RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 SEMA3EO15041 775 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 CYP21A2P08686 494 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 CASTP20810 708 aaKnown RBP9.62□□□□□ -0.87
SMAD1-209ENST00000511125 PRAMEF18Q5VWM3 479 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 CIAPIN1Q6FI81 312 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 EPB41L4AQ9HCS5 686 aaPredicted RBP9.62□□□□□ -0.87
SMAD1-209ENST00000511125 USP40Q9NVE5 1235 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 MCM9Q9NXL9 1143 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 MTMR7Q9Y216 660 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 DAGLAQ9Y4D2 1042 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 MYH13Q9UKX3 1938 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 TCP10L2B9ZVM9 353 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 USP17L12C9JPN9 530 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 USP17L21D6R901 530 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 KDM4AO75164 1064 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 MCCP23508 829 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 CRKP46108 304 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 SOGA3Q5TF21 947 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 C15orf52Q6ZUT6 534 aaKnown RBP9.62□□□□□ -0.87
SMAD1-209ENST00000511125 ZSCAN29Q8IWY8 852 aaPredicted RBP9.62□□□□□ -0.87
SMAD1-209ENST00000511125 TEX11Q8IYF3 940 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 IFNL3Q8IZI9 196 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 MAP4K1Q92918 833 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 PRMT6Q96LA8 375 aaPredicted RBP9.62□□□□□ -0.87
SMAD1-209ENST00000511125 ZKSCAN3Q9BRR0 538 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 SNX14Q9Y5W7 946 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 ASTN2O75129 1339 aaPredicted RBP9.62□□□□□ -0.87
SMAD1-209ENST00000511125 RAD50Q92878 1312 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 GSG1L2A8MUP6 293 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 EIF6P56537 245 aaKnown RBP9.62□□□□□ -0.87
SMAD1-209ENST00000511125 NFIAQ12857 509 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 STRIP1Q5VSL9 837 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 ZFPM1Q8IX07 1006 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 ZGPATQ8N5A5 531 aaKnown RBP9.62□□□□□ -0.87
SMAD1-209ENST00000511125 GMPSP49915 693 aaPredicted RBP9.61□□□□□ -0.87
SMAD1-209ENST00000511125 CFAP100Q494V2 611 aa9.61□□□□□ -0.87
SMAD1-209ENST00000511125 OGFOD1Q8N543 542 aa9.61□□□□□ -0.87
SMAD1-209ENST00000511125 TBC1D22AQ8WUA7 517 aa9.61□□□□□ -0.87
SMAD1-209ENST00000511125 DYNLL2Q96FJ2 89 aa9.61□□□□□ -0.87
SMAD1-209ENST00000511125 KIF2CQ99661 725 aa9.61□□□□□ -0.87
SMAD1-209ENST00000511125 RIOK1Q9BRS2 568 aaKnown RBP9.61□□□□□ -0.87
SMAD1-209ENST00000511125 SCN9AQ15858 1988 aa9.61□□□□□ -0.87
SMAD1-209ENST00000511125 FGD1P98174 961 aa9.61□□□□□ -0.87
SMAD1-209ENST00000511125 NBPF9Q3BBW0 867 aa9.61□□□□□ -0.87
SMAD1-209ENST00000511125 SLC44A5Q8NCS7 719 aa9.61□□□□□ -0.87
SMAD1-209ENST00000511125 TEKT1Q969V4 418 aa9.61□□□□□ -0.87
SMAD1-209ENST00000511125 GPHNQ9NQX3 736 aaPredicted RBP9.61□□□□□ -0.87
SMAD1-209ENST00000511125 ZNF213O14771 459 aa9.6□□□□□ -0.87
SMAD1-209ENST00000511125 RSBN1LQ6PCB5 846 aaPredicted RBP9.6□□□□□ -0.87
SMAD1-209ENST00000511125 STOX1Q6ZVD7 989 aa9.6□□□□□ -0.87
SMAD1-209ENST00000511125 PATL2C9JE40 543 aaKnown RBP9.6□□□□□ -0.87
SMAD1-209ENST00000511125 POLR3DP05423 398 aaPredicted RBP9.6□□□□□ -0.87
SMAD1-209ENST00000511125 ZKSCAN1P17029 563 aaPredicted RBP9.6□□□□□ -0.87
SMAD1-209ENST00000511125 LMNB1P20700 586 aa9.6□□□□□ -0.87
SMAD1-209ENST00000511125 HSPA4P34932 840 aa9.6□□□□□ -0.87
SMAD1-209ENST00000511125 DAXXQ9UER7 740 aaPredicted RBP9.6□□□□□ -0.87
SMAD1-209ENST00000511125 FZD1Q9UP38 647 aa9.6□□□□□ -0.87
SMAD1-209ENST00000511125 MROH7-TTC4A0A0A0MT08 1334 aa9.6□□□□□ -0.87
SMAD1-209ENST00000511125 FAM205AQ6ZU69 1335 aa9.6□□□□□ -0.87
SMAD1-209ENST00000511125 BAG3O95817 575 aa9.6□□□□□ -0.87
SMAD1-209ENST00000511125 STK3Q13188 491 aa9.6□□□□□ -0.87
SMAD1-209ENST00000511125 NECTIN1Q15223 517 aa9.6□□□□□ -0.87
SMAD1-209ENST00000511125 CDAN1Q8IWY9 1227 aa9.6□□□□□ -0.87
SMAD1-209ENST00000511125 MICALL2Q8IY33 904 aa9.6□□□□□ -0.87
SMAD1-209ENST00000511125 A0A1B0GUL6 1792 aa9.59□□□□□ -0.87
SMAD1-209ENST00000511125 LDHCP07864 332 aa9.59□□□□□ -0.87
SMAD1-209ENST00000511125 EPS15P42566 896 aa9.59□□□□□ -0.87
SMAD1-209ENST00000511125 PRKG1Q13976 671 aa9.59□□□□□ -0.87
SMAD1-209ENST00000511125 CDC42EP5Q6NZY7 148 aa9.59□□□□□ -0.87
SMAD1-209ENST00000511125 CRNKL1Q9BZJ0 848 aaKnown RBP9.59□□□□□ -0.87
SMAD1-209ENST00000511125 DDX4Q9NQI0 724 aaKnown RBP9.59□□□□□ -0.87
SMAD1-209ENST00000511125 CNOT7Q9UIV1 285 aaKnown RBP9.59□□□□□ -0.87
SMAD1-209ENST00000511125 B4E1Z4 1266 aa9.59□□□□□ -0.87
SMAD1-209ENST00000511125 PLCD1P51178 756 aa9.59□□□□□ -0.87
SMAD1-209ENST00000511125 GSTO1P78417 241 aa9.59□□□□□ -0.87
SMAD1-209ENST00000511125 DLGAP5Q15398 846 aa9.59□□□□□ -0.87
SMAD1-209ENST00000511125 IMMTQ16891 758 aaKnown RBP9.59□□□□□ -0.87
SMAD1-209ENST00000511125 FAM47AQ5JRC9 791 aa9.59□□□□□ -0.87
SMAD1-209ENST00000511125 APOBEC3HQ6NTF7 200 aaKnown RBP9.59□□□□□ -0.87
SMAD1-209ENST00000511125 TBC1D10CQ8IV04 446 aa9.59□□□□□ -0.87
SMAD1-209ENST00000511125 SLKQ9H2G2 1235 aaPredicted RBP9.59□□□□□ -0.87
SMAD1-209ENST00000511125 NACAP1Q9BZK3 213 aa9.58□□□□□ -0.88
SMAD1-209ENST00000511125 DCP1AQ9NPI6 582 aaPredicted RBP9.58□□□□□ -0.88
SMAD1-209ENST00000511125 TACC3Q9Y6A5 838 aa9.58□□□□□ -0.88
SMAD1-209ENST00000511125 U3KPZ7 1027 aaPredicted RBP9.58□□□□□ -0.88
SMAD1-209ENST00000511125 SNED1Q8TER0 1413 aa9.58□□□□□ -0.88
SMAD1-209ENST00000511125 E7EWF7 191 aa9.58□□□□□ -0.88
SMAD1-209ENST00000511125 RANBP6O60518 1105 aaKnown RBP9.58□□□□□ -0.88
SMAD1-209ENST00000511125 VIL1P09327 827 aaKnown RBP9.58□□□□□ -0.88
SMAD1-209ENST00000511125 RXRAP19793 462 aa9.58□□□□□ -0.88
SMAD1-209ENST00000511125 RBM25P49756 843 aaKnown RBP9.58□□□□□ -0.88
SMAD1-209ENST00000511125 CTR9Q6PD62 1173 aa9.58□□□□□ -0.88
SMAD1-209ENST00000511125 MIGA2Q7L4E1 593 aa9.58□□□□□ -0.88
SMAD1-209ENST00000511125 DDRGK1Q96HY6 314 aa9.58□□□□□ -0.88
SMAD1-209ENST00000511125 RAD21O60216 631 aa9.57□□□□□ -0.88
SMAD1-209ENST00000511125 HSP90AA1P07900 732 aaKnown RBP9.57□□□□□ -0.88
SMAD1-209ENST00000511125 EAPPQ56P03 285 aaPredicted RBP9.57□□□□□ -0.88
SMAD1-209ENST00000511125 RNF20Q5VTR2 975 aa9.57□□□□□ -0.88
SMAD1-209ENST00000511125 CCDC144CPQ8IYA2 1237 aa9.57□□□□□ -0.88
SMAD1-209ENST00000511125 DSCC1Q9BVC3 393 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms