RNA–Protein interactions for RNA: ENST00000511544.5

CC2D2A-209, Transcript of coiled-coil and C2 domain containing 2A, humanhuman

TSL 1 (best)

Gene CC2D2A, Length 1,663 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CC2D2A-209ENST00000511544 ST7Q9NRC1 585 aa13.71□□□□□ -0.21
CC2D2A-209ENST00000511544 PDRG1Q9NUG6 133 aa13.71□□□□□ -0.21
CC2D2A-209ENST00000511544 SRP68Q9UHB9 627 aaKnown RBP13.71□□□□□ -0.21
CC2D2A-209ENST00000511544 SH3TC1Q8TE82 1336 aa13.7□□□□□ -0.22
CC2D2A-209ENST00000511544 N4BP2Q86UW6 1770 aaPredicted RBP13.7□□□□□ -0.22
CC2D2A-209ENST00000511544 NPHP1O15259 732 aa13.7□□□□□ -0.22
CC2D2A-209ENST00000511544 EIF3JO75822 258 aaKnown RBP13.7□□□□□ -0.22
CC2D2A-209ENST00000511544 LIG1P18858 919 aa13.7□□□□□ -0.22
CC2D2A-209ENST00000511544 PSMA5P28066 241 aa13.7□□□□□ -0.22
CC2D2A-209ENST00000511544 PSEN1P49768 467 aa13.7□□□□□ -0.22
CC2D2A-209ENST00000511544 CNTROBQ8N137 903 aa13.7□□□□□ -0.22
CC2D2A-209ENST00000511544 SYNE4Q8N205 404 aa13.7□□□□□ -0.22
CC2D2A-209ENST00000511544 NEK11Q8NG66 645 aa13.7□□□□□ -0.22
CC2D2A-209ENST00000511544 KLHDC4Q8TBB5 520 aa13.7□□□□□ -0.22
CC2D2A-209ENST00000511544 RHPN1Q8TCX5 695 aa13.7□□□□□ -0.22
CC2D2A-209ENST00000511544 MPHOSPH8Q99549 860 aa13.7□□□□□ -0.22
CC2D2A-209ENST00000511544 ZSCAN16Q9H4T2 348 aaPredicted RBP13.7□□□□□ -0.22
CC2D2A-209ENST00000511544 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.7□□□□□ -0.22
CC2D2A-209ENST00000511544 CICQ96RK0 1608 aaPredicted RBP13.7□□□□□ -0.22
CC2D2A-209ENST00000511544 CDHR2Q9BYE9 1310 aa13.7□□□□□ -0.22
CC2D2A-209ENST00000511544 POLR3GO15318 223 aaPredicted RBP13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 PDE8AO60658 829 aa13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 ATP2B1P20020 1258 aa13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 USP8P40818 1118 aa13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 BRD3Q15059 726 aa13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 CAMK4Q16566 473 aa13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 SMARCE1Q969G3 411 aa13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 PPP1R13BQ96KQ4 1090 aa13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 TRERF1Q96PN7 1200 aa13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 CCDC85AQ96PX6 553 aaPredicted RBP13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 DNAJC25Q9H1X3 360 aa13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 ZSWIM6Q9HCJ5 1215 aa13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 IL1RAPL2Q9NP60 686 aa13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 USP27XA6NNY8 438 aa13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 ZSCAN12O43309 604 aa13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 TADA3O75528 432 aa13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 CPP00450 1065 aa13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 ZKSCAN1P17029 563 aaPredicted RBP13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 SFPQP23246 707 aaKnown RBP eCLIP13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 TBC1D9BQ66K14 1250 aa13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 AMIGO3Q86WK7 504 aa13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 CKAP2LQ8IYA6 745 aa13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 CLASRPQ8N2M8 674 aaKnown RBP13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 BICD2Q8TD16 824 aa13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 LEO1Q8WVC0 666 aaPredicted RBP13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 CEP89Q96ST8 783 aa13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 BPIFA3Q9BQP9 254 aa13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 PLA2G12BQ9BX93 195 aa13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 COPRSQ9NQ92 184 aa13.69□□□□□ -0.22
CC2D2A-209ENST00000511544 MYH14Q7Z406 1995 aaKnown RBP13.68□□□□□ -0.22
CC2D2A-209ENST00000511544 MYO1BO43795 1136 aa13.68□□□□□ -0.22
CC2D2A-209ENST00000511544 SMC2O95347 1197 aa13.68□□□□□ -0.22
CC2D2A-209ENST00000511544 PTPN12Q05209 780 aaKnown RBP13.68□□□□□ -0.22
CC2D2A-209ENST00000511544 IFIT5Q13325 482 aaKnown RBP13.68□□□□□ -0.22
CC2D2A-209ENST00000511544 TUBB2AQ13885 445 aa13.68□□□□□ -0.22
CC2D2A-209ENST00000511544 CC2D1AQ6P1N0 951 aaPredicted RBP13.68□□□□□ -0.22
CC2D2A-209ENST00000511544 TPTE2Q6XPS3 522 aa13.68□□□□□ -0.22
CC2D2A-209ENST00000511544 NUTM1Q86Y26 1132 aa13.68□□□□□ -0.22
CC2D2A-209ENST00000511544 CEP120Q8N960 986 aa13.68□□□□□ -0.22
CC2D2A-209ENST00000511544 RABGGTAQ92696 567 aa13.68□□□□□ -0.22
CC2D2A-209ENST00000511544 DDX11Q96FC9 970 aa13.68□□□□□ -0.22
CC2D2A-209ENST00000511544 TUBB2BQ9BVA1 445 aa13.68□□□□□ -0.22
CC2D2A-209ENST00000511544 NYXQ9GZU5 481 aa13.68□□□□□ -0.22
CC2D2A-209ENST00000511544 LSG1Q9H089 658 aaKnown RBP13.68□□□□□ -0.22
CC2D2A-209ENST00000511544 ACBD3Q9H3P7 528 aa13.68□□□□□ -0.22
CC2D2A-209ENST00000511544 NUP188Q5SRE5 1749 aa13.68□□□□□ -0.22
CC2D2A-209ENST00000511544 USP42Q9H9J4 1324 aaKnown RBP13.68□□□□□ -0.22
CC2D2A-209ENST00000511544 COL5A3P25940 1745 aaPredicted RBP13.67□□□□□ -0.22
CC2D2A-209ENST00000511544 CCDC151A5D8V7 595 aa13.67□□□□□ -0.22
CC2D2A-209ENST00000511544 CTSWP56202 376 aa13.67□□□□□ -0.22
CC2D2A-209ENST00000511544 EN1Q05925 392 aaPredicted RBP13.67□□□□□ -0.22
CC2D2A-209ENST00000511544 NBPF5PQ86XG9 351 aaPredicted RBP13.67□□□□□ -0.22
CC2D2A-209ENST00000511544 HOMER1Q86YM7 354 aa13.67□□□□□ -0.22
CC2D2A-209ENST00000511544 CCDC83Q8IWF9 413 aa13.67□□□□□ -0.22
CC2D2A-209ENST00000511544 EFCAB13Q8IY85 973 aa13.67□□□□□ -0.22
CC2D2A-209ENST00000511544 HNRNPLLQ8WVV9 542 aaKnown RBP13.67□□□□□ -0.22
CC2D2A-209ENST00000511544 TRMT1Q9NXH9 659 aaKnown RBP13.67□□□□□ -0.22
CC2D2A-209ENST00000511544 BCCIPQ9P287 314 aaKnown RBP eCLIP13.67□□□□□ -0.22
CC2D2A-209ENST00000511544 ADAM21Q9UKJ8 722 aa13.67□□□□□ -0.22
CC2D2A-209ENST00000511544 LY75O60449 1722 aa13.67□□□□□ -0.22
CC2D2A-209ENST00000511544 NTSR2O95665 410 aa13.66□□□□□ -0.22
CC2D2A-209ENST00000511544 TBC1D8O95759 1140 aa13.66□□□□□ -0.22
CC2D2A-209ENST00000511544 CSF1RP07333 972 aa13.66□□□□□ -0.22
CC2D2A-209ENST00000511544 RFX5P48382 616 aaPredicted RBP13.66□□□□□ -0.22
CC2D2A-209ENST00000511544 TTLL11Q8NHH1 800 aa13.66□□□□□ -0.22
CC2D2A-209ENST00000511544 CHMP4CQ96CF2 233 aa13.66□□□□□ -0.22
CC2D2A-209ENST00000511544 RREB1Q92766 1687 aa13.66□□□□□ -0.22
CC2D2A-209ENST00000511544 AFDNP55196 1824 aaKnown RBP13.66□□□□□ -0.22
CC2D2A-209ENST00000511544 CCDC196A0A1B0GTZ2 297 aa13.66□□□□□ -0.22
CC2D2A-209ENST00000511544 ANKRD18BA2A2Z9 1011 aa13.66□□□□□ -0.22
CC2D2A-209ENST00000511544 HIP1O00291 1037 aa13.66□□□□□ -0.22
CC2D2A-209ENST00000511544 ERLIN1O75477 346 aa13.66□□□□□ -0.22
CC2D2A-209ENST00000511544 IFIT2P09913 472 aaKnown RBP13.66□□□□□ -0.22
CC2D2A-209ENST00000511544 ITGA6P23229 1130 aa13.66□□□□□ -0.22
CC2D2A-209ENST00000511544 BAG6P46379 1132 aa13.66□□□□□ -0.22
CC2D2A-209ENST00000511544 EZH2Q15910 746 aaKnown RBP13.66□□□□□ -0.22
CC2D2A-209ENST00000511544 E4F1Q66K89 784 aaPredicted RBP13.66□□□□□ -0.22
CC2D2A-209ENST00000511544 FLAD1Q8NFF5 587 aa13.66□□□□□ -0.22
CC2D2A-209ENST00000511544 C4BP0C0L5 1744 aa13.65□□□□□ -0.22
CC2D2A-209ENST00000511544 CCDC172P0C7W6 258 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms