RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 MAP3K11Q16584 847 aa9.05□□□□□ -0.96
CHD1-209ENST00000512844 TTBK2Q6IQ55 1244 aa9.05□□□□□ -0.96
CHD1-209ENST00000512844 DZIP1LQ8IYY4 767 aaKnown RBP9.05□□□□□ -0.96
CHD1-209ENST00000512844 NOC4LQ9BVI4 516 aaKnown RBP9.05□□□□□ -0.96
CHD1-209ENST00000512844 TPSG1Q9NRR2 321 aa9.05□□□□□ -0.96
CHD1-209ENST00000512844 AOC2O75106 756 aa9.04□□□□□ -0.96
CHD1-209ENST00000512844 ECEL1O95672 775 aa9.04□□□□□ -0.96
CHD1-209ENST00000512844 LIG1P18858 919 aa9.04□□□□□ -0.96
CHD1-209ENST00000512844 RXRBP28702 533 aa9.04□□□□□ -0.96
CHD1-209ENST00000512844 KCNF1Q9H3M0 494 aa9.04□□□□□ -0.96
CHD1-209ENST00000512844 CCDC86Q9H6F5 360 aaKnown RBP9.04□□□□□ -0.96
CHD1-209ENST00000512844 USP31Q70CQ4 1352 aa9.03□□□□□ -0.96
CHD1-209ENST00000512844 PAGE1O75459 146 aa9.03□□□□□ -0.96
CHD1-209ENST00000512844 DLGAP3O95886 979 aa9.03□□□□□ -0.96
CHD1-209ENST00000512844 CTSHP09668 335 aa9.03□□□□□ -0.96
CHD1-209ENST00000512844 ADH5P11766 374 aa9.03□□□□□ -0.96
CHD1-209ENST00000512844 PREPP48147 710 aa9.03□□□□□ -0.96
CHD1-209ENST00000512844 SOX4Q06945 474 aaPredicted RBP9.03□□□□□ -0.96
CHD1-209ENST00000512844 PWP1Q13610 501 aa9.03□□□□□ -0.96
CHD1-209ENST00000512844 DYMQ7RTS9 669 aa9.03□□□□□ -0.96
CHD1-209ENST00000512844 TMEM87AQ8NBN3 555 aa9.03□□□□□ -0.96
CHD1-209ENST00000512844 UBL7Q96S82 380 aaPredicted RBP9.03□□□□□ -0.96
CHD1-209ENST00000512844 PICK1Q9NRD5 415 aa9.03□□□□□ -0.96
CHD1-209ENST00000512844 HIF3AQ9Y2N7 669 aa9.03□□□□□ -0.96
CHD1-209ENST00000512844 TRIM37O94972 964 aa9.02□□□□□ -0.97
CHD1-209ENST00000512844 CTSBP07858 339 aa9.02□□□□□ -0.97
CHD1-209ENST00000512844 RPS26P62854 115 aaKnown RBP9.02□□□□□ -0.97
CHD1-209ENST00000512844 MRPL58Q14197 206 aaKnown RBP9.02□□□□□ -0.97
CHD1-209ENST00000512844 TSNAXIP1Q2TAA8 658 aa9.02□□□□□ -0.97
CHD1-209ENST00000512844 SCARA3Q6AZY7 606 aa9.02□□□□□ -0.97
CHD1-209ENST00000512844 RELL1Q8IUW5 271 aa9.02□□□□□ -0.97
CHD1-209ENST00000512844 PIDD1Q9HB75 910 aa9.02□□□□□ -0.97
CHD1-209ENST00000512844 BMP3P12645 472 aa9.01□□□□□ -0.97
CHD1-209ENST00000512844 DRD2P14416 443 aa9.01□□□□□ -0.97
CHD1-209ENST00000512844 LIG3P49916 1009 aa9.01□□□□□ -0.97
CHD1-209ENST00000512844 ID3Q02535 119 aa9.01□□□□□ -0.97
CHD1-209ENST00000512844 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.01□□□□□ -0.97
CHD1-209ENST00000512844 PDZD3Q86UT5 571 aa9.01□□□□□ -0.97
CHD1-209ENST00000512844 STK35Q8TDR2 534 aa9.01□□□□□ -0.97
CHD1-209ENST00000512844 FAM46AQ96IP4 442 aaKnown RBP9.01□□□□□ -0.97
CHD1-209ENST00000512844 MYRFLQ96LU7 910 aa9.01□□□□□ -0.97
CHD1-209ENST00000512844 WDR18Q9BV38 432 aa9.01□□□□□ -0.97
CHD1-209ENST00000512844 SSBP4Q9BWG4 385 aaPredicted RBP9.01□□□□□ -0.97
CHD1-209ENST00000512844 TIAF1O95411 115 aa9□□□□□ -0.97
CHD1-209ENST00000512844 BMP6P22004 513 aa9□□□□□ -0.97
CHD1-209ENST00000512844 KIF4BQ2VIQ3 1234 aa9□□□□□ -0.97
CHD1-209ENST00000512844 HS2ST1Q7LGA3 356 aa9□□□□□ -0.97
CHD1-209ENST00000512844 GRIN3AQ8TCU5 1115 aa9□□□□□ -0.97
CHD1-209ENST00000512844 GPBAR1Q8TDU6 330 aa9□□□□□ -0.97
CHD1-209ENST00000512844 MIR1-1HGQ9H1L0 117 aa9□□□□□ -0.97
CHD1-209ENST00000512844 ATXN3LQ9H3M9 355 aa9□□□□□ -0.97
CHD1-209ENST00000512844 STOML1Q9UBI4 398 aa9□□□□□ -0.97
CHD1-209ENST00000512844 PCDHA4Q9UN74 947 aa9□□□□□ -0.97
CHD1-209ENST00000512844 SYNGAP1Q96PV0 1343 aa9□□□□□ -0.97
CHD1-209ENST00000512844 H2AFB1P0C5Y9 115 aa8.99□□□□□ -0.97
CHD1-209ENST00000512844 H2AFB2P0C5Z0 115 aa8.99□□□□□ -0.97
CHD1-209ENST00000512844 ASPAP45381 313 aa8.99□□□□□ -0.97
CHD1-209ENST00000512844 ZNF252P-AS1Q0IIN9 211 aa8.99□□□□□ -0.97
CHD1-209ENST00000512844 ELMO3Q96BJ8 720 aa8.99□□□□□ -0.97
CHD1-209ENST00000512844 MRRFQ96E11 262 aaKnown RBP8.99□□□□□ -0.97
CHD1-209ENST00000512844 RAXQ9Y2V3 346 aa8.99□□□□□ -0.97
CHD1-209ENST00000512844 ZNF862O60290 1169 aa8.98□□□□□ -0.97
CHD1-209ENST00000512844 FURINP09958 794 aa8.98□□□□□ -0.97
CHD1-209ENST00000512844 RAB6AP20340 208 aa8.98□□□□□ -0.97
CHD1-209ENST00000512844 GBP2P32456 591 aaPredicted RBP8.98□□□□□ -0.97
CHD1-209ENST00000512844 PRR23CQ6ZRP0 262 aa8.98□□□□□ -0.97
CHD1-209ENST00000512844 FAM20CQ8IXL6 584 aa8.98□□□□□ -0.97
CHD1-209ENST00000512844 MAP4P27816 1152 aaKnown RBP8.97□□□□□ -0.97
CHD1-209ENST00000512844 PAOXQ6QHF9 649 aa8.97□□□□□ -0.97
CHD1-209ENST00000512844 AGMOQ6ZNB7 445 aa8.97□□□□□ -0.97
CHD1-209ENST00000512844 BEND4Q6ZU67 534 aa8.97□□□□□ -0.97
CHD1-209ENST00000512844 C2CD4AQ8NCU7 369 aaPredicted RBP8.97□□□□□ -0.97
CHD1-209ENST00000512844 WDR89Q96FK6 387 aaPredicted RBP8.97□□□□□ -0.97
CHD1-209ENST00000512844 SSU72Q9NP77 194 aaKnown RBP8.97□□□□□ -0.97
CHD1-209ENST00000512844 GGT7Q9UJ14 662 aa8.97□□□□□ -0.97
CHD1-209ENST00000512844 ACTL7BQ9Y614 415 aa8.97□□□□□ -0.97
CHD1-209ENST00000512844 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.96□□□□□ -0.98
CHD1-209ENST00000512844 TMPRSS2O15393 492 aa8.96□□□□□ -0.98
CHD1-209ENST00000512844 GSC2O15499 205 aa8.96□□□□□ -0.98
CHD1-209ENST00000512844 VAMP1P23763 118 aa8.96□□□□□ -0.98
CHD1-209ENST00000512844 ZNF76P36508 570 aa8.96□□□□□ -0.98
CHD1-209ENST00000512844 MAP7Q14244 749 aa8.96□□□□□ -0.98
CHD1-209ENST00000512844 SGO2Q562F6 1265 aa8.96□□□□□ -0.98
CHD1-209ENST00000512844 CLEC10AQ8IUN9 316 aa8.96□□□□□ -0.98
CHD1-209ENST00000512844 ARMC10Q8N2F6 343 aa8.96□□□□□ -0.98
CHD1-209ENST00000512844 BACH2Q9BYV9 841 aa8.96□□□□□ -0.98
CHD1-209ENST00000512844 SEMA6BQ9H3T3 888 aa8.96□□□□□ -0.98
CHD1-209ENST00000512844 FAM95CA0A1B0GW59 222 aa8.95□□□□□ -0.98
CHD1-209ENST00000512844 K7ELQ4 463 aaPredicted RBP8.95□□□□□ -0.98
CHD1-209ENST00000512844 RNGTTO60942 597 aaKnown RBP8.95□□□□□ -0.98
CHD1-209ENST00000512844 NFKBIBQ15653 356 aa8.95□□□□□ -0.98
CHD1-209ENST00000512844 RSPO4Q2I0M5 234 aaPredicted RBP8.95□□□□□ -0.98
CHD1-209ENST00000512844 HDXQ7Z353 690 aa8.95□□□□□ -0.98
CHD1-209ENST00000512844 GIMAP7Q8NHV1 300 aa8.95□□□□□ -0.98
CHD1-209ENST00000512844 FBLIM1Q8WUP2 373 aa8.95□□□□□ -0.98
CHD1-209ENST00000512844 RSRP1Q9BUV0 290 aa8.95□□□□□ -0.98
CHD1-209ENST00000512844 CRIM1Q9NZV1 1036 aa8.95□□□□□ -0.98
CHD1-209ENST00000512844 PPP1R9AQ9ULJ8 1098 aa8.95□□□□□ -0.98
CHD1-209ENST00000512844 DYRK3O43781 588 aa8.94□□□□□ -0.98
CHD1-209ENST00000512844 BPNT1O95861 308 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms