RNA–Protein interactions for RNA: ENST00000509293.1

SPOCK1-206, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-206ENST00000509293 LSG1Q9H089 658 aaKnown RBP17.17■□□□□ 0.34
SPOCK1-206ENST00000509293 ALX1Q15699 326 aa17.16■□□□□ 0.34
SPOCK1-206ENST00000509293 CFAP100Q494V2 611 aa17.16■□□□□ 0.34
SPOCK1-206ENST00000509293 GIMAP6Q6P9H5 292 aa17.16■□□□□ 0.34
SPOCK1-206ENST00000509293 LCORLQ8N3X6 602 aa17.16■□□□□ 0.34
SPOCK1-206ENST00000509293 MAP4K1Q92918 833 aa17.16■□□□□ 0.34
SPOCK1-206ENST00000509293 ZBED3Q96IU2 234 aaPredicted RBP17.16■□□□□ 0.34
SPOCK1-206ENST00000509293 CRNKL1Q9BZJ0 848 aaKnown RBP17.16■□□□□ 0.34
SPOCK1-206ENST00000509293 ARMT1Q9H993 441 aa17.16■□□□□ 0.34
SPOCK1-206ENST00000509293 ANO2Q9NQ90 1003 aa17.16■□□□□ 0.34
SPOCK1-206ENST00000509293 AATFQ9NY61 560 aaKnown RBP eCLIP17.16■□□□□ 0.34
SPOCK1-206ENST00000509293 GPRC5DQ9NZD1 345 aa17.16■□□□□ 0.34
SPOCK1-206ENST00000509293 ZMYM6O95789 1325 aa17.16■□□□□ 0.34
SPOCK1-206ENST00000509293 GLTPD2A6NH11 291 aa17.15■□□□□ 0.34
SPOCK1-206ENST00000509293 SPDYE2BA6NHP3 402 aa17.15■□□□□ 0.34
SPOCK1-206ENST00000509293 PATL2C9JE40 543 aaKnown RBP17.15■□□□□ 0.34
SPOCK1-206ENST00000509293 SEC24BO95487 1268 aa17.15■□□□□ 0.34
SPOCK1-206ENST00000509293 SPDYE6P0CI01 402 aa17.15■□□□□ 0.34
SPOCK1-206ENST00000509293 HSPD1P10809 573 aaKnown RBP17.15■□□□□ 0.34
SPOCK1-206ENST00000509293 RHBDL3P58872 404 aa17.15■□□□□ 0.34
SPOCK1-206ENST00000509293 DLGAP5Q15398 846 aa17.15■□□□□ 0.34
SPOCK1-206ENST00000509293 CCDC129Q6ZRS4 1044 aa17.15■□□□□ 0.34
SPOCK1-206ENST00000509293 USP26Q9BXU7 913 aa17.15■□□□□ 0.34
SPOCK1-206ENST00000509293 CNOT7Q9UIV1 285 aaKnown RBP17.15■□□□□ 0.34
SPOCK1-206ENST00000509293 H7C1D1 291 aa17.14■□□□□ 0.33
SPOCK1-206ENST00000509293 FOXP2O15409 715 aa17.14■□□□□ 0.33
SPOCK1-206ENST00000509293 NPM3O75607 178 aaKnown RBP17.14■□□□□ 0.33
SPOCK1-206ENST00000509293 DDNO94850 711 aaPredicted RBP17.14■□□□□ 0.33
SPOCK1-206ENST00000509293 DYNLL1P63167 89 aaKnown RBP17.14■□□□□ 0.33
SPOCK1-206ENST00000509293 MICALL2Q8IY33 904 aa17.14■□□□□ 0.33
SPOCK1-206ENST00000509293 UPF2Q9HAU5 1272 aaKnown RBP17.14■□□□□ 0.33
SPOCK1-206ENST00000509293 MYOZ2Q9NPC6 264 aa17.14■□□□□ 0.33
SPOCK1-206ENST00000509293 ATP8A2Q9NTI2 1148 aa17.14■□□□□ 0.33
SPOCK1-206ENST00000509293 GSG1L2A8MUP6 293 aa17.13■□□□□ 0.33
SPOCK1-206ENST00000509293 RBM5P52756 815 aaKnown RBP eCLIP17.13■□□□□ 0.33
SPOCK1-206ENST00000509293 PTH1RQ03431 593 aa17.13■□□□□ 0.33
SPOCK1-206ENST00000509293 CDC42EP5Q6NZY7 148 aa17.13■□□□□ 0.33
SPOCK1-206ENST00000509293 NACAP1Q9BZK3 213 aa17.13■□□□□ 0.33
SPOCK1-206ENST00000509293 CTNNA3Q9UI47 895 aa17.13■□□□□ 0.33
SPOCK1-206ENST00000509293 SLC4A4Q9Y6R1 1079 aa17.13■□□□□ 0.33
SPOCK1-206ENST00000509293 U3KPZ7 1027 aaPredicted RBP17.13■□□□□ 0.33
SPOCK1-206ENST00000509293 LMOD1P29536 600 aaPredicted RBP17.12■□□□□ 0.33
SPOCK1-206ENST00000509293 VPS53Q5VIR6 699 aa17.12■□□□□ 0.33
SPOCK1-206ENST00000509293 FKBP1CQ5VVH2 108 aa17.12■□□□□ 0.33
SPOCK1-206ENST00000509293 TEX11Q8IYF3 940 aa17.12■□□□□ 0.33
SPOCK1-206ENST00000509293 SH3RF3Q8TEJ3 882 aaPredicted RBP17.12■□□□□ 0.33
SPOCK1-206ENST00000509293 PRMT6Q96LA8 375 aaPredicted RBP17.12■□□□□ 0.33
SPOCK1-206ENST00000509293 IDI2Q9BXS1 227 aa17.12■□□□□ 0.33
SPOCK1-206ENST00000509293 USP40Q9NVE5 1235 aa17.12■□□□□ 0.33
SPOCK1-206ENST00000509293 MKRN1Q9UHC7 482 aaKnown RBP17.12■□□□□ 0.33
SPOCK1-206ENST00000509293 MYO1BO43795 1136 aa17.11■□□□□ 0.33
SPOCK1-206ENST00000509293 IFNL3Q8IZI9 196 aa17.11■□□□□ 0.33
SPOCK1-206ENST00000509293 DDRGK1Q96HY6 314 aa17.11■□□□□ 0.33
SPOCK1-206ENST00000509293 WNT10BO00744 389 aa17.1■□□□□ 0.33
SPOCK1-206ENST00000509293 PRKAB2O43741 272 aa17.1■□□□□ 0.33
SPOCK1-206ENST00000509293 WDHD1O75717 1129 aaPredicted RBP17.1■□□□□ 0.33
SPOCK1-206ENST00000509293 FGAP02671 866 aa17.1■□□□□ 0.33
SPOCK1-206ENST00000509293 APPP05067 770 aa17.1■□□□□ 0.33
SPOCK1-206ENST00000509293 NECTIN1Q15223 517 aa17.1■□□□□ 0.33
SPOCK1-206ENST00000509293 KIF4BQ2VIQ3 1234 aa17.1■□□□□ 0.33
SPOCK1-206ENST00000509293 SPDYE2Q495Y8 402 aa17.1■□□□□ 0.33
SPOCK1-206ENST00000509293 KCNB2Q92953 911 aa17.1■□□□□ 0.33
SPOCK1-206ENST00000509293 DCP1AQ9NPI6 582 aaPredicted RBP17.1■□□□□ 0.33
SPOCK1-206ENST00000509293 ADARB2Q9NS39 739 aaKnown RBP17.1■□□□□ 0.33
SPOCK1-206ENST00000509293 RBM8AQ9Y5S9 174 aaKnown RBP17.1■□□□□ 0.33
SPOCK1-206ENST00000509293 SHTN1A0MZ66 631 aa17.09■□□□□ 0.33
SPOCK1-206ENST00000509293 IQCA1LA6NCM1 817 aa17.09■□□□□ 0.33
SPOCK1-206ENST00000509293 MCCP23508 829 aa17.09■□□□□ 0.33
SPOCK1-206ENST00000509293 HSPA4P34932 840 aa17.09■□□□□ 0.33
SPOCK1-206ENST00000509293 EPS15P42566 896 aa17.09■□□□□ 0.33
SPOCK1-206ENST00000509293 USP5P45974 858 aa17.09■□□□□ 0.33
SPOCK1-206ENST00000509293 RBM25P49756 843 aaKnown RBP17.09■□□□□ 0.33
SPOCK1-206ENST00000509293 SBK1Q52WX2 424 aa17.09■□□□□ 0.33
SPOCK1-206ENST00000509293 IL17RAQ96F46 866 aa17.09■□□□□ 0.33
SPOCK1-206ENST00000509293 NAPBQ9H115 298 aa17.09■□□□□ 0.33
SPOCK1-206ENST00000509293 EPB41L4AQ9HCS5 686 aaPredicted RBP17.09■□□□□ 0.33
SPOCK1-206ENST00000509293 TMOD2Q9NZR1 351 aa17.09■□□□□ 0.33
SPOCK1-206ENST00000509293 ZNF70Q9UC06 446 aaPredicted RBP17.09■□□□□ 0.33
SPOCK1-206ENST00000509293 PCDHAC2Q9Y5I4 1007 aa17.09■□□□□ 0.33
SPOCK1-206ENST00000509293 ADAMTSL1Q8N6G6 1762 aa17.08■□□□□ 0.33
SPOCK1-206ENST00000509293 WDR90Q96KV7 1748 aa17.08■□□□□ 0.32
SPOCK1-206ENST00000509293 ENTPD3O75355 529 aa17.08■□□□□ 0.32
SPOCK1-206ENST00000509293 TSGA10IPQ3SY00 556 aa17.08■□□□□ 0.32
SPOCK1-206ENST00000509293 RNF20Q5VTR2 975 aa17.08■□□□□ 0.32
SPOCK1-206ENST00000509293 TGFBRAP1Q8WUH2 860 aa17.08■□□□□ 0.32
SPOCK1-206ENST00000509293 SDR42E1Q8WUS8 393 aa17.08■□□□□ 0.32
SPOCK1-206ENST00000509293 TDRD3Q9H7E2 651 aaKnown RBP17.08■□□□□ 0.32
SPOCK1-206ENST00000509293 HACL1Q9UJ83 578 aa17.08■□□□□ 0.32
SPOCK1-206ENST00000509293 TAOK2Q9UL54 1235 aa17.08■□□□□ 0.32
SPOCK1-206ENST00000509293 COL2A1P02458 1487 aaPredicted RBP17.07■□□□□ 0.32
SPOCK1-206ENST00000509293 FLT1P17948 1338 aa17.07■□□□□ 0.32
SPOCK1-206ENST00000509293 TDO2P48775 406 aa17.07■□□□□ 0.32
SPOCK1-206ENST00000509293 ANAPC15P60006 121 aa17.07■□□□□ 0.32
SPOCK1-206ENST00000509293 NBPF9Q3BBW0 867 aa17.07■□□□□ 0.32
SPOCK1-206ENST00000509293 USP50Q70EL3 339 aaPredicted RBP17.07■□□□□ 0.32
SPOCK1-206ENST00000509293 SAMD7Q7Z3H4 446 aa17.07■□□□□ 0.32
SPOCK1-206ENST00000509293 FAM83AQ86UY5 434 aa17.07■□□□□ 0.32
SPOCK1-206ENST00000509293 TBC1D32Q96NH3 1257 aa17.07■□□□□ 0.32
SPOCK1-206ENST00000509293 C22orf23Q9BZE7 217 aa17.07■□□□□ 0.32
SPOCK1-206ENST00000509293 ARPP21Q9UBL0 812 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms