RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 IFNKQ9P0W0 207 aa8.33□□□□□ -1.08
CPNE4-208ENST00000511604 MAST1Q9Y2H9 1570 aa8.33□□□□□ -1.08
CPNE4-208ENST00000511604 PPP2R2CQ9Y2T4 447 aa8.33□□□□□ -1.08
CPNE4-208ENST00000511604 GOLGA6L9A6NEM1 432 aa8.32□□□□□ -1.08
CPNE4-208ENST00000511604 AHCYL1O43865 530 aa8.32□□□□□ -1.08
CPNE4-208ENST00000511604 FCHSD2O94868 740 aa8.32□□□□□ -1.08
CPNE4-208ENST00000511604 SLC8A1P32418 973 aa8.32□□□□□ -1.08
CPNE4-208ENST00000511604 RANBP1P43487 201 aa8.32□□□□□ -1.08
CPNE4-208ENST00000511604 PPFIA1Q13136 1202 aa8.32□□□□□ -1.08
CPNE4-208ENST00000511604 CCDC181Q5TID7 509 aa8.32□□□□□ -1.08
CPNE4-208ENST00000511604 PRPF40BQ6NWY9 871 aaKnown RBP8.32□□□□□ -1.08
CPNE4-208ENST00000511604 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.32□□□□□ -1.08
CPNE4-208ENST00000511604 PARP9Q8IXQ6 854 aa8.32□□□□□ -1.08
CPNE4-208ENST00000511604 CCDC13Q8IYE1 715 aa8.32□□□□□ -1.08
CPNE4-208ENST00000511604 CEP57L1Q8IYX8 460 aa8.32□□□□□ -1.08
CPNE4-208ENST00000511604 HOOK2Q96ED9 719 aa8.32□□□□□ -1.08
CPNE4-208ENST00000511604 CAPS2Q9BXY5 557 aa8.32□□□□□ -1.08
CPNE4-208ENST00000511604 TSGA10Q9BZW7 698 aa8.32□□□□□ -1.08
CPNE4-208ENST00000511604 ANO10Q9NW15 660 aa8.32□□□□□ -1.08
CPNE4-208ENST00000511604 PUF60Q9UHX1 559 aaKnown RBP8.32□□□□□ -1.08
CPNE4-208ENST00000511604 LRRC7Q96NW7 1537 aa8.32□□□□□ -1.08
CPNE4-208ENST00000511604 A0A0U1RQJ8 604 aa8.32□□□□□ -1.08
CPNE4-208ENST00000511604 SPDYE3A6NKU9 549 aa8.32□□□□□ -1.08
CPNE4-208ENST00000511604 ZNF202O95125 648 aa8.32□□□□□ -1.08
CPNE4-208ENST00000511604 POLD1P28340 1107 aa8.32□□□□□ -1.08
CPNE4-208ENST00000511604 TUBB4BP68371 445 aa8.32□□□□□ -1.08
CPNE4-208ENST00000511604 MIS18BP1Q6P0N0 1132 aa8.32□□□□□ -1.08
CPNE4-208ENST00000511604 SLC30A9Q6PML9 568 aa8.32□□□□□ -1.08
CPNE4-208ENST00000511604 ATRIPQ8WXE1 791 aa8.32□□□□□ -1.08
CPNE4-208ENST00000511604 FAM163AQ96GL9 167 aaPredicted RBP8.32□□□□□ -1.08
CPNE4-208ENST00000511604 FMNL2Q96PY5 1086 aa8.32□□□□□ -1.08
CPNE4-208ENST00000511604 LRRCC1Q9C099 1032 aa8.32□□□□□ -1.08
CPNE4-208ENST00000511604 PICK1Q9NRD5 415 aa8.32□□□□□ -1.08
CPNE4-208ENST00000511604 RGL1Q9NZL6 768 aa8.32□□□□□ -1.08
CPNE4-208ENST00000511604 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.32□□□□□ -1.08
CPNE4-208ENST00000511604 ABCA8O94911 1581 aa8.31□□□□□ -1.08
CPNE4-208ENST00000511604 ARAP3Q8WWN8 1544 aa8.31□□□□□ -1.08
CPNE4-208ENST00000511604 ZCCHC11Q5TAX3 1644 aaKnown RBP8.31□□□□□ -1.08
CPNE4-208ENST00000511604 CDC42BPBQ9Y5S2 1711 aa8.31□□□□□ -1.08
CPNE4-208ENST00000511604 JAK2O60674 1132 aa8.31□□□□□ -1.08
CPNE4-208ENST00000511604 OATP04181 439 aa8.31□□□□□ -1.08
CPNE4-208ENST00000511604 SLC4A2P04920 1241 aa8.31□□□□□ -1.08
CPNE4-208ENST00000511604 TUBBP07437 444 aa8.31□□□□□ -1.08
CPNE4-208ENST00000511604 RHOXF2BP0C7M4 288 aa8.31□□□□□ -1.08
CPNE4-208ENST00000511604 MFN1Q8IWA4 741 aa8.31□□□□□ -1.08
CPNE4-208ENST00000511604 AFAP1Q8N556 730 aa8.31□□□□□ -1.08
CPNE4-208ENST00000511604 CCDC12Q8WUD4 166 aaPredicted RBP8.31□□□□□ -1.08
CPNE4-208ENST00000511604 NUP133Q8WUM0 1156 aa8.31□□□□□ -1.08
CPNE4-208ENST00000511604 RIN2Q8WYP3 895 aaPredicted RBP8.31□□□□□ -1.08
CPNE4-208ENST00000511604 SCLT1Q96NL6 688 aa8.31□□□□□ -1.08
CPNE4-208ENST00000511604 EPAS1Q99814 870 aa8.31□□□□□ -1.08
CPNE4-208ENST00000511604 RHOXF2Q9BQY4 288 aa8.31□□□□□ -1.08
CPNE4-208ENST00000511604 BIN2Q9UBW5 565 aaPredicted RBP8.31□□□□□ -1.08
CPNE4-208ENST00000511604 PCDHGC5Q9Y5F6 944 aa8.31□□□□□ -1.08
CPNE4-208ENST00000511604 EMILIN1Q9Y6C2 1016 aa8.31□□□□□ -1.08
CPNE4-208ENST00000511604 GOLGA6CA6NDK9 693 aa8.31□□□□□ -1.08
CPNE4-208ENST00000511604 NDUFAB1O14561 156 aa8.31□□□□□ -1.08
CPNE4-208ENST00000511604 GOLGA6DP0CG33 693 aa8.31□□□□□ -1.08
CPNE4-208ENST00000511604 GNGT1P63211 74 aa8.31□□□□□ -1.08
CPNE4-208ENST00000511604 CWF19L1Q69YN2 538 aaKnown RBP8.31□□□□□ -1.08
CPNE4-208ENST00000511604 CYB5D1Q6P9G0 228 aa8.31□□□□□ -1.08
CPNE4-208ENST00000511604 BZW1Q7L1Q6 419 aaKnown RBP8.31□□□□□ -1.08
CPNE4-208ENST00000511604 DPF2Q92785 391 aa8.31□□□□□ -1.08
CPNE4-208ENST00000511604 OSBPL9Q96SU4 736 aa8.31□□□□□ -1.08
CPNE4-208ENST00000511604 SLX1AQ9BQ83 275 aa8.31□□□□□ -1.08
CPNE4-208ENST00000511604 GOLGA6AQ9NYA3 693 aa8.31□□□□□ -1.08
CPNE4-208ENST00000511604 ZC3H4Q9UPT8 1303 aaKnown RBP8.3□□□□□ -1.08
CPNE4-208ENST00000511604 ARHGAP6O43182 974 aa8.3□□□□□ -1.08
CPNE4-208ENST00000511604 SMNDC1O75940 238 aaKnown RBP eCLIP8.3□□□□□ -1.08
CPNE4-208ENST00000511604 FMNL1O95466 1100 aaPredicted RBP8.3□□□□□ -1.08
CPNE4-208ENST00000511604 TPP2P29144 1249 aaPredicted RBP8.3□□□□□ -1.08
CPNE4-208ENST00000511604 ZRSR2Q15696 482 aaKnown RBP8.3□□□□□ -1.08
CPNE4-208ENST00000511604 MICALCLQ6ZW33 695 aa8.3□□□□□ -1.08
CPNE4-208ENST00000511604 MCM10Q7L590 875 aa8.3□□□□□ -1.08
CPNE4-208ENST00000511604 ACRBPQ8NEB7 543 aa8.3□□□□□ -1.08
CPNE4-208ENST00000511604 FAM81AQ8TBF8 368 aa8.3□□□□□ -1.08
CPNE4-208ENST00000511604 YIPF3Q9GZM5 350 aa8.3□□□□□ -1.08
CPNE4-208ENST00000511604 ZRANB1Q9UGI0 708 aa8.3□□□□□ -1.08
CPNE4-208ENST00000511604 TPX2Q9ULW0 747 aaKnown RBP8.3□□□□□ -1.08
CPNE4-208ENST00000511604 HPCAL4Q9UM19 191 aa8.3□□□□□ -1.08
CPNE4-208ENST00000511604 PHF8Q9UPP1 1060 aa8.3□□□□□ -1.08
CPNE4-208ENST00000511604 ERICH2A1L162 156 aa8.3□□□□□ -1.08
CPNE4-208ENST00000511604 KIF3BO15066 747 aa8.3□□□□□ -1.08
CPNE4-208ENST00000511604 ATP1A3P13637 1013 aa8.3□□□□□ -1.08
CPNE4-208ENST00000511604 PAPOLAP51003 745 aaKnown RBP8.3□□□□□ -1.08
CPNE4-208ENST00000511604 HSP90AB2PQ58FF8 381 aa8.3□□□□□ -1.08
CPNE4-208ENST00000511604 BRAPQ7Z569 592 aa8.3□□□□□ -1.08
CPNE4-208ENST00000511604 FUKQ8N0W3 1084 aa8.3□□□□□ -1.08
CPNE4-208ENST00000511604 PI4K2BQ8TCG2 481 aa8.3□□□□□ -1.08
CPNE4-208ENST00000511604 CDC23Q9UJX2 597 aa8.3□□□□□ -1.08
CPNE4-208ENST00000511604 SBNO2Q9Y2G9 1366 aa8.29□□□□□ -1.08
CPNE4-208ENST00000511604 TRPM2O94759 1503 aa8.29□□□□□ -1.08
CPNE4-208ENST00000511604 BIN1O00499 593 aa8.29□□□□□ -1.08
CPNE4-208ENST00000511604 GGCXP38435 758 aa8.29□□□□□ -1.08
CPNE4-208ENST00000511604 ROR2Q01974 943 aaKnown RBP8.29□□□□□ -1.08
CPNE4-208ENST00000511604 SF3B2Q13435 895 aaKnown RBP8.29□□□□□ -1.08
CPNE4-208ENST00000511604 CCDC178Q5BJE1 867 aa8.29□□□□□ -1.08
CPNE4-208ENST00000511604 NECTIN2Q92692 538 aa8.29□□□□□ -1.08
CPNE4-208ENST00000511604 CORO1CQ9ULV4 474 aaPredicted RBP8.29□□□□□ -1.08
CPNE4-208ENST00000511604 TRPC6Q9Y210 931 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms