RNA–Protein interactions for RNA: ENST00000509618.1

HTT-206, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-206ENST00000509618 LMOD3Q0VAK6 560 aa6.33□□□□□ -1.4
HTT-206ENST00000509618 ZNF697Q5TEC3 545 aa6.33□□□□□ -1.4
HTT-206ENST00000509618 MIGA2Q7L4E1 593 aa6.33□□□□□ -1.4
HTT-206ENST00000509618 ANKRD23Q86SG2 305 aa6.33□□□□□ -1.4
HTT-206ENST00000509618 ERO1BQ86YB8 467 aa6.33□□□□□ -1.4
HTT-206ENST00000509618 CCDC146Q8IYE0 955 aa6.33□□□□□ -1.4
HTT-206ENST00000509618 DZIP1LQ8IYY4 767 aaKnown RBP6.33□□□□□ -1.4
HTT-206ENST00000509618 C11orf49Q9H6J7 331 aa6.33□□□□□ -1.4
HTT-206ENST00000509618 CSADQ9Y600 493 aa6.33□□□□□ -1.4
HTT-206ENST00000509618 LTBP2Q14767 1821 aa6.32□□□□□ -1.4
HTT-206ENST00000509618 DOCK3Q8IZD9 2030 aa6.32□□□□□ -1.4
HTT-206ENST00000509618 COL6A1P12109 1028 aa6.32□□□□□ -1.4
HTT-206ENST00000509618 FOSL2P15408 326 aa6.32□□□□□ -1.4
HTT-206ENST00000509618 RIPK4P57078 832 aa6.32□□□□□ -1.4
HTT-206ENST00000509618 SHHQ15465 462 aa6.32□□□□□ -1.4
HTT-206ENST00000509618 NEUROD2Q15784 382 aa6.32□□□□□ -1.4
HTT-206ENST00000509618 CWF19L2Q2TBE0 894 aaKnown RBP6.32□□□□□ -1.4
HTT-206ENST00000509618 TJAP1Q5JTD0 557 aa6.32□□□□□ -1.4
HTT-206ENST00000509618 ZCCHC17Q9NP64 241 aaKnown RBP6.32□□□□□ -1.4
HTT-206ENST00000509618 KCNH4Q9UQ05 1017 aa6.32□□□□□ -1.4
HTT-206ENST00000509618 CHD9Q3L8U1 2897 aa6.32□□□□□ -1.4
HTT-206ENST00000509618 MAST2Q6P0Q8 1798 aa6.31□□□□□ -1.4
HTT-206ENST00000509618 CHL1O00533 1208 aa6.31□□□□□ -1.4
HTT-206ENST00000509618 IL1R1P14778 569 aa6.31□□□□□ -1.4
HTT-206ENST00000509618 ITGA6P23229 1130 aa6.31□□□□□ -1.4
HTT-206ENST00000509618 CRKP46108 304 aa6.31□□□□□ -1.4
HTT-206ENST00000509618 IRF5Q13568 498 aa6.31□□□□□ -1.4
HTT-206ENST00000509618 GRIN2CQ14957 1233 aa6.31□□□□□ -1.4
HTT-206ENST00000509618 DUSP27Q5VZP5 1158 aa6.31□□□□□ -1.4
HTT-206ENST00000509618 RIC3Q7Z5B4 369 aa6.31□□□□□ -1.4
HTT-206ENST00000509618 TRIB2Q92519 343 aa6.31□□□□□ -1.4
HTT-206ENST00000509618 RUNDC1Q96C34 613 aa6.31□□□□□ -1.4
HTT-206ENST00000509618 CDC5LQ99459 802 aaKnown RBP6.31□□□□□ -1.4
HTT-206ENST00000509618 NBPF3Q9H094 633 aa6.31□□□□□ -1.4
HTT-206ENST00000509618 CWC25Q9NXE8 425 aaPredicted RBP6.31□□□□□ -1.4
HTT-206ENST00000509618 TTF2Q9UNY4 1162 aaKnown RBP6.31□□□□□ -1.4
HTT-206ENST00000509618 ADAMTS8Q9UP79 889 aa6.31□□□□□ -1.4
HTT-206ENST00000509618 LEMD3Q9Y2U8 911 aa6.31□□□□□ -1.4
HTT-206ENST00000509618 DAGLAQ9Y4D2 1042 aa6.31□□□□□ -1.4
HTT-206ENST00000509618 PLXNB2O15031 1838 aa6.31□□□□□ -1.4
HTT-206ENST00000509618 DNAH12Q6ZR08 3092 aa6.31□□□□□ -1.4
HTT-206ENST00000509618 ATRNL1Q5VV63 1379 aa6.31□□□□□ -1.4
HTT-206ENST00000509618 FAM205AQ6ZU69 1335 aa6.3□□□□□ -1.4
HTT-206ENST00000509618 SYNGAP1Q96PV0 1343 aa6.3□□□□□ -1.4
HTT-206ENST00000509618 TNPO2O14787 897 aaKnown RBP6.3□□□□□ -1.4
HTT-206ENST00000509618 MYO1BO43795 1136 aa6.3□□□□□ -1.4
HTT-206ENST00000509618 HOXD10P28358 340 aa6.3□□□□□ -1.4
HTT-206ENST00000509618 TMPOP42166 694 aaKnown RBP6.3□□□□□ -1.4
HTT-206ENST00000509618 EPHB4P54760 987 aa6.3□□□□□ -1.4
HTT-206ENST00000509618 CASP7P55210 303 aa6.3□□□□□ -1.4
HTT-206ENST00000509618 MFSD14BQ5SR56 506 aa6.3□□□□□ -1.4
HTT-206ENST00000509618 ZFPM1Q8IX07 1006 aa6.3□□□□□ -1.4
HTT-206ENST00000509618 CCDC191Q8NCU4 936 aa6.3□□□□□ -1.4
HTT-206ENST00000509618 ADAMTS19Q8TE59 1207 aa6.3□□□□□ -1.4
HTT-206ENST00000509618 PXYLP1Q8TE99 480 aa6.3□□□□□ -1.4
HTT-206ENST00000509618 KHSRPQ92945 711 aaKnown RBP eCLIP6.3□□□□□ -1.4
HTT-206ENST00000509618 SNX27Q96L92 541 aa6.3□□□□□ -1.4
HTT-206ENST00000509618 METTL22Q9BUU2 404 aaPredicted RBP6.3□□□□□ -1.4
HTT-206ENST00000509618 MRS2Q9HD23 443 aa6.3□□□□□ -1.4
HTT-206ENST00000509618 DBF4Q9UBU7 674 aaPredicted RBP6.3□□□□□ -1.4
HTT-206ENST00000509618 OGDHLQ9ULD0 1010 aa6.3□□□□□ -1.4
HTT-206ENST00000509618 IQSEC3Q9UPP2 1182 aaPredicted RBP6.3□□□□□ -1.4
HTT-206ENST00000509618 TRIM35Q9UPQ4 493 aa6.3□□□□□ -1.4
HTT-206ENST00000509618 LAS1LQ9Y4W2 734 aaKnown RBP6.3□□□□□ -1.4
HTT-206ENST00000509618 ITGB8P26012 769 aa6.29□□□□□ -1.4
HTT-206ENST00000509618 CCND3P30281 292 aaPredicted RBP6.29□□□□□ -1.4
HTT-206ENST00000509618 GYG1P46976 350 aa6.29□□□□□ -1.4
HTT-206ENST00000509618 PPATQ06203 517 aa6.29□□□□□ -1.4
HTT-206ENST00000509618 NFIAQ12857 509 aa6.29□□□□□ -1.4
HTT-206ENST00000509618 TREML2Q5T2D2 321 aa6.29□□□□□ -1.4
HTT-206ENST00000509618 MAP3K21Q5TCX8 1036 aa6.29□□□□□ -1.4
HTT-206ENST00000509618 APOBEC3HQ6NTF7 200 aaKnown RBP6.29□□□□□ -1.4
HTT-206ENST00000509618 POTEEQ6S8J3 1075 aa6.29□□□□□ -1.4
HTT-206ENST00000509618 C15orf52Q6ZUT6 534 aaKnown RBP6.29□□□□□ -1.4
HTT-206ENST00000509618 UBE3BQ7Z3V4 1068 aa6.29□□□□□ -1.4
HTT-206ENST00000509618 ANKRD13CQ8N6S4 541 aa6.29□□□□□ -1.4
HTT-206ENST00000509618 PPM1EQ8WY54 764 aa6.29□□□□□ -1.4
HTT-206ENST00000509618 ZNF594Q96JF6 807 aaPredicted RBP6.29□□□□□ -1.4
HTT-206ENST00000509618 PARK7Q99497 189 aaKnown RBP6.29□□□□□ -1.4
HTT-206ENST00000509618 C11orf16Q9NQ32 467 aa6.29□□□□□ -1.4
HTT-206ENST00000509618 GJD2Q9UKL4 321 aa6.29□□□□□ -1.4
HTT-206ENST00000509618 MAP3K2Q9Y2U5 619 aa6.29□□□□□ -1.4
HTT-206ENST00000509618 FAM86C2PA6NEL3 165 aa6.28□□□□□ -1.4
HTT-206ENST00000509618 ELL2O00472 640 aaPredicted RBP6.28□□□□□ -1.4
HTT-206ENST00000509618 APAF1O14727 1248 aa6.28□□□□□ -1.4
HTT-206ENST00000509618 HMGCRP04035 888 aa6.28□□□□□ -1.4
HTT-206ENST00000509618 IGHMBP2P38935 993 aaKnown RBP6.28□□□□□ -1.4
HTT-206ENST00000509618 KCNJ4P48050 445 aa6.28□□□□□ -1.4
HTT-206ENST00000509618 MMP14P50281 582 aa6.28□□□□□ -1.4
HTT-206ENST00000509618 ATN1P54259 1190 aaPredicted RBP6.28□□□□□ -1.4
HTT-206ENST00000509618 FKBP1AP62942 108 aaKnown RBP6.28□□□□□ -1.4
HTT-206ENST00000509618 GOLGA2Q08379 1002 aa6.28□□□□□ -1.4
HTT-206ENST00000509618 TNFAIP1Q13829 316 aa6.28□□□□□ -1.4
HTT-206ENST00000509618 CCL14Q16627 93 aa6.28□□□□□ -1.4
HTT-206ENST00000509618 EPHA10Q5JZY3 1008 aa6.28□□□□□ -1.4
HTT-206ENST00000509618 LHX8Q68G74 356 aa6.28□□□□□ -1.4
HTT-206ENST00000509618 SH3RF1Q7Z6J0 888 aa6.28□□□□□ -1.4
HTT-206ENST00000509618 ALYREFQ86V81 257 aaKnown RBP6.28□□□□□ -1.4
HTT-206ENST00000509618 ANKLE1Q8NAG6 615 aa6.28□□□□□ -1.4
HTT-206ENST00000509618 UHRF1Q96T88 793 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms