RNA–Protein interactions for RNA: ENST00000509411.5

FBXO38-215, Transcript of F-box protein 38, human

TSL 3

Gene FBXO38, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FBXO38-215	ENST00000509411	AIDA	Q96BJ3	306 aa		12.03	□□□□□ -0.48
FBXO38-215	ENST00000509411	GPHN	Q9NQX3	736 aa	Predicted RBP	12.03	□□□□□ -0.48
FBXO38-215	ENST00000509411	LIMCH1	Q9UPQ0	1083 aa		12.03	□□□□□ -0.48
FBXO38-215	ENST00000509411	ZDHHC9	Q9Y397	364 aa		12.03	□□□□□ -0.48
FBXO38-215	ENST00000509411	SALL1	Q9NSC2	1324 aa		12.03	□□□□□ -0.48
FBXO38-215	ENST00000509411		H0YIN7	160 aa		12.02	□□□□□ -0.49
FBXO38-215	ENST00000509411	ALDH1B1	P30837	517 aa		12.02	□□□□□ -0.49
FBXO38-215	ENST00000509411	ANTXR2	P58335	489 aa		12.02	□□□□□ -0.49
FBXO38-215	ENST00000509411	EVX2	Q03828	476 aa		12.02	□□□□□ -0.49
FBXO38-215	ENST00000509411	RAB3GAP1	Q15042	981 aa		12.02	□□□□□ -0.49
FBXO38-215	ENST00000509411	NAA16	Q6N069	864 aa	Predicted RBP	12.02	□□□□□ -0.49
FBXO38-215	ENST00000509411		Q6ZUG5	572 aa		12.02	□□□□□ -0.49
FBXO38-215	ENST00000509411	CHST3	Q7LGC8	479 aa		12.02	□□□□□ -0.49
FBXO38-215	ENST00000509411	ZNF804A	Q7Z570	1209 aa		12.02	□□□□□ -0.49
FBXO38-215	ENST00000509411	MB21D2	Q8IYB1	491 aa	Predicted RBP	12.02	□□□□□ -0.49
FBXO38-215	ENST00000509411	MPND	Q8N594	471 aa		12.02	□□□□□ -0.49
FBXO38-215	ENST00000509411	SDR42E1	Q8WUS8	393 aa		12.02	□□□□□ -0.49
FBXO38-215	ENST00000509411	CIZ1	Q9ULV3	898 aa	Predicted RBP	12.02	□□□□□ -0.49
FBXO38-215	ENST00000509411	SLC4A4	Q9Y6R1	1079 aa		12.02	□□□□□ -0.49
FBXO38-215	ENST00000509411	KIAA1551	Q9HCM1	1747 aa		12.02	□□□□□ -0.49
FBXO38-215	ENST00000509411	TIAM2	Q8IVF5	1701 aa		12.01	□□□□□ -0.49
FBXO38-215	ENST00000509411	DLEC1	Q9Y238	1755 aa		12.01	□□□□□ -0.49
FBXO38-215	ENST00000509411	MAGEB6P1	A0A0J9YX57	407 aa		12.01	□□□□□ -0.49
FBXO38-215	ENST00000509411	HSP90AA1	P07900	732 aa	Known RBP	12.01	□□□□□ -0.49
FBXO38-215	ENST00000509411	CTDSPL2	Q05D32	466 aa		12.01	□□□□□ -0.49
FBXO38-215	ENST00000509411	IMMT	Q16891	758 aa	Known RBP	12.01	□□□□□ -0.49
FBXO38-215	ENST00000509411	DHX32	Q7L7V1	743 aa	Known RBP	12.01	□□□□□ -0.49
FBXO38-215	ENST00000509411	CCDC83	Q8IWF9	413 aa		12.01	□□□□□ -0.49
FBXO38-215	ENST00000509411	CTNNA3	Q9UI47	895 aa		12.01	□□□□□ -0.49
FBXO38-215	ENST00000509411	CCDC88A	Q3V6T2	1871 aa		12	□□□□□ -0.49
FBXO38-215	ENST00000509411	ZNF213	O14771	459 aa		12	□□□□□ -0.49
FBXO38-215	ENST00000509411	APP	P05067	770 aa		12	□□□□□ -0.49
FBXO38-215	ENST00000509411	KCNA3	P22001	575 aa		12	□□□□□ -0.49
FBXO38-215	ENST00000509411	DIXDC1	Q155Q3	683 aa		12	□□□□□ -0.49
FBXO38-215	ENST00000509411	DOK7	Q18PE1	504 aa		12	□□□□□ -0.49
FBXO38-215	ENST00000509411	CYB5R4	Q7L1T6	521 aa		12	□□□□□ -0.49
FBXO38-215	ENST00000509411	IL27	Q8NEV9	243 aa		12	□□□□□ -0.49
FBXO38-215	ENST00000509411	WDR66	Q8TBY9	1149 aa		12	□□□□□ -0.49
FBXO38-215	ENST00000509411	TNPO1	Q92973	898 aa	Known RBP	12	□□□□□ -0.49
FBXO38-215	ENST00000509411	INTS4	Q96HW7	963 aa	Known RBP	12	□□□□□ -0.49
FBXO38-215	ENST00000509411	MXD3	Q9BW11	206 aa		12	□□□□□ -0.49
FBXO38-215	ENST00000509411	AGXT2	Q9BYV1	514 aa		12	□□□□□ -0.49
FBXO38-215	ENST00000509411	AATF	Q9NY61	560 aa	Known RBP eCLIP	12	□□□□□ -0.49
FBXO38-215	ENST00000509411	CLEC11A	Q9Y240	323 aa		12	□□□□□ -0.49
FBXO38-215	ENST00000509411	ZMYM6	O95789	1325 aa		12	□□□□□ -0.49
FBXO38-215	ENST00000509411	NEDD4	P46934	1319 aa		12	□□□□□ -0.49
FBXO38-215	ENST00000509411	ZNF646	O15015	1829 aa	Predicted RBP	12	□□□□□ -0.49
FBXO38-215	ENST00000509411	CYP2D7	A0A087X1C5	515 aa		11.99	□□□□□ -0.49
FBXO38-215	ENST00000509411	DPEP1	P16444	411 aa		11.99	□□□□□ -0.49
FBXO38-215	ENST00000509411	DPP8	Q6V1X1	898 aa	Predicted RBP	11.99	□□□□□ -0.49
FBXO38-215	ENST00000509411	CHAMP1	Q96JM3	812 aa		11.99	□□□□□ -0.49
FBXO38-215	ENST00000509411	KCNQ5	Q9NR82	932 aa		11.99	□□□□□ -0.49
FBXO38-215	ENST00000509411	FAM205A	Q6ZU69	1335 aa		11.99	□□□□□ -0.49
FBXO38-215	ENST00000509411	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.98	□□□□□ -0.49
FBXO38-215	ENST00000509411	BRCA1	P38398	1863 aa	Known RBP	11.98	□□□□□ -0.49
FBXO38-215	ENST00000509411	LDHB	P07195	334 aa	Known RBP	11.98	□□□□□ -0.49
FBXO38-215	ENST00000509411	GTF2I	P78347	998 aa		11.98	□□□□□ -0.49
FBXO38-215	ENST00000509411	APOBR	Q0VD83	1088 aa		11.98	□□□□□ -0.49
FBXO38-215	ENST00000509411	CERS5	Q8N5B7	392 aa		11.98	□□□□□ -0.49
FBXO38-215	ENST00000509411	BRF1	Q92994	677 aa		11.98	□□□□□ -0.49
FBXO38-215	ENST00000509411	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.98	□□□□□ -0.49
FBXO38-215	ENST00000509411	COA1	Q9GZY4	146 aa		11.98	□□□□□ -0.49
FBXO38-215	ENST00000509411	NAPB	Q9H115	298 aa		11.98	□□□□□ -0.49
FBXO38-215	ENST00000509411	SENP2	Q9HC62	589 aa		11.98	□□□□□ -0.49
FBXO38-215	ENST00000509411	CWC22	Q9HCG8	908 aa	Known RBP	11.98	□□□□□ -0.49
FBXO38-215	ENST00000509411	ADAMTSL1	Q8N6G6	1762 aa		11.97	□□□□□ -0.49
FBXO38-215	ENST00000509411		B4E1Z4	1266 aa		11.97	□□□□□ -0.49
FBXO38-215	ENST00000509411	PRC1	O43663	620 aa		11.97	□□□□□ -0.49
FBXO38-215	ENST00000509411	CYP2D6	P10635	497 aa		11.97	□□□□□ -0.49
FBXO38-215	ENST00000509411	GNAT2	P19087	354 aa		11.97	□□□□□ -0.49
FBXO38-215	ENST00000509411	TDO2	P48775	406 aa		11.97	□□□□□ -0.49
FBXO38-215	ENST00000509411	TGFB2	P61812	414 aa		11.97	□□□□□ -0.49
FBXO38-215	ENST00000509411	STK3	Q13188	491 aa		11.97	□□□□□ -0.49
FBXO38-215	ENST00000509411	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.97	□□□□□ -0.49
FBXO38-215	ENST00000509411	DZIP1	Q86YF9	867 aa	Known RBP	11.97	□□□□□ -0.49
FBXO38-215	ENST00000509411	STK11IP	Q8N1F8	1099 aa		11.97	□□□□□ -0.49
FBXO38-215	ENST00000509411	NCOA7	Q8NI08	942 aa		11.97	□□□□□ -0.49
FBXO38-215	ENST00000509411	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.97	□□□□□ -0.49
FBXO38-215	ENST00000509411	CNKSR1	Q969H4	720 aa		11.97	□□□□□ -0.49
FBXO38-215	ENST00000509411	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.97	□□□□□ -0.49
FBXO38-215	ENST00000509411	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.97	□□□□□ -0.49
FBXO38-215	ENST00000509411	BRPF3	Q9ULD4	1205 aa		11.97	□□□□□ -0.49
FBXO38-215	ENST00000509411	SCN9A	Q15858	1988 aa		11.97	□□□□□ -0.49
FBXO38-215	ENST00000509411	MYH2	Q9UKX2	1941 aa		11.97	□□□□□ -0.49
FBXO38-215	ENST00000509411	C21orf2	O43822	256 aa		11.96	□□□□□ -0.49
FBXO38-215	ENST00000509411	HMGB1	P09429	215 aa	Known RBP	11.96	□□□□□ -0.49
FBXO38-215	ENST00000509411	PPARA	Q07869	468 aa		11.96	□□□□□ -0.49
FBXO38-215	ENST00000509411	SCRN1	Q12765	414 aa		11.96	□□□□□ -0.49
FBXO38-215	ENST00000509411	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.96	□□□□□ -0.49
FBXO38-215	ENST00000509411	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.96	□□□□□ -0.49
FBXO38-215	ENST00000509411	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.96	□□□□□ -0.49
FBXO38-215	ENST00000509411	DBNDD1	Q9H9R9	158 aa		11.96	□□□□□ -0.49
FBXO38-215	ENST00000509411	COL4A5	P29400	1685 aa		11.96	□□□□□ -0.5
FBXO38-215	ENST00000509411	CDK5RAP2	Q96SN8	1893 aa		11.95	□□□□□ -0.5
FBXO38-215	ENST00000509411	ARFGEF1	Q9Y6D6	1849 aa		11.95	□□□□□ -0.5
FBXO38-215	ENST00000509411	MROH7-TTC4	A0A0A0MT08	1334 aa		11.95	□□□□□ -0.5
FBXO38-215	ENST00000509411	MINDY4B	A8MYZ0	360 aa		11.95	□□□□□ -0.5
FBXO38-215	ENST00000509411	JAK2	O60674	1132 aa		11.95	□□□□□ -0.5
FBXO38-215	ENST00000509411	PFKFB2	O60825	505 aa		11.95	□□□□□ -0.5
FBXO38-215	ENST00000509411	CTDNEP1	O95476	244 aa		11.95	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms