RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 BICDL1Q6ZP65 573 aa6.79□□□□□ -1.32
NEK1-204ENST00000509912 FAM196AQ6ZSG2 479 aa6.79□□□□□ -1.32
NEK1-204ENST00000509912 GPATCH3Q96I76 525 aa6.79□□□□□ -1.32
NEK1-204ENST00000509912 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.79□□□□□ -1.322e-6■□□□□ 9.9
NEK1-204ENST00000509912 GPAMQ9HCL2 828 aa6.79□□□□□ -1.32
NEK1-204ENST00000509912 CYP2E1P05181 493 aaPredicted RBP6.79□□□□□ -1.32
NEK1-204ENST00000509912 EIF4BP23588 611 aaKnown RBP6.79□□□□□ -1.32
NEK1-204ENST00000509912 ARID5AQ03989 594 aa6.79□□□□□ -1.32
NEK1-204ENST00000509912 ARSJQ5FYB0 599 aaPredicted RBP6.79□□□□□ -1.32
NEK1-204ENST00000509912 ZNF438Q7Z4V0 828 aa6.79□□□□□ -1.32
NEK1-204ENST00000509912 NLRP3Q96P20 1036 aa6.79□□□□□ -1.32
NEK1-204ENST00000509912 PRAM1Q96QH2 718 aa6.79□□□□□ -1.32
NEK1-204ENST00000509912 NLRP2Q9NX02 1062 aa6.79□□□□□ -1.32
NEK1-204ENST00000509912 CPNE3O75131 537 aaKnown RBP6.78□□□□□ -1.32
NEK1-204ENST00000509912 CD2BP2O95400 341 aaKnown RBP6.78□□□□□ -1.32
NEK1-204ENST00000509912 ACPPP15309 386 aa6.78□□□□□ -1.32
NEK1-204ENST00000509912 CTSOP43234 321 aaPredicted RBP6.78□□□□□ -1.32
NEK1-204ENST00000509912 NBPF8Q3BBV2 869 aa6.78□□□□□ -1.32
NEK1-204ENST00000509912 HS2ST1Q7LGA3 356 aa6.78□□□□□ -1.32
NEK1-204ENST00000509912 RHPN1Q8TCX5 695 aa6.78□□□□□ -1.32
NEK1-204ENST00000509912 CARD10Q9BWT7 1032 aa6.78□□□□□ -1.32
NEK1-204ENST00000509912 NIFKQ9BYG3 293 aaKnown RBP6.78□□□□□ -1.32
NEK1-204ENST00000509912 LTN1O94822 1766 aa6.78□□□□□ -1.32
NEK1-204ENST00000509912 C1orf127Q8N9H9 656 aa6.78□□□□□ -1.32
NEK1-204ENST00000509912 CNTN3Q9P232 1028 aa6.78□□□□□ -1.32
NEK1-204ENST00000509912 TLR6Q9Y2C9 796 aa6.78□□□□□ -1.32
NEK1-204ENST00000509912 FAM160A1Q05DH4 1040 aa6.78□□□□□ -1.32
NEK1-204ENST00000509912 NR5A1Q13285 461 aa6.78□□□□□ -1.32
NEK1-204ENST00000509912 MAP3K19Q56UN5 1328 aa6.78□□□□□ -1.32
NEK1-204ENST00000509912 KRT27Q7Z3Y8 459 aa6.78□□□□□ -1.32
NEK1-204ENST00000509912 ANKRD36BQ8N2N9 1353 aa6.78□□□□□ -1.32
NEK1-204ENST00000509912 HIRIP3Q9BW71 556 aaPredicted RBP6.78□□□□□ -1.32
NEK1-204ENST00000509912 NSD3Q9BZ95 1437 aa6.78□□□□□ -1.32
NEK1-204ENST00000509912 RTCBQ9Y3I0 505 aaKnown RBP6.78□□□□□ -1.32
NEK1-204ENST00000509912 WASF2Q9Y6W5 498 aa6.78□□□□□ -1.32
NEK1-204ENST00000509912 KIF13BQ9NQT8 1826 aa6.78□□□□□ -1.32
NEK1-204ENST00000509912 TEAD4Q15561 434 aa6.77□□□□□ -1.33
NEK1-204ENST00000509912 BCO2Q9BYV7 579 aa6.77□□□□□ -1.33
NEK1-204ENST00000509912 PGPEP1Q9NXJ5 209 aa6.77□□□□□ -1.33
NEK1-204ENST00000509912 SPG7Q9UQ90 795 aa6.77□□□□□ -1.33
NEK1-204ENST00000509912 BAG6P46379 1132 aa6.77□□□□□ -1.33
NEK1-204ENST00000509912 POU4F2Q12837 409 aa6.77□□□□□ -1.33
NEK1-204ENST00000509912 CCDC81Q6ZN84 652 aa6.77□□□□□ -1.33
NEK1-204ENST00000509912 SUSD3Q96L08 255 aa6.77□□□□□ -1.33
NEK1-204ENST00000509912 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.77□□□□□ -1.33
NEK1-204ENST00000509912 POGKQ9P215 609 aa6.77□□□□□ -1.33
NEK1-204ENST00000509912 GADD45BO75293 160 aaPredicted RBP6.76□□□□□ -1.33
NEK1-204ENST00000509912 USP5P45974 858 aa6.76□□□□□ -1.33
NEK1-204ENST00000509912 C6orf118Q5T5N4 469 aa6.76□□□□□ -1.33
NEK1-204ENST00000509912 DEFB132Q7Z7B7 95 aa6.76□□□□□ -1.33
NEK1-204ENST00000509912 CDK19Q9BWU1 502 aa6.76□□□□□ -1.33
NEK1-204ENST00000509912 KANSL2Q9H9L4 492 aa6.76□□□□□ -1.33
NEK1-204ENST00000509912 METTL5Q9NRN9 209 aaKnown RBP6.76□□□□□ -1.33
NEK1-204ENST00000509912 TONSLQ96HA7 1378 aa6.76□□□□□ -1.33
NEK1-204ENST00000509912 PTGIRP43119 386 aa6.76□□□□□ -1.33
NEK1-204ENST00000509912 TCEAL1Q15170 157 aa6.76□□□□□ -1.33
NEK1-204ENST00000509912 RAB44Q7Z6P3 723 aaPredicted RBP6.76□□□□□ -1.33
NEK1-204ENST00000509912 ARHGEF25Q86VW2 580 aa6.76□□□□□ -1.33
NEK1-204ENST00000509912 PCGF6Q9BYE7 350 aa6.76□□□□□ -1.33
NEK1-204ENST00000509912 C12orf49Q9H741 205 aa6.76□□□□□ -1.33
NEK1-204ENST00000509912 KCNMB2Q9Y691 235 aa6.76□□□□□ -1.33
NEK1-204ENST00000509912 WDR17Q8IZU2 1322 aa6.76□□□□□ -1.33
NEK1-204ENST00000509912 METTL12A8MUP2 240 aa6.75□□□□□ -1.33
NEK1-204ENST00000509912 FGRP09769 529 aa6.75□□□□□ -1.33
NEK1-204ENST00000509912 STAG2Q8N3U4 1231 aa6.75□□□□□ -1.33
NEK1-204ENST00000509912 C7orf43Q8WVR3 580 aa6.75□□□□□ -1.33
NEK1-204ENST00000509912 KLF16Q9BXK1 252 aaPredicted RBP6.75□□□□□ -1.33
NEK1-204ENST00000509912 ZNF408Q9H9D4 720 aa6.75□□□□□ -1.33
NEK1-204ENST00000509912 A0A0G2JS52 829 aa6.75□□□□□ -1.33
NEK1-204ENST00000509912 ATF4P18848 351 aaPredicted RBP6.75□□□□□ -1.33
NEK1-204ENST00000509912 GNL2Q13823 731 aaKnown RBP6.75□□□□□ -1.33
NEK1-204ENST00000509912 CAMKK2Q96RR4 588 aa6.75□□□□□ -1.33
NEK1-204ENST00000509912 ELP3Q9H9T3 547 aa6.75□□□□□ -1.33
NEK1-204ENST00000509912 POLMQ9NP87 494 aaPredicted RBP6.75□□□□□ -1.33
NEK1-204ENST00000509912 FAM83GA6ND36 823 aa6.75□□□□□ -1.33
NEK1-204ENST00000509912 ATP4AP20648 1035 aa6.75□□□□□ -1.33
NEK1-204ENST00000509912 SAFB2Q14151 953 aaKnown RBP eCLIP6.75□□□□□ -1.33
NEK1-204ENST00000509912 TTF2Q9UNY4 1162 aaKnown RBP6.75□□□□□ -1.33
NEK1-204ENST00000509912 KIAA0232Q92628 1395 aa6.74□□□□□ -1.33
NEK1-204ENST00000509912 FIGNL2A6NMB9 653 aa6.74□□□□□ -1.33
NEK1-204ENST00000509912 PHACTR2O75167 634 aa6.74□□□□□ -1.33
NEK1-204ENST00000509912 TIMP2P16035 220 aa6.74□□□□□ -1.33
NEK1-204ENST00000509912 ETFBP38117 255 aa6.74□□□□□ -1.33
NEK1-204ENST00000509912 ZNF157P51786 506 aaPredicted RBP6.74□□□□□ -1.33
NEK1-204ENST00000509912 RHBDD1Q8TEB9 315 aa6.74□□□□□ -1.33
NEK1-204ENST00000509912 SLC16A10Q8TF71 515 aa6.74□□□□□ -1.33
NEK1-204ENST00000509912 ZCCHC2Q9C0B9 1178 aaKnown RBP6.74□□□□□ -1.33
NEK1-204ENST00000509912 ACEP12821 1306 aa6.74□□□□□ -1.33
NEK1-204ENST00000509912 TARSP26639 723 aaKnown RBP6.74□□□□□ -1.33
NEK1-204ENST00000509912 TCP11L2Q8N4U5 519 aa6.74□□□□□ -1.33
NEK1-204ENST00000509912 HHIPQ96QV1 700 aa6.74□□□□□ -1.33
NEK1-204ENST00000509912 UBP1Q9NZI7 540 aa6.74□□□□□ -1.33
NEK1-204ENST00000509912 TTC21BQ7Z4L5 1316 aa6.73□□□□□ -1.33
NEK1-204ENST00000509912 C10orf71Q711Q0 1435 aa6.73□□□□□ -1.33
NEK1-204ENST00000509912 PCSK2P16519 638 aa6.73□□□□□ -1.33
NEK1-204ENST00000509912 TAF1CQ15572 869 aaPredicted RBP6.73□□□□□ -1.33
NEK1-204ENST00000509912 CHRDQ9H2X0 955 aa6.73□□□□□ -1.33
NEK1-204ENST00000509912 BTG4Q9NY30 223 aa6.73□□□□□ -1.33
NEK1-204ENST00000509912 ADAMTS1Q9UHI8 967 aa6.73□□□□□ -1.33
NEK1-204ENST00000509912 EFR3BQ9Y2G0 817 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms