RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 PDCL3Q9H2J4 239 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 PARP2Q9UGN5 583 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 BZW2Q9Y6E2 419 aaKnown RBP5.59□□□□□ -1.51
PTPN13-209ENST00000511467 LMTK3Q96Q04 1460 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 PSDA5PKW4 1024 aaPredicted RBP5.59□□□□□ -1.52
PTPN13-209ENST00000511467 SLU7O95391 586 aaKnown RBP5.59□□□□□ -1.52
PTPN13-209ENST00000511467 SMC1AQ14683 1233 aaKnown RBP5.59□□□□□ -1.52
PTPN13-209ENST00000511467 CNNM4Q6P4Q7 775 aa5.59□□□□□ -1.52
PTPN13-209ENST00000511467 WAPLQ7Z5K2 1190 aa5.59□□□□□ -1.52
PTPN13-209ENST00000511467 MCF2L2Q86YR7 1114 aa5.59□□□□□ -1.52
PTPN13-209ENST00000511467 JDP2Q8WYK2 163 aa5.59□□□□□ -1.52
PTPN13-209ENST00000511467 LNPKQ9C0E8 428 aa5.59□□□□□ -1.52
PTPN13-209ENST00000511467 JRKLQ9Y4A0 524 aa5.59□□□□□ -1.52
PTPN13-209ENST00000511467 MTA1Q13330 715 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 PPP1R2P1Q96PQ5 205 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 MED1Q15648 1581 aaPredicted RBP5.58□□□□□ -1.52
PTPN13-209ENST00000511467 MARF1Q9Y4F3 1742 aaKnown RBP5.58□□□□□ -1.52
PTPN13-209ENST00000511467 PFDN6O15212 129 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 ZNF277Q9NRM2 450 aaPredicted RBP5.58□□□□□ -1.52
PTPN13-209ENST00000511467 SSX2IPQ9Y2D8 614 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 DEKP35659 375 aaKnown RBP5.58□□□□□ -1.52
PTPN13-209ENST00000511467 EXOSC9Q06265 439 aaKnown RBP5.58□□□□□ -1.52
PTPN13-209ENST00000511467 KIAA1328Q86T90 577 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 SPC24Q8NBT2 197 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 SPC25Q9HBM1 224 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 CASZ1Q86V15 1759 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 PPFIA3O75145 1194 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 TBCAO75347 108 aaKnown RBP5.58□□□□□ -1.52
PTPN13-209ENST00000511467 GCFC2P16383 781 aaKnown RBP5.58□□□□□ -1.52
PTPN13-209ENST00000511467 IARSP41252 1262 aaKnown RBP5.58□□□□□ -1.52
PTPN13-209ENST00000511467 SLC27A3Q5K4L6 730 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 NBPF6Q5VWK0 638 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 SYCE1Q8N0S2 351 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 NBPF4Q96M43 638 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 USP31Q70CQ4 1352 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 GIGYF1O75420 1035 aaPredicted RBP5.58□□□□□ -1.52
PTPN13-209ENST00000511467 IRX4P78413 519 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 OTUD7BQ6GQQ9 843 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 TAOK1Q7L7X3 1001 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 HAUS1Q96CS2 278 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 SH2D4BQ5SQS7 431 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 NBPF5PQ86XG9 351 aaPredicted RBP5.58□□□□□ -1.52
PTPN13-209ENST00000511467 CCDC117Q8IWD4 279 aaPredicted RBP5.58□□□□□ -1.52
PTPN13-209ENST00000511467 SLFN12Q8IYM2 578 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 CCDC155Q8N6L0 562 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 NOX5Q96PH1 765 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 TRPV6Q9H1D0 765 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 DCTPP1Q9H773 170 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 MIA3Q5JRA6 1907 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 KRT13P13646 458 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 RBM5P52756 815 aaKnown RBP eCLIP5.58□□□□□ -1.52
PTPN13-209ENST00000511467 PPFIA1Q13136 1202 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 WTAPQ15007 396 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 ZSCAN30Q86W11 494 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 RRP36Q96EU6 259 aaKnown RBP5.58□□□□□ -1.52
PTPN13-209ENST00000511467 ITGB4P16144 1822 aa5.58□□□□□ -1.52
PTPN13-209ENST00000511467 PTPRUQ92729 1446 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 DYNC1I1O14576 645 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 KRT86O43790 486 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 ATP8B2P98198 1209 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 MECOMQ03112 1051 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 CCDC65Q8IXS2 484 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 CCHCR1Q8TD31 782 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 HOMER3Q9NSC5 361 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 ARPP21Q9UBL0 812 aaPredicted RBP5.57□□□□□ -1.52
PTPN13-209ENST00000511467 STK10O94804 968 aaKnown RBP5.57□□□□□ -1.52
PTPN13-209ENST00000511467 EIF5P55010 431 aaKnown RBP5.57□□□□□ -1.52
PTPN13-209ENST00000511467 EVCP57679 992 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 SURF1Q15526 300 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 TTC22Q5TAA0 569 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 SMC5Q8IY18 1101 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 CNKSR1Q969H4 720 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 NUTM2DQ5VT03 806 aaPredicted RBP5.57□□□□□ -1.52
PTPN13-209ENST00000511467 CACNA2D4Q7Z3S7 1137 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 NUTM2AQ8IVF1 878 aaPredicted RBP5.57□□□□□ -1.52
PTPN13-209ENST00000511467 IQUBQ8NA54 791 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 EXOC1Q9NV70 894 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 RAI14Q9P0K7 980 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 LEMD3Q9Y2U8 911 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 USP54Q70EL1 1684 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 FOSP01100 380 aaPredicted RBP5.57□□□□□ -1.52
PTPN13-209ENST00000511467 DDX5P17844 614 aaKnown RBP5.57□□□□□ -1.52
PTPN13-209ENST00000511467 NAA16Q6N069 864 aaPredicted RBP5.57□□□□□ -1.52
PTPN13-209ENST00000511467 CCDC50Q8IVM0 306 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 GPR161Q8N6U8 529 aaKnown RBP5.57□□□□□ -1.52
PTPN13-209ENST00000511467 TRIM11Q96F44 468 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 NRKQ7Z2Y5 1582 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 CICQ96RK0 1608 aaPredicted RBP5.57□□□□□ -1.52
PTPN13-209ENST00000511467 ZBTB43O43298 467 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 PPP2R5AQ15172 486 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 NBPF1Q3BBV0 1214 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 EP400NLQ6ZTU2 488 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 DSCC1Q9BVC3 393 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 VPS33BQ9H267 617 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 TRMT112Q9UI30 125 aaKnown RBP5.57□□□□□ -1.52
PTPN13-209ENST00000511467 CRB1P82279 1406 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 IPO5O00410 1097 aaKnown RBP5.57□□□□□ -1.52
PTPN13-209ENST00000511467 XPOTO43592 962 aaKnown RBP5.57□□□□□ -1.52
PTPN13-209ENST00000511467 CAPN15O75808 1086 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 ZSCAN20P17040 1043 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms