RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 ALDH3A1P30838 453 aa11.89□□□□□ -0.51
NEK1-206ENST00000510533 ZNF445P59923 1031 aa11.89□□□□□ -0.51
NEK1-206ENST00000510533 KRBA2Q6ZNG9 492 aa11.89□□□□□ -0.51
NEK1-206ENST00000510533 LRRC59Q96AG4 307 aaKnown RBP11.89□□□□□ -0.51
NEK1-206ENST00000510533 SNX14Q9Y5W7 946 aa11.89□□□□□ -0.51
NEK1-206ENST00000510533 NDC80O14777 642 aa11.89□□□□□ -0.51
NEK1-206ENST00000510533 LACTBP83111 547 aaPredicted RBP11.89□□□□□ -0.51
NEK1-206ENST00000510533 MAP7D1Q3KQU3 841 aa11.89□□□□□ -0.51
NEK1-206ENST00000510533 B4GALNT4Q76KP1 1039 aa11.89□□□□□ -0.51
NEK1-206ENST00000510533 SIRT1Q96EB6 747 aa11.89□□□□□ -0.51
NEK1-206ENST00000510533 PARP1P09874 1014 aaKnown RBP11.88□□□□□ -0.51
NEK1-206ENST00000510533 PLS1Q14651 629 aa11.88□□□□□ -0.51
NEK1-206ENST00000510533 LETM2Q2VYF4 491 aa11.88□□□□□ -0.51
NEK1-206ENST00000510533 C8orf74Q6P047 294 aa11.88□□□□□ -0.51
NEK1-206ENST00000510533 OGFOD1Q8N543 542 aa11.88□□□□□ -0.51
NEK1-206ENST00000510533 AOX1Q06278 1338 aa11.88□□□□□ -0.51
NEK1-206ENST00000510533 EPB41P11171 864 aaKnown RBP11.88□□□□□ -0.51
NEK1-206ENST00000510533 ATP5DP30049 168 aa11.88□□□□□ -0.51
NEK1-206ENST00000510533 PDE4DQ08499 809 aa11.88□□□□□ -0.51
NEK1-206ENST00000510533 DPH6Q7L8W6 267 aa11.88□□□□□ -0.51
NEK1-206ENST00000510533 TTC16Q8NEE8 873 aa11.88□□□□□ -0.51
NEK1-206ENST00000510533 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.88□□□□□ -0.51
NEK1-206ENST00000510533 CBX8Q9HC52 389 aa11.88□□□□□ -0.51
NEK1-206ENST00000510533 RRAGDQ9NQL2 400 aaPredicted RBP11.88□□□□□ -0.51
NEK1-206ENST00000510533 EIF2AK4Q9P2K8 1649 aaKnown RBP11.88□□□□□ -0.51
NEK1-206ENST00000510533 DUOX2Q9NRD8 1548 aa11.88□□□□□ -0.51
NEK1-206ENST00000510533 FAM212AQ96EL1 285 aa11.88□□□□□ -0.51
NEK1-206ENST00000510533 RSRC1Q96IZ7 334 aaKnown RBP11.88□□□□□ -0.51
NEK1-206ENST00000510533 CFAP57Q96MR6 1250 aa11.88□□□□□ -0.51
NEK1-206ENST00000510533 TESK2Q96S53 571 aa11.88□□□□□ -0.51
NEK1-206ENST00000510533 IMPACTQ9P2X3 320 aa11.88□□□□□ -0.51
NEK1-206ENST00000510533 FRMD4BQ9Y2L6 1034 aa11.88□□□□□ -0.51
NEK1-206ENST00000510533 NPATQ14207 1427 aa11.88□□□□□ -0.51
NEK1-206ENST00000510533 LDHBP07195 334 aaKnown RBP11.88□□□□□ -0.51
NEK1-206ENST00000510533 PSMC4P43686 418 aa11.88□□□□□ -0.51
NEK1-206ENST00000510533 CNNM4Q6P4Q7 775 aa11.88□□□□□ -0.51
NEK1-206ENST00000510533 INTS8Q75QN2 995 aaKnown RBP11.88□□□□□ -0.51
NEK1-206ENST00000510533 OTUD7AQ8TE49 926 aaPredicted RBP11.88□□□□□ -0.51
NEK1-206ENST00000510533 LEO1Q8WVC0 666 aaPredicted RBP11.88□□□□□ -0.51
NEK1-206ENST00000510533 ACSBG1Q96GR2 724 aa11.88□□□□□ -0.51
NEK1-206ENST00000510533 PTPRKQ15262 1439 aa11.88□□□□□ -0.51
NEK1-206ENST00000510533 PLCH2O75038 1416 aa11.87□□□□□ -0.51
NEK1-206ENST00000510533 B4E1Z4 1266 aa11.87□□□□□ -0.51
NEK1-206ENST00000510533 GBP6Q6ZN66 633 aa11.87□□□□□ -0.51
NEK1-206ENST00000510533 EYA1Q99502 592 aa11.87□□□□□ -0.51
NEK1-206ENST00000510533 CARD6Q9BX69 1037 aa11.87□□□□□ -0.51
NEK1-206ENST00000510533 TRIM7Q9C029 511 aa11.87□□□□□ -0.51
NEK1-206ENST00000510533 CUTAO60888 179 aa11.87□□□□□ -0.51
NEK1-206ENST00000510533 AKNAD1Q5T1N1 836 aa11.87□□□□□ -0.51
NEK1-206ENST00000510533 GPR161Q8N6U8 529 aaKnown RBP11.87□□□□□ -0.51
NEK1-206ENST00000510533 ANKRD2Q9GZV1 360 aa11.87□□□□□ -0.51
NEK1-206ENST00000510533 SYNRGQ9UMZ2 1314 aa11.87□□□□□ -0.51
NEK1-206ENST00000510533 MAP3K9P80192 1104 aa11.87□□□□□ -0.51
NEK1-206ENST00000510533 MLKLQ8NB16 471 aa11.87□□□□□ -0.51
NEK1-206ENST00000510533 PPFIBP2Q8ND30 876 aa11.87□□□□□ -0.51
NEK1-206ENST00000510533 MYRIPQ8NFW9 859 aa11.87□□□□□ -0.51
NEK1-206ENST00000510533 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.87□□□□□ -0.51
NEK1-206ENST00000510533 FAM169AQ9Y6X4 670 aa11.87□□□□□ -0.51
NEK1-206ENST00000510533 A0A1B0GUL7 405 aa11.87□□□□□ -0.51
NEK1-206ENST00000510533 VIMP08670 466 aaKnown RBP11.87□□□□□ -0.51
NEK1-206ENST00000510533 HPDP32754 393 aaPredicted RBP11.87□□□□□ -0.51
NEK1-206ENST00000510533 TPTE2Q6XPS3 522 aa11.87□□□□□ -0.51
NEK1-206ENST00000510533 CARD14Q9BXL6 1004 aa11.87□□□□□ -0.51
NEK1-206ENST00000510533 DDX21Q9NR30 783 aaKnown RBP eCLIP11.87□□□□□ -0.51
NEK1-206ENST00000510533 TNNI3KQ59H18 835 aa11.87□□□□□ -0.51
NEK1-206ENST00000510533 DCAF5Q96JK2 942 aa11.87□□□□□ -0.51
NEK1-206ENST00000510533 FPGT-TNNI3KV9GXZ4 949 aa11.87□□□□□ -0.51
NEK1-206ENST00000510533 URB2Q14146 1524 aaKnown RBP11.86□□□□□ -0.51
NEK1-206ENST00000510533 NLRP12P59046 1061 aa11.86□□□□□ -0.51
NEK1-206ENST00000510533 CSRNP2Q9H175 543 aa11.86□□□□□ -0.51
NEK1-206ENST00000510533 A6NNZ2 444 aa11.86□□□□□ -0.51
NEK1-206ENST00000510533 B4DLN1 442 aa11.86□□□□□ -0.51
NEK1-206ENST00000510533 NDUFAB1O14561 156 aa11.86□□□□□ -0.51
NEK1-206ENST00000510533 RNMTO43148 476 aaKnown RBP11.86□□□□□ -0.51
NEK1-206ENST00000510533 ACTN4O43707 911 aaKnown RBP11.86□□□□□ -0.51
NEK1-206ENST00000510533 TNFAIP3P21580 790 aa11.86□□□□□ -0.51
NEK1-206ENST00000510533 MRPL12P52815 198 aaKnown RBP11.86□□□□□ -0.51
NEK1-206ENST00000510533 MRPS9P82933 396 aaKnown RBP11.86□□□□□ -0.51
NEK1-206ENST00000510533 ELF2Q15723 593 aa11.86□□□□□ -0.51
NEK1-206ENST00000510533 INF2Q27J81 1249 aa11.86□□□□□ -0.51
NEK1-206ENST00000510533 TUBB8Q3ZCM7 444 aa11.86□□□□□ -0.51
NEK1-206ENST00000510533 CCDC14Q49A88 953 aa11.86□□□□□ -0.51
NEK1-206ENST00000510533 CFAP157Q5JU67 520 aa11.86□□□□□ -0.51
NEK1-206ENST00000510533 UTP14CQ5TAP6 766 aaKnown RBP11.86□□□□□ -0.51
NEK1-206ENST00000510533 IFT74Q96LB3 600 aa11.86□□□□□ -0.51
NEK1-206ENST00000510533 NUP58Q9BVL2 599 aa11.86□□□□□ -0.51
NEK1-206ENST00000510533 ZBTB21Q9ULJ3 1066 aa11.86□□□□□ -0.51
NEK1-206ENST00000510533 EYA2O00167 538 aa11.86□□□□□ -0.51
NEK1-206ENST00000510533 SPOPO43791 374 aa11.86□□□□□ -0.51
NEK1-206ENST00000510533 IL2RBP14784 551 aa11.86□□□□□ -0.51
NEK1-206ENST00000510533 FAM173BQ6P4H8 233 aa11.86□□□□□ -0.51
NEK1-206ENST00000510533 G2E3Q7L622 706 aa11.86□□□□□ -0.51
NEK1-206ENST00000510533 CSGALNACT2Q8N6G5 542 aa11.86□□□□□ -0.51
NEK1-206ENST00000510533 ZC3H12CQ9C0D7 883 aaKnown RBP11.86□□□□□ -0.51
NEK1-206ENST00000510533 POLR2DO15514 142 aaKnown RBP11.86□□□□□ -0.51
NEK1-206ENST00000510533 SGSM2O43147 1006 aa11.86□□□□□ -0.51
NEK1-206ENST00000510533 NCBP1Q09161 790 aaKnown RBP11.86□□□□□ -0.51
NEK1-206ENST00000510533 PAK1Q13153 545 aa11.86□□□□□ -0.51
NEK1-206ENST00000510533 CEP128Q6ZU80 1094 aa11.86□□□□□ -0.51
NEK1-206ENST00000510533 PIK3AP1Q6ZUJ8 805 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms