RNA–Protein interactions for RNA: ENST00000512040.1

MATR3-219, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-219ENST00000512040 ANAPC4Q9UJX5 808 aa5.4□□□□□ -1.54
MATR3-219ENST00000512040 AKAP2Q9Y2D5 859 aa5.4□□□□□ -1.54
MATR3-219ENST00000512040 THRAP3Q9Y2W1 955 aaKnown RBP5.4□□□□□ -1.54
MATR3-219ENST00000512040 MRVI1Q9Y6F6 885 aa5.4□□□□□ -1.54
MATR3-219ENST00000512040 SIAH2O43255 324 aa5.39□□□□□ -1.55
MATR3-219ENST00000512040 GIGYF1O75420 1035 aaPredicted RBP5.39□□□□□ -1.55
MATR3-219ENST00000512040 ALDH1A1P00352 501 aa5.39□□□□□ -1.55
MATR3-219ENST00000512040 FSHRP23945 695 aa5.39□□□□□ -1.55
MATR3-219ENST00000512040 FLT3P36888 993 aa5.39□□□□□ -1.55
MATR3-219ENST00000512040 CD151P48509 253 aa5.39□□□□□ -1.55
MATR3-219ENST00000512040 SLC15A2Q16348 729 aa5.39□□□□□ -1.55
MATR3-219ENST00000512040 DDB1Q16531 1140 aa5.39□□□□□ -1.55
MATR3-219ENST00000512040 SLFNL1Q499Z3 407 aa5.39□□□□□ -1.55
MATR3-219ENST00000512040 HSP90B2PQ58FF3 399 aa5.39□□□□□ -1.55
MATR3-219ENST00000512040 NOM1Q5C9Z4 860 aaKnown RBP5.39□□□□□ -1.55
MATR3-219ENST00000512040 LCE2CQ5TA81 110 aa5.39□□□□□ -1.55
MATR3-219ENST00000512040 CCSAPQ6IQ19 270 aaPredicted RBP5.39□□□□□ -1.55
MATR3-219ENST00000512040 NT5DC4Q86YG4 428 aa5.39□□□□□ -1.55
MATR3-219ENST00000512040 RNF135Q8IUD6 432 aa5.39□□□□□ -1.55
MATR3-219ENST00000512040 NLGN2Q8NFZ4 835 aa5.39□□□□□ -1.55
MATR3-219ENST00000512040 RUNDC1Q96C34 613 aa5.39□□□□□ -1.55
MATR3-219ENST00000512040 KCTD15Q96SI1 283 aaPredicted RBP5.39□□□□□ -1.55
MATR3-219ENST00000512040 CDC5LQ99459 802 aaKnown RBP5.39□□□□□ -1.55
MATR3-219ENST00000512040 RETREG1Q9H6L5 497 aa5.39□□□□□ -1.55
MATR3-219ENST00000512040 CASS4Q9NQ75 786 aa5.39□□□□□ -1.55
MATR3-219ENST00000512040 ODF2LQ9ULJ1 636 aa5.39□□□□□ -1.55
MATR3-219ENST00000512040 SMC3Q9UQE7 1217 aa5.39□□□□□ -1.55
MATR3-219ENST00000512040 TTC21AQ8NDW8 1320 aa5.39□□□□□ -1.55
MATR3-219ENST00000512040 MAP2P11137 1827 aaKnown RBP5.39□□□□□ -1.55
MATR3-219ENST00000512040 UBR3Q6ZT12 1888 aa5.39□□□□□ -1.55
MATR3-219ENST00000512040 MEGF6O75095 1541 aa5.38□□□□□ -1.55
MATR3-219ENST00000512040 TTC24A2A3L6 582 aaPredicted RBP5.38□□□□□ -1.55
MATR3-219ENST00000512040 GDF9O60383 454 aa5.38□□□□□ -1.55
MATR3-219ENST00000512040 HMMRO75330 724 aa5.38□□□□□ -1.55
MATR3-219ENST00000512040 FGAP02671 866 aa5.38□□□□□ -1.55
MATR3-219ENST00000512040 HSP90AB1P08238 724 aaKnown RBP5.38□□□□□ -1.55
MATR3-219ENST00000512040 SKIP12755 728 aa5.38□□□□□ -1.55
MATR3-219ENST00000512040 MARSP56192 900 aaKnown RBP5.38□□□□□ -1.55
MATR3-219ENST00000512040 UBE4AQ14139 1066 aa5.38□□□□□ -1.55
MATR3-219ENST00000512040 CCDC184Q52MB2 194 aa5.38□□□□□ -1.55
MATR3-219ENST00000512040 RNF187Q5TA31 235 aaPredicted RBP5.38□□□□□ -1.55
MATR3-219ENST00000512040 TBC1D9Q6ZT07 1266 aa5.38□□□□□ -1.55
MATR3-219ENST00000512040 KRT77Q7Z794 578 aa5.38□□□□□ -1.55
MATR3-219ENST00000512040 ARHGEF25Q86VW2 580 aa5.38□□□□□ -1.55
MATR3-219ENST00000512040 ZSCAN30Q86W11 494 aa5.38□□□□□ -1.55
MATR3-219ENST00000512040 CYP4X1Q8N118 509 aa5.38□□□□□ -1.55
MATR3-219ENST00000512040 ZSCAN1Q8NBB4 408 aa5.38□□□□□ -1.55
MATR3-219ENST00000512040 KCNH5Q8NCM2 988 aa5.38□□□□□ -1.55
MATR3-219ENST00000512040 RELTQ969Z4 430 aa5.38□□□□□ -1.55
MATR3-219ENST00000512040 IL17RAQ96F46 866 aa5.38□□□□□ -1.55
MATR3-219ENST00000512040 ACSBG1Q96GR2 724 aa5.38□□□□□ -1.55
MATR3-219ENST00000512040 PAIP2Q9BPZ3 127 aaKnown RBP5.38□□□□□ -1.55
MATR3-219ENST00000512040 CDV3Q9UKY7 258 aaKnown RBP5.38□□□□□ -1.55
MATR3-219ENST00000512040 PRR12Q9ULL5 1215 aa5.38□□□□□ -1.55
MATR3-219ENST00000512040 MAP4K5Q9Y4K4 846 aa5.38□□□□□ -1.55
MATR3-219ENST00000512040 COL4A3BPQ9Y5P4 624 aa5.38□□□□□ -1.55
MATR3-219ENST00000512040 PNPLA7Q6ZV29 1317 aa5.38□□□□□ -1.55
MATR3-219ENST00000512040 FANCIQ9NVI1 1328 aa5.38□□□□□ -1.55
MATR3-219ENST00000512040 ADCY9O60503 1353 aa5.38□□□□□ -1.55
MATR3-219ENST00000512040 CICQ96RK0 1608 aaPredicted RBP5.37□□□□□ -1.55
MATR3-219ENST00000512040 ITGB4P16144 1822 aa5.37□□□□□ -1.55
MATR3-219ENST00000512040 ADH1CP00326 375 aa5.37□□□□□ -1.55
MATR3-219ENST00000512040 NEFHP12036 1026 aa5.37□□□□□ -1.55
MATR3-219ENST00000512040 YBX3P16989 372 aaKnown RBP eCLIP5.37□□□□□ -1.55
MATR3-219ENST00000512040 KCNQ4P56696 695 aa5.37□□□□□ -1.55
MATR3-219ENST00000512040 DHX8Q14562 1220 aaKnown RBP5.37□□□□□ -1.55
MATR3-219ENST00000512040 TCEAL1Q15170 157 aa5.37□□□□□ -1.55
MATR3-219ENST00000512040 CCDC144BQ3MJ40 725 aa5.37□□□□□ -1.55
MATR3-219ENST00000512040 INTS6LQ5JSJ4 861 aaKnown RBP5.37□□□□□ -1.55
MATR3-219ENST00000512040 B4GALNT3Q6L9W6 998 aa5.37□□□□□ -1.55
MATR3-219ENST00000512040 TRIM67Q6ZTA4 783 aa5.37□□□□□ -1.55
MATR3-219ENST00000512040 TOM1L2Q6ZVM7 507 aa5.37□□□□□ -1.55
MATR3-219ENST00000512040 HDGFL2Q7Z4V5 671 aaPredicted RBP5.37□□□□□ -1.55
MATR3-219ENST00000512040 CATIPQ7Z7H3 387 aa5.37□□□□□ -1.55
MATR3-219ENST00000512040 RPUSD2Q8IZ73 545 aaKnown RBP5.37□□□□□ -1.55
MATR3-219ENST00000512040 MPNDQ8N594 471 aa5.37□□□□□ -1.55
MATR3-219ENST00000512040 SNIP1Q8TAD8 396 aaKnown RBP5.37□□□□□ -1.55
MATR3-219ENST00000512040 RSPH1Q8WYR4 309 aa5.37□□□□□ -1.55
MATR3-219ENST00000512040 CDK15Q96Q40 435 aa5.37□□□□□ -1.55
MATR3-219ENST00000512040 PPP1R12CQ9BZL4 782 aa5.37□□□□□ -1.55
MATR3-219ENST00000512040 MTFR1LQ9H019 292 aa5.37□□□□□ -1.55
MATR3-219ENST00000512040 RANBP17Q9H2T7 1088 aaKnown RBP5.37□□□□□ -1.55
MATR3-219ENST00000512040 CABP1Q9NZU7 370 aa5.37□□□□□ -1.55
MATR3-219ENST00000512040 TFIP11Q9UBB9 837 aaKnown RBP5.37□□□□□ -1.55
MATR3-219ENST00000512040 NOL7Q9UMY1 257 aaKnown RBP5.37□□□□□ -1.55
MATR3-219ENST00000512040 WASF2Q9Y6W5 498 aa5.37□□□□□ -1.55
MATR3-219ENST00000512040 TTC21BQ7Z4L5 1316 aa5.37□□□□□ -1.55
MATR3-219ENST00000512040 KTN1Q86UP2 1357 aaKnown RBP5.37□□□□□ -1.55
MATR3-219ENST00000512040 EDC4Q6P2E9 1401 aaKnown RBP5.37□□□□□ -1.55
MATR3-219ENST00000512040 BRCA1P38398 1863 aaKnown RBP5.37□□□□□ -1.55
MATR3-219ENST00000512040 PALM3A6NDB9 673 aaPredicted RBP5.36□□□□□ -1.55
MATR3-219ENST00000512040 TMEM88BA6NKF7 163 aa5.36□□□□□ -1.55
MATR3-219ENST00000512040 ESPNB1AK53 854 aa5.36□□□□□ -1.55
MATR3-219ENST00000512040 J3QL48 77 aa5.36□□□□□ -1.55
MATR3-219ENST00000512040 COQ9O75208 318 aa5.36□□□□□ -1.55
MATR3-219ENST00000512040 S100BP04271 92 aaPredicted RBP5.36□□□□□ -1.55
MATR3-219ENST00000512040 RFX1P22670 979 aa5.36□□□□□ -1.55
MATR3-219ENST00000512040 HSD3B2P26439 372 aa5.36□□□□□ -1.55
MATR3-219ENST00000512040 ERCC5P28715 1186 aaPredicted RBP5.36□□□□□ -1.55
MATR3-219ENST00000512040 GRM5P41594 1212 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms