RNA–Protein interactions for RNA: ENST00000509177.1

TUSC3-208, Transcript of tumor suppressor candidate 3, humanhuman

TSL 2

Gene TUSC3, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-208ENST00000509177 ZNF70Q9UC06 446 aaPredicted RBP13.45□□□□□ -0.26
TUSC3-208ENST00000509177 RANBP2P49792 3224 aaKnown RBP13.45□□□□□ -0.26
TUSC3-208ENST00000509177 TNNI2P48788 182 aa13.44□□□□□ -0.26
TUSC3-208ENST00000509177 SPDYE2Q495Y8 402 aa13.44□□□□□ -0.26
TUSC3-208ENST00000509177 CDAN1Q8IWY9 1227 aa13.44□□□□□ -0.26
TUSC3-208ENST00000509177 TMEM57Q8N5G2 664 aa13.44□□□□□ -0.26
TUSC3-208ENST00000509177 OPTNQ96CV9 577 aa13.44□□□□□ -0.26
TUSC3-208ENST00000509177 ELP3Q9H9T3 547 aa13.44□□□□□ -0.26
TUSC3-208ENST00000509177 TMOD2Q9NZR1 351 aa13.44□□□□□ -0.26
TUSC3-208ENST00000509177 MAST3O60307 1309 aa13.43□□□□□ -0.26
TUSC3-208ENST00000509177 ZBED9Q6R2W3 1325 aa13.43□□□□□ -0.26
TUSC3-208ENST00000509177 TCP10L2B9ZVM9 353 aa13.43□□□□□ -0.26
TUSC3-208ENST00000509177 FXR1P51114 621 aaKnown RBP eCLIP13.43□□□□□ -0.26
TUSC3-208ENST00000509177 HDLBPQ00341 1268 aaKnown RBP13.43□□□□□ -0.26
TUSC3-208ENST00000509177 G3BP1Q13283 466 aaKnown RBP eCLIP13.43□□□□□ -0.26
TUSC3-208ENST00000509177 GRIK5Q16478 980 aa13.43□□□□□ -0.26
TUSC3-208ENST00000509177 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.43□□□□□ -0.26
TUSC3-208ENST00000509177 ZNF333Q96JL9 665 aa13.43□□□□□ -0.26
TUSC3-208ENST00000509177 TEPSINQ96N21 525 aa13.43□□□□□ -0.26
TUSC3-208ENST00000509177 SUGT1Q9Y2Z0 365 aa13.43□□□□□ -0.26
TUSC3-208ENST00000509177 GORABQ5T7V8 394 aa13.42□□□□□ -0.26
TUSC3-208ENST00000509177 BRI3BPQ8WY22 251 aa13.42□□□□□ -0.26
TUSC3-208ENST00000509177 NEUROD6Q96NK8 337 aa13.42□□□□□ -0.26
TUSC3-208ENST00000509177 DENND2AQ9ULE3 1009 aa13.42□□□□□ -0.26
TUSC3-208ENST00000509177 AKAP2Q9Y2D5 859 aa13.42□□□□□ -0.26
TUSC3-208ENST00000509177 TIMM10P62072 90 aa13.41□□□□□ -0.26
TUSC3-208ENST00000509177 TFCP2Q12800 502 aa13.41□□□□□ -0.26
TUSC3-208ENST00000509177 MTX1Q13505 466 aa13.41□□□□□ -0.26
TUSC3-208ENST00000509177 ITPRIPQ8IWB1 547 aa13.41□□□□□ -0.26
TUSC3-208ENST00000509177 FAM43AQ8N2R8 423 aa13.41□□□□□ -0.26
TUSC3-208ENST00000509177 TMEM39BQ9GZU3 492 aa13.41□□□□□ -0.26
TUSC3-208ENST00000509177 PTCH2Q9Y6C5 1203 aa13.41□□□□□ -0.26
TUSC3-208ENST00000509177 CCL15-CCL14A0A0B4J2E2 113 aa13.4□□□□□ -0.26
TUSC3-208ENST00000509177 LDHBP07195 334 aaKnown RBP13.4□□□□□ -0.26
TUSC3-208ENST00000509177 ADORA1P30542 326 aa13.4□□□□□ -0.26
TUSC3-208ENST00000509177 PHKA1P46020 1223 aa13.4□□□□□ -0.26
TUSC3-208ENST00000509177 OS9Q13438 667 aaPredicted RBP13.4□□□□□ -0.26
TUSC3-208ENST00000509177 VGLL4Q14135 290 aa13.4□□□□□ -0.26
TUSC3-208ENST00000509177 CCL15Q16663 113 aa13.4□□□□□ -0.26
TUSC3-208ENST00000509177 SLC9C1Q4G0N8 1177 aa13.4□□□□□ -0.26
TUSC3-208ENST00000509177 HHIPL2Q6UWX4 724 aa13.4□□□□□ -0.26
TUSC3-208ENST00000509177 TMEM106CQ9BVX2 250 aa13.4□□□□□ -0.26
TUSC3-208ENST00000509177 MRIQ9BWK5 157 aa13.4□□□□□ -0.26
TUSC3-208ENST00000509177 COLQQ9Y215 455 aaPredicted RBP13.4□□□□□ -0.26
TUSC3-208ENST00000509177 TRIOBPQ9H2D6 2365 aa13.4□□□□□ -0.26
TUSC3-208ENST00000509177 A0A1B0GUL7 405 aa13.39□□□□□ -0.27
TUSC3-208ENST00000509177 SEMA3EO15041 775 aa13.39□□□□□ -0.27
TUSC3-208ENST00000509177 GTF2A2P52657 109 aa13.39□□□□□ -0.27
TUSC3-208ENST00000509177 CACNB3P54284 484 aa13.39□□□□□ -0.27
TUSC3-208ENST00000509177 MVPQ14764 893 aaKnown RBP13.39□□□□□ -0.27
TUSC3-208ENST00000509177 TAF1CQ15572 869 aaPredicted RBP13.39□□□□□ -0.27
TUSC3-208ENST00000509177 CCDC102BQ68D86 513 aa13.39□□□□□ -0.27
TUSC3-208ENST00000509177 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.39□□□□□ -0.27
TUSC3-208ENST00000509177 ZDHHC15Q96MV8 337 aa13.39□□□□□ -0.27
TUSC3-208ENST00000509177 ZFYVE28Q9HCC9 887 aa13.39□□□□□ -0.27
TUSC3-208ENST00000509177 PNMA6EA0A0J9YXQ4 647 aa13.38□□□□□ -0.27
TUSC3-208ENST00000509177 MYCP01106 439 aaPredicted RBP13.38□□□□□ -0.27
TUSC3-208ENST00000509177 MAP3K9P80192 1104 aa13.38□□□□□ -0.27
TUSC3-208ENST00000509177 DIXDC1Q155Q3 683 aa13.38□□□□□ -0.27
TUSC3-208ENST00000509177 APOBEC3HQ6NTF7 200 aaKnown RBP13.38□□□□□ -0.27
TUSC3-208ENST00000509177 NBPF11Q86T75 865 aa13.38□□□□□ -0.27
TUSC3-208ENST00000509177 ZGPATQ8N5A5 531 aaKnown RBP13.38□□□□□ -0.27
TUSC3-208ENST00000509177 OTUD5Q96G74 571 aa13.38□□□□□ -0.27
TUSC3-208ENST00000509177 XAGE2Q96GT9 111 aa13.38□□□□□ -0.27
TUSC3-208ENST00000509177 ARHGAP39Q9C0H5 1083 aa13.38□□□□□ -0.27
TUSC3-208ENST00000509177 C1orf115Q9H7X2 142 aa13.38□□□□□ -0.27
TUSC3-208ENST00000509177 ARAP2Q8WZ64 1704 aa13.38□□□□□ -0.27
TUSC3-208ENST00000509177 ZSWIM8A7E2V4 1837 aa13.37□□□□□ -0.27
TUSC3-208ENST00000509177 MS4A1P11836 297 aa13.37□□□□□ -0.27
TUSC3-208ENST00000509177 PRDX5P30044 214 aa13.37□□□□□ -0.27
TUSC3-208ENST00000509177 ARHGEF6Q15052 776 aa13.37□□□□□ -0.27
TUSC3-208ENST00000509177 SLC4A8Q2Y0W8 1093 aa13.37□□□□□ -0.27
TUSC3-208ENST00000509177 SPTY2D1Q68D10 685 aaPredicted RBP13.37□□□□□ -0.27
TUSC3-208ENST00000509177 SH3TC2Q8TF17 1288 aa13.37□□□□□ -0.27
TUSC3-208ENST00000509177 HOOK2Q96ED9 719 aa13.37□□□□□ -0.27
TUSC3-208ENST00000509177 ABCF2Q9UG63 623 aa13.37□□□□□ -0.27
TUSC3-208ENST00000509177 SURF6O75683 361 aaKnown RBP13.36□□□□□ -0.27
TUSC3-208ENST00000509177 ATP8B2P98198 1209 aa13.36□□□□□ -0.27
TUSC3-208ENST00000509177 DZIP1Q86YF9 867 aaKnown RBP13.36□□□□□ -0.27
TUSC3-208ENST00000509177 SLF2Q8IX21 1173 aa13.36□□□□□ -0.27
TUSC3-208ENST00000509177 USP40Q9NVE5 1235 aa13.36□□□□□ -0.27
TUSC3-208ENST00000509177 DAGLAQ9Y4D2 1042 aa13.36□□□□□ -0.27
TUSC3-208ENST00000509177 CSADQ9Y600 493 aa13.36□□□□□ -0.27
TUSC3-208ENST00000509177 SNCAIPQ9Y6H5 919 aa13.36□□□□□ -0.27
TUSC3-208ENST00000509177 SPDYE5A6NIY4 337 aa13.35□□□□□ -0.27
TUSC3-208ENST00000509177 H0YGN5 161 aa13.35□□□□□ -0.27
TUSC3-208ENST00000509177 TLR2O60603 784 aa13.35□□□□□ -0.27
TUSC3-208ENST00000509177 RLBP1P12271 317 aa13.35□□□□□ -0.27
TUSC3-208ENST00000509177 LACTBP83111 547 aaPredicted RBP13.35□□□□□ -0.27
TUSC3-208ENST00000509177 RASGRF1Q13972 1273 aa13.35□□□□□ -0.27
TUSC3-208ENST00000509177 FKBP1CQ5VVH2 108 aa13.35□□□□□ -0.27
TUSC3-208ENST00000509177 FAM83AQ86UY5 434 aa13.35□□□□□ -0.27
TUSC3-208ENST00000509177 PANK1Q8TE04 598 aa13.35□□□□□ -0.27
TUSC3-208ENST00000509177 SALL1Q9NSC2 1324 aa13.35□□□□□ -0.27
TUSC3-208ENST00000509177 LAMA3Q16787 3333 aa13.34□□□□□ -0.27
TUSC3-208ENST00000509177 BTBD19C9JJ37 291 aa13.34□□□□□ -0.27
TUSC3-208ENST00000509177 ZBTB7BO15156 539 aaPredicted RBP13.34□□□□□ -0.27
TUSC3-208ENST00000509177 CETPP11597 493 aa13.34□□□□□ -0.27
TUSC3-208ENST00000509177 TCP10Q12799 353 aa13.34□□□□□ -0.27
TUSC3-208ENST00000509177 POLA2Q14181 598 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms