RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 GRIK5Q16478 980 aa11.79□□□□□ -0.52
NUP54-211ENST00000512151 GPAT2Q6NUI2 795 aa11.79□□□□□ -0.52
NUP54-211ENST00000512151 MAFAQ8NHW3 353 aaPredicted RBP11.79□□□□□ -0.52
NUP54-211ENST00000512151 KCNH4Q9UQ05 1017 aa11.79□□□□□ -0.52
NUP54-211ENST00000512151 DDX60LQ5H9U9 1706 aaKnown RBP11.78□□□□□ -0.52
NUP54-211ENST00000512151 PLA2G5P39877 138 aa11.78□□□□□ -0.52
NUP54-211ENST00000512151 PXYLP1Q8TE99 480 aa11.78□□□□□ -0.52
NUP54-211ENST00000512151 CDX2Q99626 313 aaPredicted RBP11.78□□□□□ -0.52
NUP54-211ENST00000512151 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.78□□□□□ -0.52
NUP54-211ENST00000512151 SERPINA10Q9UK55 444 aa11.78□□□□□ -0.52
NUP54-211ENST00000512151 TTF2Q9UNY4 1162 aaKnown RBP11.78□□□□□ -0.52
NUP54-211ENST00000512151 TRIM35Q9UPQ4 493 aa11.78□□□□□ -0.52
NUP54-211ENST00000512151 FAM205AQ6ZU69 1335 aa11.77□□□□□ -0.53
NUP54-211ENST00000512151 CAPN2P17655 700 aa11.77□□□□□ -0.53
NUP54-211ENST00000512151 PPATQ06203 517 aa11.77□□□□□ -0.53
NUP54-211ENST00000512151 LMOD3Q0VAK6 560 aa11.77□□□□□ -0.53
NUP54-211ENST00000512151 IRF5Q13568 498 aa11.77□□□□□ -0.53
NUP54-211ENST00000512151 NEUROD2Q15784 382 aa11.77□□□□□ -0.53
NUP54-211ENST00000512151 CWF19L2Q2TBE0 894 aaKnown RBP11.77□□□□□ -0.53
NUP54-211ENST00000512151 ZNF804AQ7Z570 1209 aa11.77□□□□□ -0.53
NUP54-211ENST00000512151 PNNQ9H307 717 aaKnown RBP11.77□□□□□ -0.53
NUP54-211ENST00000512151 MAP3K2Q9Y2U5 619 aa11.77□□□□□ -0.53
NUP54-211ENST00000512151 EYSQ5T1H1 3165 aa11.77□□□□□ -0.53
NUP54-211ENST00000512151 PFASO15067 1338 aa11.76□□□□□ -0.53
NUP54-211ENST00000512151 CRKP46108 304 aa11.76□□□□□ -0.53
NUP54-211ENST00000512151 TNNI2P48788 182 aa11.76□□□□□ -0.53
NUP54-211ENST00000512151 MDM2Q00987 491 aaPredicted RBP11.76□□□□□ -0.53
NUP54-211ENST00000512151 TRIM32Q13049 653 aa11.76□□□□□ -0.53
NUP54-211ENST00000512151 MFSD14BQ5SR56 506 aa11.76□□□□□ -0.53
NUP54-211ENST00000512151 UBE3BQ7Z3V4 1068 aa11.76□□□□□ -0.53
NUP54-211ENST00000512151 ANKLE1Q8NAG6 615 aa11.76□□□□□ -0.53
NUP54-211ENST00000512151 PARK7Q99497 189 aaKnown RBP11.76□□□□□ -0.53
NUP54-211ENST00000512151 MPHOSPH8Q99549 860 aa11.76□□□□□ -0.53
NUP54-211ENST00000512151 NBPF3Q9H094 633 aa11.76□□□□□ -0.53
NUP54-211ENST00000512151 C11orf49Q9H6J7 331 aa11.76□□□□□ -0.53
NUP54-211ENST00000512151 PRUNE2Q8WUY3 3088 aa11.75□□□□□ -0.53
NUP54-211ENST00000512151 H7C1W4 665 aa11.75□□□□□ -0.53
NUP54-211ENST00000512151 MIGA2Q7L4E1 593 aa11.75□□□□□ -0.53
NUP54-211ENST00000512151 MBIPQ9NS73 344 aa11.75□□□□□ -0.53
NUP54-211ENST00000512151 TAOK2Q9UL54 1235 aa11.75□□□□□ -0.53
NUP54-211ENST00000512151 ELL2O00472 640 aaPredicted RBP11.74□□□□□ -0.53
NUP54-211ENST00000512151 CSF1RP07333 972 aa11.74□□□□□ -0.53
NUP54-211ENST00000512151 CASP7P55210 303 aa11.74□□□□□ -0.53
NUP54-211ENST00000512151 ZNF697Q5TEC3 545 aa11.74□□□□□ -0.53
NUP54-211ENST00000512151 MYLIPQ8WY64 445 aa11.74□□□□□ -0.53
NUP54-211ENST00000512151 PLA2G12BQ9BX93 195 aa11.74□□□□□ -0.53
NUP54-211ENST00000512151 NEURL1BA8MQ27 555 aa11.73□□□□□ -0.53
NUP54-211ENST00000512151 TNPO2O14787 897 aaKnown RBP11.73□□□□□ -0.53
NUP54-211ENST00000512151 CCDC146Q8IYE0 955 aa11.73□□□□□ -0.53
NUP54-211ENST00000512151 TDRD7Q8NHU6 1098 aaKnown RBP11.73□□□□□ -0.53
NUP54-211ENST00000512151 FAM122AQ96E09 287 aa11.73□□□□□ -0.53
NUP54-211ENST00000512151 SEMA6BQ9H3T3 888 aa11.73□□□□□ -0.53
NUP54-211ENST00000512151 PI4KAP2A4QPH2 592 aa11.72□□□□□ -0.53
NUP54-211ENST00000512151 TNFRSF10AO00220 468 aa11.72□□□□□ -0.53
NUP54-211ENST00000512151 PITPNM1O00562 1244 aa11.72□□□□□ -0.53
NUP54-211ENST00000512151 GABBR2O75899 941 aa11.72□□□□□ -0.53
NUP54-211ENST00000512151 LRRC26Q2I0M4 334 aa11.72□□□□□ -0.53
NUP54-211ENST00000512151 PI4KAP1Q8N8J0 262 aa11.72□□□□□ -0.53
NUP54-211ENST00000512151 SYMPKQ92797 1274 aaKnown RBP11.72□□□□□ -0.53
NUP54-211ENST00000512151 ZNF341Q9BYN7 854 aa11.72□□□□□ -0.53
NUP54-211ENST00000512151 ZNF112Q9UJU3 913 aa11.72□□□□□ -0.53
NUP54-211ENST00000512151 OGDHLQ9ULD0 1010 aa11.72□□□□□ -0.53
NUP54-211ENST00000512151 MUC3AQ02505 3323 aa11.71□□□□□ -0.53
NUP54-211ENST00000512151 GYG1P46976 350 aa11.71□□□□□ -0.53
NUP54-211ENST00000512151 KSR2Q6VAB6 950 aa11.71□□□□□ -0.53
NUP54-211ENST00000512151 TTYH1Q9H313 450 aaPredicted RBP11.71□□□□□ -0.53
NUP54-211ENST00000512151 RPAP1Q9BWH6 1393 aaPredicted RBP11.7□□□□□ -0.54
NUP54-211ENST00000512151 PLIN1O60240 522 aa11.7□□□□□ -0.54
NUP54-211ENST00000512151 DDX58O95786 925 aaKnown RBP11.7□□□□□ -0.54
NUP54-211ENST00000512151 HMGCRP04035 888 aa11.7□□□□□ -0.54
NUP54-211ENST00000512151 ZNF853P0CG23 659 aa11.7□□□□□ -0.54
NUP54-211ENST00000512151 COL6A1P12109 1028 aa11.7□□□□□ -0.54
NUP54-211ENST00000512151 NOL9Q5SY16 702 aaKnown RBP11.7□□□□□ -0.54
NUP54-211ENST00000512151 DCAF15Q66K64 600 aa11.7□□□□□ -0.54
NUP54-211ENST00000512151 APOBEC3HQ6NTF7 200 aaKnown RBP11.7□□□□□ -0.54
NUP54-211ENST00000512151 FAM83AQ86UY5 434 aa11.7□□□□□ -0.54
NUP54-211ENST00000512151 C8orf58Q8NAV2 365 aa11.7□□□□□ -0.54
NUP54-211ENST00000512151 USP38Q8NB14 1042 aa11.7□□□□□ -0.54
NUP54-211ENST00000512151 LAMA2P24043 3122 aaKnown RBP11.7□□□□□ -0.54
NUP54-211ENST00000512151 TMEM265A0A087WTH1 108 aa11.69□□□□□ -0.54
NUP54-211ENST00000512151 ANKRD18BA2A2Z9 1011 aa11.69□□□□□ -0.54
NUP54-211ENST00000512151 CXCL11O14625 94 aa11.69□□□□□ -0.54
NUP54-211ENST00000512151 FAM84BQ96KN1 310 aaPredicted RBP11.69□□□□□ -0.54
NUP54-211ENST00000512151 A0A0G2JLL6 359 aaPredicted RBP11.68□□□□□ -0.54
NUP54-211ENST00000512151 GCKRQ14397 625 aa11.68□□□□□ -0.54
NUP54-211ENST00000512151 TJAP1Q5JTD0 557 aa11.68□□□□□ -0.54
NUP54-211ENST00000512151 FKBP1CQ5VVH2 108 aa11.68□□□□□ -0.54
NUP54-211ENST00000512151 PRRT2Q7Z6L0 340 aaPredicted RBP11.68□□□□□ -0.54
NUP54-211ENST00000512151 ANKRD13CQ8N6S4 541 aa11.68□□□□□ -0.54
NUP54-211ENST00000512151 COA7Q96BR5 231 aa11.68□□□□□ -0.54
NUP54-211ENST00000512151 ZNF594Q96JF6 807 aaPredicted RBP11.68□□□□□ -0.54
NUP54-211ENST00000512151 ZDHHC15Q96MV8 337 aa11.68□□□□□ -0.54
NUP54-211ENST00000512151 HMX1Q9NP08 348 aaPredicted RBP11.68□□□□□ -0.54
NUP54-211ENST00000512151 GJD2Q9UKL4 321 aa11.68□□□□□ -0.54
NUP54-211ENST00000512151 IQSEC3Q9UPP2 1182 aaPredicted RBP11.68□□□□□ -0.54
NUP54-211ENST00000512151 PLXNB2O15031 1838 aa11.68□□□□□ -0.54
NUP54-211ENST00000512151 NCOR1O75376 2440 aa11.68□□□□□ -0.54
NUP54-211ENST00000512151 PTPRFP10586 1907 aa11.68□□□□□ -0.54
NUP54-211ENST00000512151 FOSL2P15408 326 aa11.67□□□□□ -0.54
NUP54-211ENST00000512151 FOXO4P98177 505 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms