RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 CCDC102BQ68D86 513 aa19.08■□□□□ 0.64
TPM3-219ENST00000509409 CDC42EP5Q6NZY7 148 aa19.08■□□□□ 0.64
TPM3-219ENST00000509409 CD99L2Q8TCZ2 262 aa19.08■□□□□ 0.64
TPM3-219ENST00000509409 FAM151AQ8WW52 585 aa19.08■□□□□ 0.64
TPM3-219ENST00000509409 BRI3BPQ8WY22 251 aa19.08■□□□□ 0.64
TPM3-219ENST00000509409 ZKSCAN4Q969J2 545 aaPredicted RBP19.08■□□□□ 0.64
TPM3-219ENST00000509409 ZNF341Q9BYN7 854 aa19.08■□□□□ 0.64
TPM3-219ENST00000509409 ZFYVE28Q9HCC9 887 aa19.08■□□□□ 0.64
TPM3-219ENST00000509409 AKAP2Q9Y2D5 859 aa19.08■□□□□ 0.64
TPM3-219ENST00000509409 DAGLAQ9Y4D2 1042 aa19.08■□□□□ 0.64
TPM3-219ENST00000509409 WDHD1O75717 1129 aaPredicted RBP19.07■□□□□ 0.64
TPM3-219ENST00000509409 SP3Q02447 781 aa19.07■□□□□ 0.64
TPM3-219ENST00000509409 TAF1CQ15572 869 aaPredicted RBP19.07■□□□□ 0.64
TPM3-219ENST00000509409 OTOP1Q7RTM1 612 aa19.07■□□□□ 0.64
TPM3-219ENST00000509409 ERO1BQ86YB8 467 aa19.07■□□□□ 0.64
TPM3-219ENST00000509409 ZGPATQ8N5A5 531 aaKnown RBP19.07■□□□□ 0.64
TPM3-219ENST00000509409 GNAI2P04899 355 aa19.06■□□□□ 0.64
TPM3-219ENST00000509409 TFCP2Q12800 502 aa19.06■□□□□ 0.64
TPM3-219ENST00000509409 ATF7IPQ6VMQ6 1270 aa19.06■□□□□ 0.64
TPM3-219ENST00000509409 CLUAP1Q96AJ1 413 aa19.06■□□□□ 0.64
TPM3-219ENST00000509409 NEUROD6Q96NK8 337 aa19.06■□□□□ 0.64
TPM3-219ENST00000509409 EFCC1Q9HA90 598 aa19.06■□□□□ 0.64
TPM3-219ENST00000509409 ABCF2Q9UG63 623 aa19.06■□□□□ 0.64
TPM3-219ENST00000509409 SNCAIPQ9Y6H5 919 aa19.06■□□□□ 0.64
TPM3-219ENST00000509409 SPDYE5A6NIY4 337 aa19.05■□□□□ 0.64
TPM3-219ENST00000509409 CETPP11597 493 aa19.05■□□□□ 0.64
TPM3-219ENST00000509409 TRIM27P14373 513 aa19.05■□□□□ 0.64
TPM3-219ENST00000509409 TNNQ9UQP3 1299 aa19.05■□□□□ 0.64
TPM3-219ENST00000509409 SALL1Q9NSC2 1324 aa19.04■□□□□ 0.64
TPM3-219ENST00000509409 A0A1B0GUL7 405 aa19.04■□□□□ 0.64
TPM3-219ENST00000509409 NFIAQ12857 509 aa19.04■□□□□ 0.64
TPM3-219ENST00000509409 G3BP1Q13283 466 aaKnown RBP eCLIP19.04■□□□□ 0.641e-6■■■□□ 15.4
TPM3-219ENST00000509409 SNAPC2Q13487 334 aa19.04■□□□□ 0.64
TPM3-219ENST00000509409 GORABQ5T7V8 394 aa19.04■□□□□ 0.64
TPM3-219ENST00000509409 SPTY2D1Q68D10 685 aaPredicted RBP19.04■□□□□ 0.64
TPM3-219ENST00000509409 DZIP1Q86YF9 867 aaKnown RBP19.04■□□□□ 0.64
TPM3-219ENST00000509409 SLF2Q8IX21 1173 aa19.04■□□□□ 0.64
TPM3-219ENST00000509409 FAM43AQ8N2R8 423 aa19.04■□□□□ 0.64
TPM3-219ENST00000509409 XAGE2Q96GT9 111 aa19.04■□□□□ 0.64
TPM3-219ENST00000509409 ARAP2Q8WZ64 1704 aa19.03■□□□□ 0.64
TPM3-219ENST00000509409 IRF6O14896 467 aa19.03■□□□□ 0.64
TPM3-219ENST00000509409 INPP5BP32019 993 aa19.03■□□□□ 0.64
TPM3-219ENST00000509409 PPIL2Q13356 520 aa19.03■□□□□ 0.64
TPM3-219ENST00000509409 MVPQ14764 893 aaKnown RBP19.03■□□□□ 0.64
TPM3-219ENST00000509409 ARHGEF6Q15052 776 aa19.03■□□□□ 0.64
TPM3-219ENST00000509409 PTPN22Q9Y2R2 807 aa19.03■□□□□ 0.64
TPM3-219ENST00000509409 PPATQ06203 517 aa19.02■□□□□ 0.64
TPM3-219ENST00000509409 MTX1Q13505 466 aa19.02■□□□□ 0.64
TPM3-219ENST00000509409 RASGRF1Q13972 1273 aa19.02■□□□□ 0.64
TPM3-219ENST00000509409 FAM198AQ9UFP1 575 aa19.02■□□□□ 0.64
TPM3-219ENST00000509409 BTBD19C9JJ37 291 aa19.01■□□□□ 0.63
TPM3-219ENST00000509409 HNRNPUQ00839 825 aaKnown RBP eCLIP19.01■□□□□ 0.63
TPM3-219ENST00000509409 ZKSCAN2Q63HK3 967 aa19.01■□□□□ 0.63
TPM3-219ENST00000509409 ERICH6Q7L0X2 663 aa19.01■□□□□ 0.63
TPM3-219ENST00000509409 ZSCAN29Q8IWY8 852 aaPredicted RBP19.01■□□□□ 0.63
TPM3-219ENST00000509409 ZFPM1Q8IX07 1006 aa19.01■□□□□ 0.63
TPM3-219ENST00000509409 RPAP1Q9BWH6 1393 aaPredicted RBP19.01■□□□□ 0.63
TPM3-219ENST00000509409 RGS3P49796 1198 aa19■□□□□ 0.63
TPM3-219ENST00000509409 MIER1Q8N108 512 aa19■□□□□ 0.63
TPM3-219ENST00000509409 ZNF112Q9UJU3 913 aa19■□□□□ 0.63
TPM3-219ENST00000509409 PNMA6EA0A0J9YXQ4 647 aa18.99■□□□□ 0.63
TPM3-219ENST00000509409 ZBTB22O15209 634 aa18.99■□□□□ 0.63
TPM3-219ENST00000509409 KIF22Q14807 665 aa18.99■□□□□ 0.63
TPM3-219ENST00000509409 TMEM57Q8N5G2 664 aa18.99■□□□□ 0.63
TPM3-219ENST00000509409 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.99■□□□□ 0.63
TPM3-219ENST00000509409 ENTPD3O75355 529 aa18.98■□□□□ 0.63
TPM3-219ENST00000509409 BTDP43251 543 aa18.98■□□□□ 0.63
TPM3-219ENST00000509409 PICALMQ13492 652 aa18.98■□□□□ 0.63
TPM3-219ENST00000509409 IDI2Q9BXS1 227 aa18.98■□□□□ 0.63
TPM3-219ENST00000509409 ZCCHC17Q9NP64 241 aaKnown RBP18.98■□□□□ 0.63
TPM3-219ENST00000509409 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.98■□□□□ 0.63
TPM3-219ENST00000509409 PDS5AQ29RF7 1337 aaKnown RBP18.98■□□□□ 0.63
TPM3-219ENST00000509409 TLR2O60603 784 aa18.97■□□□□ 0.63
TPM3-219ENST00000509409 MECOMQ03112 1051 aa18.97■□□□□ 0.63
TPM3-219ENST00000509409 OS9Q13438 667 aaPredicted RBP18.97■□□□□ 0.63
TPM3-219ENST00000509409 FTSJ3Q8IY81 847 aaKnown RBP18.97■□□□□ 0.63
TPM3-219ENST00000509409 FAM163AQ96GL9 167 aaPredicted RBP18.97■□□□□ 0.63
TPM3-219ENST00000509409 HMG20BQ9P0W2 317 aa18.97■□□□□ 0.63
TPM3-219ENST00000509409 GAKO14976 1311 aa18.97■□□□□ 0.63
TPM3-219ENST00000509409 OTOFQ9HC10 1997 aa18.96■□□□□ 0.63
TPM3-219ENST00000509409 LDHCP07864 332 aa18.96■□□□□ 0.63
TPM3-219ENST00000509409 GSTO1P78417 241 aa18.96■□□□□ 0.63
TPM3-219ENST00000509409 CAP1Q01518 475 aa18.96■□□□□ 0.63
TPM3-219ENST00000509409 NOL9Q5SY16 702 aaKnown RBP18.96■□□□□ 0.63
TPM3-219ENST00000509409 DIEXFQ68CQ4 756 aaKnown RBP18.96■□□□□ 0.63
TPM3-219ENST00000509409 TBC1D9Q6ZT07 1266 aa18.96■□□□□ 0.63
TPM3-219ENST00000509409 SPATA5Q8NB90 893 aa18.96■□□□□ 0.63
TPM3-219ENST00000509409 PICK1Q9NRD5 415 aa18.96■□□□□ 0.63
TPM3-219ENST00000509409 RAI14Q9P0K7 980 aa18.96■□□□□ 0.63
TPM3-219ENST00000509409 MROH7-TTC4A0A0A0MT08 1334 aa18.96■□□□□ 0.63
TPM3-219ENST00000509409 PDHXO00330 501 aa18.95■□□□□ 0.62
TPM3-219ENST00000509409 ECM2O94769 699 aaPredicted RBP18.95■□□□□ 0.62
TPM3-219ENST00000509409 ANKRD23Q86SG2 305 aa18.95■□□□□ 0.62
TPM3-219ENST00000509409 NBPF11Q86T75 865 aa18.95■□□□□ 0.62
TPM3-219ENST00000509409 UQCRFS1P1P0C7P4 283 aa18.94■□□□□ 0.62
TPM3-219ENST00000509409 ATP8B2P98198 1209 aa18.94■□□□□ 0.62
TPM3-219ENST00000509409 PI16Q6UXB8 463 aa18.94■□□□□ 0.62
TPM3-219ENST00000509409 TMEM106CQ9BVX2 250 aa18.94■□□□□ 0.62
TPM3-219ENST00000509409 DDX4Q9NQI0 724 aaKnown RBP18.94■□□□□ 0.62
TPM3-219ENST00000509409 LRP2BPQ9P2M1 347 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms