RNA–Protein interactions for RNA: ENST00000509436.1

NDFIP1-204, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 5

Gene NDFIP1, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-204ENST00000509436 SLC5A1P13866 664 aa19.68■□□□□ 0.74
NDFIP1-204ENST00000509436 OTUD7AQ8TE49 926 aaPredicted RBP19.68■□□□□ 0.74
NDFIP1-204ENST00000509436 LPIN2Q92539 896 aa19.68■□□□□ 0.74
NDFIP1-204ENST00000509436 AOX1Q06278 1338 aa19.68■□□□□ 0.74
NDFIP1-204ENST00000509436 COL1A1P02452 1464 aaPredicted RBP19.67■□□□□ 0.74
NDFIP1-204ENST00000509436 SSC5DA1L4H1 1573 aa19.67■□□□□ 0.74
NDFIP1-204ENST00000509436 AK9Q5TCS8 1911 aa19.67■□□□□ 0.74
NDFIP1-204ENST00000509436 USP17L3A6NCW0 530 aa19.67■□□□□ 0.74
NDFIP1-204ENST00000509436 USP17L4A6NCW7 530 aa19.67■□□□□ 0.74
NDFIP1-204ENST00000509436 TAF5LO75529 589 aa19.67■□□□□ 0.74
NDFIP1-204ENST00000509436 UFL1O94874 794 aa19.67■□□□□ 0.74
NDFIP1-204ENST00000509436 IFIT1P09914 478 aaKnown RBP19.67■□□□□ 0.74
NDFIP1-204ENST00000509436 KCNJ4P48050 445 aa19.67■□□□□ 0.74
NDFIP1-204ENST00000509436 PDE1AP54750 535 aa19.67■□□□□ 0.74
NDFIP1-204ENST00000509436 USP17L1Q7RTZ2 530 aa19.67■□□□□ 0.74
NDFIP1-204ENST00000509436 DPF3Q92784 378 aa19.67■□□□□ 0.74
NDFIP1-204ENST00000509436 SHISA4Q96DD7 197 aa19.67■□□□□ 0.74
NDFIP1-204ENST00000509436 SLC10A4Q96EP9 437 aa19.67■□□□□ 0.74
NDFIP1-204ENST00000509436 ANKIB1Q9P2G1 1089 aa19.67■□□□□ 0.74
NDFIP1-204ENST00000509436 TTC41PQ6P2S7 1318 aa19.67■□□□□ 0.74
NDFIP1-204ENST00000509436 SALL3Q9BXA9 1300 aa19.67■□□□□ 0.74
NDFIP1-204ENST00000509436 TESPA1A2RU30 521 aaPredicted RBP19.66■□□□□ 0.74
NDFIP1-204ENST00000509436 G3V3G9 751 aa19.66■□□□□ 0.74
NDFIP1-204ENST00000509436 ERC2O15083 957 aa19.66■□□□□ 0.74
NDFIP1-204ENST00000509436 TIMM10P62072 90 aa19.66■□□□□ 0.74
NDFIP1-204ENST00000509436 UBE4AQ14139 1066 aa19.66■□□□□ 0.74
NDFIP1-204ENST00000509436 GORABQ5T7V8 394 aa19.66■□□□□ 0.74
NDFIP1-204ENST00000509436 DCAF8Q5TAQ9 597 aa19.66■□□□□ 0.74
NDFIP1-204ENST00000509436 UBE2Q1Q7Z7E8 422 aa19.66■□□□□ 0.74
NDFIP1-204ENST00000509436 LRCH3Q96II8 777 aa19.66■□□□□ 0.74
NDFIP1-204ENST00000509436 PTPN18Q99952 460 aa19.66■□□□□ 0.74
NDFIP1-204ENST00000509436 COL25A1Q9BXS0 654 aaPredicted RBP19.66■□□□□ 0.74
NDFIP1-204ENST00000509436 OSBPL3Q9H4L5 887 aa19.66■□□□□ 0.74
NDFIP1-204ENST00000509436 STAP2Q9UGK3 403 aa19.66■□□□□ 0.74
NDFIP1-204ENST00000509436 FZD1Q9UP38 647 aa19.66■□□□□ 0.74
NDFIP1-204ENST00000509436 XDHP47989 1333 aa19.66■□□□□ 0.74
NDFIP1-204ENST00000509436 FGFR2P21802 821 aa19.65■□□□□ 0.74
NDFIP1-204ENST00000509436 OTUD7BQ6GQQ9 843 aa19.65■□□□□ 0.74
NDFIP1-204ENST00000509436 PODNQ7Z5L7 613 aa19.65■□□□□ 0.74
NDFIP1-204ENST00000509436 CLMNQ96JQ2 1002 aa19.65■□□□□ 0.74
NDFIP1-204ENST00000509436 DBNDD2Q9BQY9 259 aa19.65■□□□□ 0.74
NDFIP1-204ENST00000509436 ECHDC1Q9NTX5 307 aa19.65■□□□□ 0.74
NDFIP1-204ENST00000509436 DBNLQ9UJU6 430 aaKnown RBP19.65■□□□□ 0.74
NDFIP1-204ENST00000509436 GGA1Q9UJY5 639 aa19.65■□□□□ 0.74
NDFIP1-204ENST00000509436 LEMD3Q9Y2U8 911 aa19.65■□□□□ 0.74
NDFIP1-204ENST00000509436 ZSWIM8A7E2V4 1837 aa19.65■□□□□ 0.74
NDFIP1-204ENST00000509436 UNCXA6NJT0 531 aa19.64■□□□□ 0.73
NDFIP1-204ENST00000509436 APOBEC3FQ8IUX4 373 aaKnown RBP19.64■□□□□ 0.73
NDFIP1-204ENST00000509436 XAGE2Q96GT9 111 aa19.64■□□□□ 0.73
NDFIP1-204ENST00000509436 TLR7Q9NYK1 1049 aaKnown RBP19.64■□□□□ 0.73
NDFIP1-204ENST00000509436 MYH13Q9UKX3 1938 aa19.63■□□□□ 0.73
NDFIP1-204ENST00000509436 ZNF804BA4D1E1 1349 aa19.63■□□□□ 0.73
NDFIP1-204ENST00000509436 ATP2B4P23634 1241 aa19.63■□□□□ 0.73
NDFIP1-204ENST00000509436 GJA5P36382 358 aa19.63■□□□□ 0.73
NDFIP1-204ENST00000509436 ARHGEF6Q15052 776 aa19.63■□□□□ 0.73
NDFIP1-204ENST00000509436 CCDC158Q5M9N0 1113 aa19.63■□□□□ 0.73
NDFIP1-204ENST00000509436 GLRX3O76003 335 aaKnown RBP19.62■□□□□ 0.73
NDFIP1-204ENST00000509436 MYCP01106 439 aaPredicted RBP19.62■□□□□ 0.73
NDFIP1-204ENST00000509436 ADORA1P30542 326 aa19.62■□□□□ 0.73
NDFIP1-204ENST00000509436 DACT2Q5SW24 774 aa19.62■□□□□ 0.73
NDFIP1-204ENST00000509436 TTC22Q5TAA0 569 aa19.62■□□□□ 0.73
NDFIP1-204ENST00000509436 SH3TC2Q8TF17 1288 aa19.62■□□□□ 0.73
NDFIP1-204ENST00000509436 ECM29Q5VYK3 1845 aa19.62■□□□□ 0.73
NDFIP1-204ENST00000509436 OTOFQ9HC10 1997 aa19.61■□□□□ 0.73
NDFIP1-204ENST00000509436 MMP14P50281 582 aa19.61■□□□□ 0.73
NDFIP1-204ENST00000509436 TTC39AQ5SRH9 613 aa19.61■□□□□ 0.73
NDFIP1-204ENST00000509436 TSHZ3Q63HK5 1081 aa19.61■□□□□ 0.73
NDFIP1-204ENST00000509436 GPR153Q6NV75 609 aa19.61■□□□□ 0.73
NDFIP1-204ENST00000509436 OGFOD1Q8N543 542 aa19.61■□□□□ 0.73
NDFIP1-204ENST00000509436 ZBED3Q96IU2 234 aaPredicted RBP19.61■□□□□ 0.73
NDFIP1-204ENST00000509436 MXD3Q9BW11 206 aa19.6■□□□□ 0.73
NDFIP1-204ENST00000509436 STXBP5LQ9Y2K9 1186 aa19.6■□□□□ 0.73
NDFIP1-204ENST00000509436 MYO3BQ8WXR4 1341 aa19.59■□□□□ 0.73
NDFIP1-204ENST00000509436 SNAP23O00161 211 aa19.59■□□□□ 0.73
NDFIP1-204ENST00000509436 ATP5JP18859 108 aa19.59■□□□□ 0.73
NDFIP1-204ENST00000509436 CAVIN4Q5BKX8 364 aa19.59■□□□□ 0.73
NDFIP1-204ENST00000509436 BMP2KLQ5H9B9 411 aa19.59■□□□□ 0.73
NDFIP1-204ENST00000509436 PI4K2BQ8TCG2 481 aa19.59■□□□□ 0.73
NDFIP1-204ENST00000509436 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.59■□□□□ 0.73
NDFIP1-204ENST00000509436 HTATIP2Q9BUP3 242 aa19.59■□□□□ 0.73
NDFIP1-204ENST00000509436 UQCRFS1P1P0C7P4 283 aa19.58■□□□□ 0.72
NDFIP1-204ENST00000509436 VPS37DQ86XT2 251 aa19.58■□□□□ 0.72
NDFIP1-204ENST00000509436 DEFB129Q9H1M3 183 aa19.58■□□□□ 0.72
NDFIP1-204ENST00000509436 GNL3LQ9NVN8 582 aaKnown RBP19.58■□□□□ 0.72
NDFIP1-204ENST00000509436 NR2E3Q9Y5X4 410 aa19.58■□□□□ 0.72
NDFIP1-204ENST00000509436 CCDC102BQ68D86 513 aa19.57■□□□□ 0.72
NDFIP1-204ENST00000509436 C15orf52Q6ZUT6 534 aaKnown RBP19.57■□□□□ 0.72
NDFIP1-204ENST00000509436 ZNF512BQ96KM6 892 aaPredicted RBP19.57■□□□□ 0.72
NDFIP1-204ENST00000509436 BOLA2Q9H3K6 86 aa19.57■□□□□ 0.72
NDFIP1-204ENST00000509436 TRIM6-TRIM34B2RNG4 842 aa19.56■□□□□ 0.72
NDFIP1-204ENST00000509436 PPP1R12BO60237 982 aaPredicted RBP19.56■□□□□ 0.72
NDFIP1-204ENST00000509436 MTFR1Q15390 333 aa19.56■□□□□ 0.72
NDFIP1-204ENST00000509436 MS4A4AQ96JQ5 239 aa19.56■□□□□ 0.72
NDFIP1-204ENST00000509436 MED23Q9ULK4 1368 aa19.56■□□□□ 0.72
NDFIP1-204ENST00000509436 GSPT1P15170 499 aaKnown RBP19.55■□□□□ 0.72
NDFIP1-204ENST00000509436 ARID4AP29374 1257 aaPredicted RBP19.55■□□□□ 0.72
NDFIP1-204ENST00000509436 PHKA1P46020 1223 aa19.55■□□□□ 0.72
NDFIP1-204ENST00000509436 STRIP1Q5VSL9 837 aa19.55■□□□□ 0.72
NDFIP1-204ENST00000509436 ZNF804AQ7Z570 1209 aa19.55■□□□□ 0.72
NDFIP1-204ENST00000509436 NKX2-3Q8TAU0 364 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms