RNA–Protein interactions for RNA: ENST00000510362.5

RETREG1-206, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best)

Gene RETREG1, Length 1,054 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-206ENST00000510362 NLGN2Q8NFZ4 835 aa11.77□□□□□ -0.53
RETREG1-206ENST00000510362 MRS2Q9HD23 443 aa11.77□□□□□ -0.53
RETREG1-206ENST00000510362 HRH3Q9Y5N1 445 aa11.77□□□□□ -0.53
RETREG1-206ENST00000510362 USP16Q9Y5T5 823 aa11.77□□□□□ -0.53
RETREG1-206ENST00000510362 AFDNP55196 1824 aaKnown RBP11.76□□□□□ -0.53
RETREG1-206ENST00000510362 BACH1O14867 736 aa11.76□□□□□ -0.53
RETREG1-206ENST00000510362 ST8SIA5O15466 376 aa11.76□□□□□ -0.53
RETREG1-206ENST00000510362 SPINT1O43278 529 aa11.76□□□□□ -0.53
RETREG1-206ENST00000510362 UPP2O95045 317 aa11.76□□□□□ -0.53
RETREG1-206ENST00000510362 CALD1Q05682 793 aaKnown RBP11.76□□□□□ -0.53
RETREG1-206ENST00000510362 SWI5Q1ZZU3 235 aa11.76□□□□□ -0.53
RETREG1-206ENST00000510362 TRIM46Q7Z4K8 759 aa11.76□□□□□ -0.53
RETREG1-206ENST00000510362 KIAA1551Q9HCM1 1747 aa11.76□□□□□ -0.53
RETREG1-206ENST00000510362 GOLGB1Q14789 3259 aaKnown RBP11.76□□□□□ -0.53
RETREG1-206ENST00000510362 CHD4Q14839 1912 aa11.76□□□□□ -0.53
RETREG1-206ENST00000510362 PRAMEF22A3QJZ6 481 aa11.75□□□□□ -0.53
RETREG1-206ENST00000510362 APAF1O14727 1248 aa11.75□□□□□ -0.53
RETREG1-206ENST00000510362 GPR162Q16538 588 aa11.75□□□□□ -0.53
RETREG1-206ENST00000510362 C6orf118Q5T5N4 469 aa11.75□□□□□ -0.53
RETREG1-206ENST00000510362 INSM2Q96T92 566 aaPredicted RBP11.75□□□□□ -0.53
RETREG1-206ENST00000510362 AAASQ9NRG9 546 aa11.75□□□□□ -0.53
RETREG1-206ENST00000510362 N4BP2Q86UW6 1770 aaPredicted RBP11.74□□□□□ -0.53
RETREG1-206ENST00000510362 POLRMTO00411 1230 aaKnown RBP11.74□□□□□ -0.53
RETREG1-206ENST00000510362 TM4SF1P30408 202 aa11.74□□□□□ -0.53
RETREG1-206ENST00000510362 EPHA4P54764 986 aa11.74□□□□□ -0.53
RETREG1-206ENST00000510362 TGFB2P61812 414 aa11.74□□□□□ -0.53
RETREG1-206ENST00000510362 PDE4CQ08493 712 aa11.74□□□□□ -0.53
RETREG1-206ENST00000510362 CCDC184Q52MB2 194 aa11.74□□□□□ -0.53
RETREG1-206ENST00000510362 NLRP3Q96P20 1036 aa11.74□□□□□ -0.53
RETREG1-206ENST00000510362 ERBB4Q15303 1308 aa11.74□□□□□ -0.53
RETREG1-206ENST00000510362 BRCA1P38398 1863 aaKnown RBP11.74□□□□□ -0.53
RETREG1-206ENST00000510362 PXDNLA1KZ92 1463 aa11.73□□□□□ -0.53
RETREG1-206ENST00000510362 CHL1O00533 1208 aa11.73□□□□□ -0.53
RETREG1-206ENST00000510362 LGR5O75473 907 aa11.73□□□□□ -0.53
RETREG1-206ENST00000510362 BMP2P12643 396 aa11.73□□□□□ -0.53
RETREG1-206ENST00000510362 PDIA4P13667 645 aaKnown RBP11.73□□□□□ -0.53
RETREG1-206ENST00000510362 SMTNP53814 917 aa11.73□□□□□ -0.53
RETREG1-206ENST00000510362 DDR1Q08345 913 aa11.73□□□□□ -0.53
RETREG1-206ENST00000510362 TLR1Q15399 786 aa11.73□□□□□ -0.53
RETREG1-206ENST00000510362 TNS4Q8IZW8 715 aa11.73□□□□□ -0.53
RETREG1-206ENST00000510362 CLP1Q92989 425 aaKnown RBP11.73□□□□□ -0.53
RETREG1-206ENST00000510362 PURBQ96QR8 312 aaKnown RBP11.73□□□□□ -0.53
RETREG1-206ENST00000510362 HINFPQ9BQA5 517 aa11.73□□□□□ -0.53
RETREG1-206ENST00000510362 TRAIPQ9BWF2 469 aa11.73□□□□□ -0.53
RETREG1-206ENST00000510362 ZNF652Q9Y2D9 606 aa11.73□□□□□ -0.53
RETREG1-206ENST00000510362 DLEC1Q9Y238 1755 aa11.72□□□□□ -0.53
RETREG1-206ENST00000510362 CARMIL3Q8ND23 1372 aa11.72□□□□□ -0.53
RETREG1-206ENST00000510362 GRIN3BO60391 1043 aa11.72□□□□□ -0.53
RETREG1-206ENST00000510362 CTSOP43234 321 aaPredicted RBP11.72□□□□□ -0.53
RETREG1-206ENST00000510362 CENPCQ03188 943 aa11.72□□□□□ -0.53
RETREG1-206ENST00000510362 NFIXQ14938 502 aa11.72□□□□□ -0.53
RETREG1-206ENST00000510362 MTFR1Q15390 333 aa11.72□□□□□ -0.53
RETREG1-206ENST00000510362 CLEC4GQ6UXB4 293 aa11.72□□□□□ -0.53
RETREG1-206ENST00000510362 LAS1LQ9Y4W2 734 aaKnown RBP11.72□□□□□ -0.53
RETREG1-206ENST00000510362 A6NJY4 79 aa11.71□□□□□ -0.53
RETREG1-206ENST00000510362 CAMTA2O94983 1202 aa11.71□□□□□ -0.53
RETREG1-206ENST00000510362 PIP4K2AP48426 406 aaPredicted RBP11.71□□□□□ -0.53
RETREG1-206ENST00000510362 GNAI1P63096 354 aa11.71□□□□□ -0.53
RETREG1-206ENST00000510362 SCARF1Q14162 830 aa11.71□□□□□ -0.53
RETREG1-206ENST00000510362 CCDC27Q2M243 656 aa11.71□□□□□ -0.53
RETREG1-206ENST00000510362 NBPF10Q6P3W6 841 aaKnown RBP11.71□□□□□ -0.53
RETREG1-206ENST00000510362 NBPF15Q8N660 670 aa11.71□□□□□ -0.53
RETREG1-206ENST00000510362 POLMQ9NP87 494 aaPredicted RBP11.71□□□□□ -0.53
RETREG1-206ENST00000510362 IFT57Q9NWB7 429 aa11.71□□□□□ -0.53
RETREG1-206ENST00000510362 DACH1Q9UI36 760 aa11.71□□□□□ -0.53
RETREG1-206ENST00000510362 NUP98P52948 1817 aa11.7□□□□□ -0.54
RETREG1-206ENST00000510362 ARFGEF1Q9Y6D6 1849 aa11.7□□□□□ -0.54
RETREG1-206ENST00000510362 SERPINB2P05120 415 aa11.7□□□□□ -0.54
RETREG1-206ENST00000510362 HOXB7P09629 217 aa11.7□□□□□ -0.54
RETREG1-206ENST00000510362 FOXD4L5Q5VV16 416 aaPredicted RBP11.7□□□□□ -0.54
RETREG1-206ENST00000510362 TBC1D9BQ66K14 1250 aa11.7□□□□□ -0.54
RETREG1-206ENST00000510362 ZFP42Q96MM3 310 aa11.7□□□□□ -0.54
RETREG1-206ENST00000510362 SETDB2Q96T68 719 aa11.7□□□□□ -0.54
RETREG1-206ENST00000510362 PRMT3O60678 531 aa11.69□□□□□ -0.54
RETREG1-206ENST00000510362 ZNF853P0CG23 659 aa11.69□□□□□ -0.54
RETREG1-206ENST00000510362 YBX3P16989 372 aaKnown RBP eCLIP11.69□□□□□ -0.54
RETREG1-206ENST00000510362 YY1P25490 414 aa11.69□□□□□ -0.54
RETREG1-206ENST00000510362 GPC1P35052 558 aa11.69□□□□□ -0.54
RETREG1-206ENST00000510362 RNF144AP50876 292 aaPredicted RBP11.69□□□□□ -0.54
RETREG1-206ENST00000510362 KIF6Q6ZMV9 814 aa11.69□□□□□ -0.54
RETREG1-206ENST00000510362 BICDL1Q6ZP65 573 aa11.69□□□□□ -0.54
RETREG1-206ENST00000510362 ATP13A2Q9NQ11 1180 aa11.69□□□□□ -0.54
RETREG1-206ENST00000510362 SCHIP1Q9P0W5 487 aaPredicted RBP11.69□□□□□ -0.54
RETREG1-206ENST00000510362 ANKRD31Q8N7Z5 1873 aa11.68□□□□□ -0.54
RETREG1-206ENST00000510362 ERVV-1B6SEH8 477 aa11.68□□□□□ -0.54
RETREG1-206ENST00000510362 MYL6BP14649 208 aa11.68□□□□□ -0.54
RETREG1-206ENST00000510362 FOXK2Q01167 660 aa11.68□□□□□ -0.54
RETREG1-206ENST00000510362 GRIP2Q9C0E4 1043 aa11.68□□□□□ -0.54
RETREG1-206ENST00000510362 TSPAN10Q9H1Z9 355 aaPredicted RBP11.68□□□□□ -0.54
RETREG1-206ENST00000510362 MBIPQ9NS73 344 aa11.68□□□□□ -0.54
RETREG1-206ENST00000510362 USP3Q9Y6I4 520 aa11.68□□□□□ -0.54
RETREG1-206ENST00000510362 ATP10DQ9P241 1426 aa11.68□□□□□ -0.54
RETREG1-206ENST00000510362 ANKRD36CQ5JPF3 1778 aa11.67□□□□□ -0.54
RETREG1-206ENST00000510362 MAP3K15Q6ZN16 1313 aa11.67□□□□□ -0.54
RETREG1-206ENST00000510362 A0A0G2JLW4 131 aa11.67□□□□□ -0.54
RETREG1-206ENST00000510362 NPHP1O15259 732 aa11.67□□□□□ -0.54
RETREG1-206ENST00000510362 DPEP1P16444 411 aa11.67□□□□□ -0.54
RETREG1-206ENST00000510362 EIF2S2P20042 333 aaKnown RBP11.67□□□□□ -0.54
RETREG1-206ENST00000510362 OCLNQ16625 522 aa11.67□□□□□ -0.54
RETREG1-206ENST00000510362 TBCELQ5QJ74 424 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms