RNA–Protein interactions for RNA: ENST00000512713.5

YIPF3-216, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 306 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-216ENST00000512713 SPEF2Q9C093 1822 aa11.35□□□□□ -0.59
YIPF3-216ENST00000512713 IGF2BP3O00425 579 aaKnown RBP eCLIP11.35□□□□□ -0.59
YIPF3-216ENST00000512713 RGS19P49795 217 aa11.35□□□□□ -0.59
YIPF3-216ENST00000512713 RASGRF1Q13972 1273 aa11.35□□□□□ -0.59
YIPF3-216ENST00000512713 TMEM57Q8N5G2 664 aa11.35□□□□□ -0.59
YIPF3-216ENST00000512713 OTUD5Q96G74 571 aa11.35□□□□□ -0.59
YIPF3-216ENST00000512713 XAGE2Q96GT9 111 aa11.35□□□□□ -0.59
YIPF3-216ENST00000512713 ABCF2Q9UG63 623 aa11.35□□□□□ -0.59
YIPF3-216ENST00000512713 PDS5AQ29RF7 1337 aaKnown RBP11.35□□□□□ -0.59
YIPF3-216ENST00000512713 TESPA1A2RU30 521 aaPredicted RBP11.34□□□□□ -0.59
YIPF3-216ENST00000512713 GJA5P36382 358 aa11.34□□□□□ -0.59
YIPF3-216ENST00000512713 TCP10Q12799 353 aa11.34□□□□□ -0.59
YIPF3-216ENST00000512713 OS9Q13438 667 aaPredicted RBP11.34□□□□□ -0.59
YIPF3-216ENST00000512713 ERO1BQ86YB8 467 aa11.34□□□□□ -0.59
YIPF3-216ENST00000512713 ZNF341Q9BYN7 854 aa11.34□□□□□ -0.59
YIPF3-216ENST00000512713 R3HDMLQ9H3Y0 253 aa11.34□□□□□ -0.59
YIPF3-216ENST00000512713 TNNQ9UQP3 1299 aa11.34□□□□□ -0.59
YIPF3-216ENST00000512713 PSME4Q14997 1843 aa11.34□□□□□ -0.59
YIPF3-216ENST00000512713 CCL15-CCL14A0A0B4J2E2 113 aa11.33□□□□□ -0.6
YIPF3-216ENST00000512713 PNMA6EA0A0J9YXQ4 647 aa11.33□□□□□ -0.6
YIPF3-216ENST00000512713 SPDYE5A6NIY4 337 aa11.33□□□□□ -0.6
YIPF3-216ENST00000512713 CETPP11597 493 aa11.33□□□□□ -0.6
YIPF3-216ENST00000512713 CRHR2Q13324 411 aa11.33□□□□□ -0.6
YIPF3-216ENST00000512713 SNAPC2Q13487 334 aa11.33□□□□□ -0.6
YIPF3-216ENST00000512713 ARHGEF6Q15052 776 aa11.33□□□□□ -0.6
YIPF3-216ENST00000512713 CCL15Q16663 113 aa11.33□□□□□ -0.6
YIPF3-216ENST00000512713 MIGA2Q7L4E1 593 aa11.33□□□□□ -0.6
YIPF3-216ENST00000512713 ITPRIPQ8IWB1 547 aa11.33□□□□□ -0.6
YIPF3-216ENST00000512713 ZKSCAN4Q969J2 545 aaPredicted RBP11.33□□□□□ -0.6
YIPF3-216ENST00000512713 MS4A4AQ96JQ5 239 aa11.33□□□□□ -0.6
YIPF3-216ENST00000512713 PTPN18Q99952 460 aa11.33□□□□□ -0.6
YIPF3-216ENST00000512713 HPS5Q9UPZ3 1129 aa11.33□□□□□ -0.6
YIPF3-216ENST00000512713 UQCRFS1P1P0C7P4 283 aa11.32□□□□□ -0.6
YIPF3-216ENST00000512713 GSTO1P78417 241 aa11.32□□□□□ -0.6
YIPF3-216ENST00000512713 ATP8B2P98198 1209 aa11.32□□□□□ -0.6
YIPF3-216ENST00000512713 NFIAQ12857 509 aa11.32□□□□□ -0.6
YIPF3-216ENST00000512713 FBXO46Q6PJ61 603 aaPredicted RBP11.32□□□□□ -0.6
YIPF3-216ENST00000512713 ERICH6Q7L0X2 663 aa11.32□□□□□ -0.6
YIPF3-216ENST00000512713 ZSCAN29Q8IWY8 852 aaPredicted RBP11.32□□□□□ -0.6
YIPF3-216ENST00000512713 SPATA5Q8NB90 893 aa11.32□□□□□ -0.6
YIPF3-216ENST00000512713 CNKSR2Q8WXI2 1034 aa11.32□□□□□ -0.6
YIPF3-216ENST00000512713 BRI3BPQ8WY22 251 aa11.32□□□□□ -0.6
YIPF3-216ENST00000512713 FAM163AQ96GL9 167 aaPredicted RBP11.32□□□□□ -0.6
YIPF3-216ENST00000512713 ERO1AQ96HE7 468 aa11.32□□□□□ -0.6
YIPF3-216ENST00000512713 ZFYVE28Q9HCC9 887 aa11.32□□□□□ -0.6
YIPF3-216ENST00000512713 ZBED9Q6R2W3 1325 aa11.32□□□□□ -0.6
YIPF3-216ENST00000512713 RPAP1Q9BWH6 1393 aaPredicted RBP11.31□□□□□ -0.6
YIPF3-216ENST00000512713 IRF6O14896 467 aa11.31□□□□□ -0.6
YIPF3-216ENST00000512713 ENTPD3O75355 529 aa11.31□□□□□ -0.6
YIPF3-216ENST00000512713 SURF6O75683 361 aaKnown RBP11.31□□□□□ -0.6
YIPF3-216ENST00000512713 LDHCP07864 332 aa11.31□□□□□ -0.6
YIPF3-216ENST00000512713 SP3Q02447 781 aa11.31□□□□□ -0.6
YIPF3-216ENST00000512713 MECOMQ03112 1051 aa11.31□□□□□ -0.6
YIPF3-216ENST00000512713 PPATQ06203 517 aa11.31□□□□□ -0.6
YIPF3-216ENST00000512713 TAF1CQ15572 869 aaPredicted RBP11.31□□□□□ -0.6
YIPF3-216ENST00000512713 CCDC158Q5M9N0 1113 aa11.31□□□□□ -0.6
YIPF3-216ENST00000512713 IDI2Q9BXS1 227 aa11.31□□□□□ -0.6
YIPF3-216ENST00000512713 RAI14Q9P0K7 980 aa11.31□□□□□ -0.6
YIPF3-216ENST00000512713 HMG20BQ9P0W2 317 aa11.31□□□□□ -0.6
YIPF3-216ENST00000512713 FAM198AQ9UFP1 575 aa11.31□□□□□ -0.6
YIPF3-216ENST00000512713 TRIM17Q9Y577 477 aa11.31□□□□□ -0.6
YIPF3-216ENST00000512713 SNCAIPQ9Y6H5 919 aa11.31□□□□□ -0.6
YIPF3-216ENST00000512713 GAKO14976 1311 aa11.31□□□□□ -0.6
YIPF3-216ENST00000512713 ZBTB7BO15156 539 aaPredicted RBP11.3□□□□□ -0.6
YIPF3-216ENST00000512713 MS4A1P11836 297 aa11.3□□□□□ -0.6
YIPF3-216ENST00000512713 BTDP43251 543 aa11.3□□□□□ -0.6
YIPF3-216ENST00000512713 RGS3P49796 1198 aa11.3□□□□□ -0.6
YIPF3-216ENST00000512713 SOX10P56693 466 aa11.3□□□□□ -0.6
YIPF3-216ENST00000512713 PPIL2Q13356 520 aa11.3□□□□□ -0.6
YIPF3-216ENST00000512713 POLA2Q14181 598 aa11.3□□□□□ -0.6
YIPF3-216ENST00000512713 SSH3Q8TE77 659 aa11.3□□□□□ -0.6
YIPF3-216ENST00000512713 NOL10Q9BSC4 688 aaKnown RBP11.3□□□□□ -0.6
YIPF3-216ENST00000512713 ZCCHC17Q9NP64 241 aaKnown RBP11.3□□□□□ -0.6
YIPF3-216ENST00000512713 GPR108Q9NPR9 543 aa11.3□□□□□ -0.6
YIPF3-216ENST00000512713 LRP2BPQ9P2M1 347 aa11.3□□□□□ -0.6
YIPF3-216ENST00000512713 POLR2AP24928 1970 aaKnown RBP11.29□□□□□ -0.6
YIPF3-216ENST00000512713 GPR75-ASB3A0A0A6YYF3 556 aa11.29□□□□□ -0.6
YIPF3-216ENST00000512713 MAP4K4O95819 1239 aaPredicted RBP11.29□□□□□ -0.6
YIPF3-216ENST00000512713 ARID4AP29374 1257 aaPredicted RBP11.29□□□□□ -0.6
YIPF3-216ENST00000512713 INPP5BP32019 993 aa11.29□□□□□ -0.6
YIPF3-216ENST00000512713 TNNI3KQ59H18 835 aa11.29□□□□□ -0.6
YIPF3-216ENST00000512713 TTC39AQ5SRH9 613 aa11.29□□□□□ -0.6
YIPF3-216ENST00000512713 OTOP1Q7RTM1 612 aa11.29□□□□□ -0.6
YIPF3-216ENST00000512713 FAM43AQ8N2R8 423 aa11.29□□□□□ -0.6
YIPF3-216ENST00000512713 EFCC1Q9HA90 598 aa11.29□□□□□ -0.6
YIPF3-216ENST00000512713 PICK1Q9NRD5 415 aa11.29□□□□□ -0.6
YIPF3-216ENST00000512713 ZNF112Q9UJU3 913 aa11.29□□□□□ -0.6
YIPF3-216ENST00000512713 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.29□□□□□ -0.6
YIPF3-216ENST00000512713 FPGT-TNNI3KV9GXZ4 949 aa11.29□□□□□ -0.6
YIPF3-216ENST00000512713 MROH7-TTC4A0A0A0MT08 1334 aa11.29□□□□□ -0.6
YIPF3-216ENST00000512713 ZNF646O15015 1829 aaPredicted RBP11.28□□□□□ -0.6
YIPF3-216ENST00000512713 RLBP1P12271 317 aa11.28□□□□□ -0.6
YIPF3-216ENST00000512713 PICALMQ13492 652 aa11.28□□□□□ -0.6
YIPF3-216ENST00000512713 KIF22Q14807 665 aa11.28□□□□□ -0.6
YIPF3-216ENST00000512713 NOL9Q5SY16 702 aaKnown RBP11.28□□□□□ -0.6
YIPF3-216ENST00000512713 PI16Q6UXB8 463 aa11.28□□□□□ -0.6
YIPF3-216ENST00000512713 TBC1D9Q6ZT07 1266 aa11.28□□□□□ -0.6
YIPF3-216ENST00000512713 ZFPM1Q8IX07 1006 aa11.28□□□□□ -0.6
YIPF3-216ENST00000512713 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.28□□□□□ -0.6
YIPF3-216ENST00000512713 CD99L2Q8TCZ2 262 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms