RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 CCDC85BQ15834 202 aaPredicted RBP10.12□□□□□ -0.79
CLDND1-229ENST00000513988 ANKRD23Q86SG2 305 aa10.12□□□□□ -0.79
CLDND1-229ENST00000513988 ERO1BQ86YB8 467 aa10.12□□□□□ -0.79
CLDND1-229ENST00000513988 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.12□□□□□ -0.79
CLDND1-229ENST00000513988 HMX1Q9NP08 348 aaPredicted RBP10.12□□□□□ -0.79
CLDND1-229ENST00000513988 XDHP47989 1333 aa10.11□□□□□ -0.79
CLDND1-229ENST00000513988 MYO9BQ13459 2157 aa10.11□□□□□ -0.79
CLDND1-229ENST00000513988 ST18O60284 1047 aa10.11□□□□□ -0.79
CLDND1-229ENST00000513988 DIAPH1O60610 1272 aaKnown RBP10.11□□□□□ -0.79
CLDND1-229ENST00000513988 BCRP11274 1271 aa10.11□□□□□ -0.79
CLDND1-229ENST00000513988 COL6A1P12109 1028 aa10.11□□□□□ -0.79
CLDND1-229ENST00000513988 ATP2B4P23634 1241 aa10.11□□□□□ -0.79
CLDND1-229ENST00000513988 AAK1Q2M2I8 961 aa10.11□□□□□ -0.79
CLDND1-229ENST00000513988 RTF1Q92541 710 aaKnown RBP10.11□□□□□ -0.79
CLDND1-229ENST00000513988 ZNF428Q96B54 188 aa10.11□□□□□ -0.79
CLDND1-229ENST00000513988 PARK7Q99497 189 aaKnown RBP10.11□□□□□ -0.79
CLDND1-229ENST00000513988 ZNF576Q9H609 170 aa10.11□□□□□ -0.79
CLDND1-229ENST00000513988 CXXC1Q9P0U4 656 aaPredicted RBP10.11□□□□□ -0.79
CLDND1-229ENST00000513988 BAHCC1Q9P281 2608 aa10.1□□□□□ -0.79
CLDND1-229ENST00000513988 HMGCRP04035 888 aa10.1□□□□□ -0.79
CLDND1-229ENST00000513988 U2AF1L5P0DN76 240 aaPredicted RBP10.1□□□□□ -0.79
CLDND1-229ENST00000513988 U2AF1Q01081 240 aaKnown RBP eCLIP10.1□□□□□ -0.79
CLDND1-229ENST00000513988 PPIL2Q13356 520 aa10.1□□□□□ -0.79
CLDND1-229ENST00000513988 LCE2DQ5TA82 110 aaPredicted RBP10.1□□□□□ -0.79
CLDND1-229ENST00000513988 TTLL5Q6EMB2 1281 aa10.1□□□□□ -0.79
CLDND1-229ENST00000513988 MCM10Q7L590 875 aa10.1□□□□□ -0.79
CLDND1-229ENST00000513988 POLR3GLQ9BT43 218 aa10.1□□□□□ -0.79
CLDND1-229ENST00000513988 WDFY4Q6ZS81 3184 aa10.1□□□□□ -0.79
CLDND1-229ENST00000513988 MED23Q9ULK4 1368 aa10.1□□□□□ -0.79
CLDND1-229ENST00000513988 COL3A1P02461 1466 aaPredicted RBP10.1□□□□□ -0.79
CLDND1-229ENST00000513988 XIRP2A4UGR9 3374 aa10.09□□□□□ -0.79
CLDND1-229ENST00000513988 PRR33A8MZF0 331 aa10.09□□□□□ -0.79
CLDND1-229ENST00000513988 DNAJB2P25686 324 aa10.09□□□□□ -0.79
CLDND1-229ENST00000513988 TNFAIP1Q13829 316 aa10.09□□□□□ -0.79
CLDND1-229ENST00000513988 RIC3Q7Z5B4 369 aa10.09□□□□□ -0.79
CLDND1-229ENST00000513988 UIMC1Q96RL1 719 aa10.09□□□□□ -0.79
CLDND1-229ENST00000513988 COA1Q9GZY4 146 aa10.09□□□□□ -0.79
CLDND1-229ENST00000513988 OCEL1Q9H607 264 aa10.09□□□□□ -0.79
CLDND1-229ENST00000513988 PCDHAC2Q9Y5I4 1007 aa10.09□□□□□ -0.79
CLDND1-229ENST00000513988 SNCAIPQ9Y6H5 919 aa10.09□□□□□ -0.79
CLDND1-229ENST00000513988 LTBP2Q14767 1821 aa10.09□□□□□ -0.79
CLDND1-229ENST00000513988 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.08□□□□□ -0.8
CLDND1-229ENST00000513988 COA7Q96BR5 231 aa10.08□□□□□ -0.8
CLDND1-229ENST00000513988 FAM163AQ96GL9 167 aaPredicted RBP10.08□□□□□ -0.8
CLDND1-229ENST00000513988 RNPC3Q96LT9 517 aaKnown RBP10.08□□□□□ -0.8
CLDND1-229ENST00000513988 FBXL18Q96ME1 805 aa10.08□□□□□ -0.8
CLDND1-229ENST00000513988 THUMPD2Q9BTF0 503 aaKnown RBP10.08□□□□□ -0.8
CLDND1-229ENST00000513988 KCNH4Q9UQ05 1017 aa10.08□□□□□ -0.8
CLDND1-229ENST00000513988 CHD8Q9HCK8 2581 aa10.07□□□□□ -0.8
CLDND1-229ENST00000513988 MAST2Q6P0Q8 1798 aa10.07□□□□□ -0.8
CLDND1-229ENST00000513988 POTEMA6NI47 508 aa10.07□□□□□ -0.8
CLDND1-229ENST00000513988 U2SURPO15042 1029 aaKnown RBP10.07□□□□□ -0.8
CLDND1-229ENST00000513988 CYP2C8P10632 490 aa10.07□□□□□ -0.8
CLDND1-229ENST00000513988 IGFBP4P22692 258 aa10.07□□□□□ -0.8
CLDND1-229ENST00000513988 KCNQ1P51787 676 aa10.07□□□□□ -0.8
CLDND1-229ENST00000513988 TFF2Q03403 129 aa10.07□□□□□ -0.8
CLDND1-229ENST00000513988 CFAP100Q494V2 611 aa10.07□□□□□ -0.8
CLDND1-229ENST00000513988 FAM89AQ96GI7 184 aa10.07□□□□□ -0.8
CLDND1-229ENST00000513988 PRMT6Q96LA8 375 aaPredicted RBP10.07□□□□□ -0.8
CLDND1-229ENST00000513988 KCNH6Q9H252 994 aa10.07□□□□□ -0.8
CLDND1-229ENST00000513988 PRDM12Q9H4Q4 367 aa10.07□□□□□ -0.8
CLDND1-229ENST00000513988 SEC31BQ9NQW1 1179 aa10.07□□□□□ -0.8
CLDND1-229ENST00000513988 MIS18AQ9NYP9 233 aa10.07□□□□□ -0.8
CLDND1-229ENST00000513988 RBM5P52756 815 aaKnown RBP eCLIP10.06□□□□□ -0.8
CLDND1-229ENST00000513988 GTF2IP78347 998 aa10.06□□□□□ -0.8
CLDND1-229ENST00000513988 TRIM32Q13049 653 aa10.06□□□□□ -0.8
CLDND1-229ENST00000513988 PDAP1Q13442 181 aaKnown RBP10.06□□□□□ -0.8
CLDND1-229ENST00000513988 TAF7Q15545 349 aaPredicted RBP10.06□□□□□ -0.8
CLDND1-229ENST00000513988 CDAN1Q8IWY9 1227 aa10.06□□□□□ -0.8
CLDND1-229ENST00000513988 PDCD7Q8N8D1 485 aaKnown RBP10.06□□□□□ -0.8
CLDND1-229ENST00000513988 KHSRPQ92945 711 aaKnown RBP eCLIP10.06□□□□□ -0.88e-6■■■□□ 18.5
CLDND1-229ENST00000513988 TIFAQ96CG3 184 aa10.06□□□□□ -0.8
CLDND1-229ENST00000513988 WRNIP1Q96S55 665 aa10.06□□□□□ -0.8
CLDND1-229ENST00000513988 EPG5Q9HCE0 2579 aa10.06□□□□□ -0.8
CLDND1-229ENST00000513988 AOX1Q06278 1338 aa10.06□□□□□ -0.8
CLDND1-229ENST00000513988 DOCK3Q8IZD9 2030 aa10.06□□□□□ -0.8
CLDND1-229ENST00000513988 F8W031 263 aaPredicted RBP10.05□□□□□ -0.8
CLDND1-229ENST00000513988 PPATQ06203 517 aa10.05□□□□□ -0.8
CLDND1-229ENST00000513988 GOLGA2Q08379 1002 aa10.05□□□□□ -0.8
CLDND1-229ENST00000513988 RTL5Q5HYW3 569 aaPredicted RBP10.05□□□□□ -0.8
CLDND1-229ENST00000513988 POTEGQ6S5H5 508 aa10.05□□□□□ -0.8
CLDND1-229ENST00000513988 BADQ92934 168 aa10.05□□□□□ -0.8
CLDND1-229ENST00000513988 ZKSCAN4Q969J2 545 aaPredicted RBP10.05□□□□□ -0.8
CLDND1-229ENST00000513988 TEPSINQ96N21 525 aa10.05□□□□□ -0.8
CLDND1-229ENST00000513988 USP34Q70CQ2 3546 aa10.05□□□□□ -0.8
CLDND1-229ENST00000513988 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.04□□□□□ -0.8
CLDND1-229ENST00000513988 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.04□□□□□ -0.8
CLDND1-229ENST00000513988 PI4K2BG5E9Z4 385 aa10.04□□□□□ -0.8
CLDND1-229ENST00000513988 IRS4O14654 1257 aaPredicted RBP10.04□□□□□ -0.8
CLDND1-229ENST00000513988 AIMP1Q12904 312 aaKnown RBP10.04□□□□□ -0.8
CLDND1-229ENST00000513988 DCTN1Q14203 1278 aa10.04□□□□□ -0.8
CLDND1-229ENST00000513988 COPS6Q7L5N1 327 aa10.04□□□□□ -0.8
CLDND1-229ENST00000513988 LRP10Q7Z4F1 713 aa10.04□□□□□ -0.8
CLDND1-229ENST00000513988 PHACTR3Q96KR7 559 aa10.04□□□□□ -0.8
CLDND1-229ENST00000513988 SENP6Q9GZR1 1112 aaPredicted RBP10.04□□□□□ -0.8
CLDND1-229ENST00000513988 TMEM39BQ9GZU3 492 aa10.04□□□□□ -0.8
CLDND1-229ENST00000513988 PANK3Q9H999 370 aa10.04□□□□□ -0.8
CLDND1-229ENST00000513988 PRDM5Q9NQX1 630 aaPredicted RBP10.04□□□□□ -0.8
CLDND1-229ENST00000513988 C5orf42Q9H799 3197 aa10.04□□□□□ -0.8
CLDND1-229ENST00000513988 REV3LO60673 3130 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms