RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 YIPF2Q9BWQ6 316 aa12.71□□□□□ -0.37
USP53-206ENST00000510737 C1GALT1Q9NS00 363 aa12.71□□□□□ -0.37
USP53-206ENST00000510737 RAD18Q9NS91 495 aa12.71□□□□□ -0.37
USP53-206ENST00000510737 TMEM238LA0A1B0GVL6 79 aa12.7□□□□□ -0.38
USP53-206ENST00000510737 ZNF157P51786 506 aaPredicted RBP12.7□□□□□ -0.38
USP53-206ENST00000510737 GRM2Q14416 872 aa12.7□□□□□ -0.38
USP53-206ENST00000510737 COL19A1Q14993 1142 aa12.7□□□□□ -0.38
USP53-206ENST00000510737 DNAJC25Q9H1X3 360 aa12.7□□□□□ -0.38
USP53-206ENST00000510737 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.69□□□□□ -0.38
USP53-206ENST00000510737 CYP26A1O43174 497 aa12.69□□□□□ -0.38
USP53-206ENST00000510737 ASPAP45381 313 aa12.69□□□□□ -0.38
USP53-206ENST00000510737 ZNF765Q7L2R6 523 aa12.69□□□□□ -0.38
USP53-206ENST00000510737 CSRNP1Q96S65 589 aa12.68□□□□□ -0.38
USP53-206ENST00000510737 CCDC86Q9H6F5 360 aaKnown RBP12.68□□□□□ -0.38
USP53-206ENST00000510737 LGR6Q9HBX8 967 aa12.68□□□□□ -0.38
USP53-206ENST00000510737 GADD45BO75293 160 aaPredicted RBP12.67□□□□□ -0.38
USP53-206ENST00000510737 LIG1P18858 919 aa12.67□□□□□ -0.38
USP53-206ENST00000510737 MAP7Q14244 749 aa12.67□□□□□ -0.38
USP53-206ENST00000510737 PDE3AQ14432 1141 aa12.67□□□□□ -0.38
USP53-206ENST00000510737 HP1BP3Q5SSJ5 553 aaPredicted RBP12.67□□□□□ -0.38
USP53-206ENST00000510737 PI16Q6UXB8 463 aa12.67□□□□□ -0.38
USP53-206ENST00000510737 TMC1Q8TDI8 760 aa12.67□□□□□ -0.38
USP53-206ENST00000510737 KRTAP9-9Q9BYP9 154 aa12.67□□□□□ -0.38
USP53-206ENST00000510737 KRTAP9-4Q9BYQ2 154 aa12.67□□□□□ -0.38
USP53-206ENST00000510737 DDX54Q8TDD1 881 aaKnown RBP12.66□□□□□ -0.38
USP53-206ENST00000510737 ALKBH8Q96BT7 664 aaKnown RBP12.66□□□□□ -0.38
USP53-206ENST00000510737 RBCK1Q9BYM8 510 aa12.66□□□□□ -0.38
USP53-206ENST00000510737 ZC3H12CQ9C0D7 883 aaKnown RBP12.66□□□□□ -0.38
USP53-206ENST00000510737 ZFYVE1Q9HBF4 777 aa12.66□□□□□ -0.38
USP53-206ENST00000510737 ZC3H7BQ9UGR2 993 aaKnown RBP12.66□□□□□ -0.38
USP53-206ENST00000510737 ANGEL1Q9UNK9 670 aaKnown RBP12.66□□□□□ -0.38
USP53-206ENST00000510737 TMPRSS2O15393 492 aa12.65□□□□□ -0.38
USP53-206ENST00000510737 ZNF862O60290 1169 aa12.65□□□□□ -0.38
USP53-206ENST00000510737 AP3B2Q13367 1082 aa12.65□□□□□ -0.38
USP53-206ENST00000510737 RPS26P11Q5JNZ5 115 aaPredicted RBP12.65□□□□□ -0.38
USP53-206ENST00000510737 DAGLAQ9Y4D2 1042 aa12.65□□□□□ -0.38
USP53-206ENST00000510737 VSIG10LQ86VR7 867 aa12.64□□□□□ -0.39
USP53-206ENST00000510737 LRRC4CQ9HCJ2 640 aa12.64□□□□□ -0.39
USP53-206ENST00000510737 SYNGAP1Q96PV0 1343 aa12.63□□□□□ -0.39
USP53-206ENST00000510737 SUPT5HO00267 1087 aaKnown RBP12.63□□□□□ -0.39
USP53-206ENST00000510737 CBLL1Q75N03 491 aa12.63□□□□□ -0.39
USP53-206ENST00000510737 BSDC1Q9NW68 430 aaPredicted RBP12.63□□□□□ -0.39
USP53-206ENST00000510737 RNF114Q9Y508 228 aa12.63□□□□□ -0.39
USP53-206ENST00000510737 PCDHGC5Q9Y5F6 944 aa12.63□□□□□ -0.39
USP53-206ENST00000510737 SOWAHDA6NJG2 315 aa12.62□□□□□ -0.39
USP53-206ENST00000510737 DMRTB1Q96MA1 342 aa12.62□□□□□ -0.39
USP53-206ENST00000510737 CRIM1Q9NZV1 1036 aa12.62□□□□□ -0.39
USP53-206ENST00000510737 DUSP27Q5VZP5 1158 aa12.61□□□□□ -0.39
USP53-206ENST00000510737 TMC7Q7Z402 723 aa12.61□□□□□ -0.39
USP53-206ENST00000510737 SCRIBQ14160 1630 aa12.61□□□□□ -0.39
USP53-206ENST00000510737 TXKP42681 527 aa12.6□□□□□ -0.39
USP53-206ENST00000510737 WFDC3Q8IUB2 231 aa12.6□□□□□ -0.39
USP53-206ENST00000510737 STK35Q8TDR2 534 aa12.6□□□□□ -0.39
USP53-206ENST00000510737 FANCD2OSQ96PS1 177 aa12.6□□□□□ -0.39
USP53-206ENST00000510737 PAK6Q9NQU5 681 aaPredicted RBP12.6□□□□□ -0.39
USP53-206ENST00000510737 TRAK1Q9UPV9 953 aa12.6□□□□□ -0.39
USP53-206ENST00000510737 ERCC6Q03468 1493 aa12.59□□□□□ -0.39
USP53-206ENST00000510737 FCGRTP55899 365 aa12.59□□□□□ -0.39
USP53-206ENST00000510737 OGFOD3Q6PK18 319 aa12.59□□□□□ -0.39
USP53-206ENST00000510737 PDZD3Q86UT5 571 aa12.59□□□□□ -0.39
USP53-206ENST00000510737 CCER1Q8TC90 406 aaPredicted RBP12.59□□□□□ -0.39
USP53-206ENST00000510737 GSTP1P09211 210 aaKnown RBP12.58□□□□□ -0.4
USP53-206ENST00000510737 TP53INP2Q8IXH6 220 aa12.58□□□□□ -0.4
USP53-206ENST00000510737 DISC1Q9NRI5 854 aa12.58□□□□□ -0.4
USP53-206ENST00000510737 CYP27A1Q02318 531 aa12.57□□□□□ -0.4
USP53-206ENST00000510737 CDK5R2Q13319 367 aa12.57□□□□□ -0.4
USP53-206ENST00000510737 KIF4BQ2VIQ3 1234 aa12.57□□□□□ -0.4
USP53-206ENST00000510737 DTHD1Q6ZMT9 781 aa12.57□□□□□ -0.4
USP53-206ENST00000510737 FBXL18Q96ME1 805 aa12.57□□□□□ -0.4
USP53-206ENST00000510737 U3KQE9 123 aa12.57□□□□□ -0.4
USP53-206ENST00000510737 DSC3Q14574 896 aa12.56□□□□□ -0.4
USP53-206ENST00000510737 FLCNQ8NFG4 579 aa12.56□□□□□ -0.4
USP53-206ENST00000510737 BCO2Q9BYV7 579 aa12.56□□□□□ -0.4
USP53-206ENST00000510737 ID3Q02535 119 aa12.55□□□□□ -0.4
USP53-206ENST00000510737 ZNF574Q6ZN55 896 aaPredicted RBP12.54□□□□□ -0.4
USP53-206ENST00000510737 BCL7CQ8WUZ0 217 aaPredicted RBP12.53□□□□□ -0.4
USP53-206ENST00000510737 KRT82Q9NSB4 513 aa12.53□□□□□ -0.4
USP53-206ENST00000510737 TMEM39AQ9NV64 488 aa12.53□□□□□ -0.4
USP53-206ENST00000510737 GPN3Q9UHW5 284 aaPredicted RBP12.53□□□□□ -0.4
USP53-206ENST00000510737 TTLL4Q14679 1199 aa12.52□□□□□ -0.41
USP53-206ENST00000510737 NXPE4Q6UWF7 544 aa12.52□□□□□ -0.41
USP53-206ENST00000510737 SPRED2Q7Z698 418 aa12.52□□□□□ -0.41
USP53-206ENST00000510737 ATXN3LQ9H3M9 355 aa12.52□□□□□ -0.41
USP53-206ENST00000510737 DCTN4Q9UJW0 460 aa12.52□□□□□ -0.41
USP53-206ENST00000510737 GNEQ9Y223 722 aaKnown RBP12.52□□□□□ -0.41
USP53-206ENST00000510737 NEFMP07197 916 aa12.51□□□□□ -0.41
USP53-206ENST00000510737 SLFN14P0C7P3 912 aa12.51□□□□□ -0.41
USP53-206ENST00000510737 FAM87AP0C7U9 286 aa12.51□□□□□ -0.41
USP53-206ENST00000510737 FAM181AQ8N9Y4 354 aa12.51□□□□□ -0.41
USP53-206ENST00000510737 NLRP2Q9NX02 1062 aa12.51□□□□□ -0.41
USP53-206ENST00000510737 HCLS1P14317 486 aaPredicted RBP12.5□□□□□ -0.41
USP53-206ENST00000510737 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.5□□□□□ -0.41
USP53-206ENST00000510737 SMYD4Q8IYR2 804 aaPredicted RBP12.5□□□□□ -0.41
USP53-206ENST00000510737 KCNB2Q92953 911 aa12.5□□□□□ -0.41
USP53-206ENST00000510737 PIDD1Q9HB75 910 aa12.5□□□□□ -0.41
USP53-206ENST00000510737 BIN2Q9UBW5 565 aaPredicted RBP12.5□□□□□ -0.41
USP53-206ENST00000510737 PNMA6FA0A0J9YX94 578 aa12.49□□□□□ -0.41
USP53-206ENST00000510737 LEFTY1O75610 366 aa12.49□□□□□ -0.41
USP53-206ENST00000510737 ITGB5P18084 799 aa12.49□□□□□ -0.41
USP53-206ENST00000510737 MPRIPQ6WCQ1 1025 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms