513993 CLCQ05315 142 aa9.41□□□□□ -0.9
SLC38A9-220ENST00000513993 COL9A2Q14055 689 aaPredicted RBP9.41□□□□□ -0.9
SLC38A9-220ENST00000513993 SCARA3Q6AZY7 606 aa9.41□□□□□ -0.9
SLC38A9-220ENST00000513993 PMFBP1Q8TBY8 1022 aa9.41□□□□□ -0.9
SLC38A9-220ENST00000513993 RAD18Q9NS91 495 aa9.41□□□□□ -0.9
SLC38A9-220ENST00000513993 POLR3KQ9Y2Y1 108 aaPredicted RBP9.41□□□□□ -0.9
SLC38A9-220ENST00000513993 GNB5O14775 395 aa9.4□□□□□ -0.9
SLC38A9-220ENST00000513993 ETFBP38117 255 aa9.4□□□□□ -0.9
SLC38A9-220ENST00000513993 TRIM28Q13263 835 aaKnown RBP9.4□□□□□ -0.9
SLC38A9-220ENST00000513993 ELMO3Q96BJ8 720 aa9.4□□□□□ -0.9
SLC38A9-220ENST00000513993 ANAPC16Q96DE5 110 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms