RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 AKAP2Q9Y2D5 859 aa15.51■□□□□ 0.07
PDPN-208ENST00000509009 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.51■□□□□ 0.07
PDPN-208ENST00000509009 A0A1B0GUL7 405 aa15.5■□□□□ 0.07
PDPN-208ENST00000509009 GTF2A2P52657 109 aa15.5■□□□□ 0.07
PDPN-208ENST00000509009 SOX10P56693 466 aa15.5■□□□□ 0.07
PDPN-208ENST00000509009 CRHR2Q13324 411 aa15.5■□□□□ 0.07
PDPN-208ENST00000509009 MIGA2Q7L4E1 593 aa15.5■□□□□ 0.07
PDPN-208ENST00000509009 ZKSCAN4Q969J2 545 aaPredicted RBP15.5■□□□□ 0.07
PDPN-208ENST00000509009 XAGE2Q96GT9 111 aa15.5■□□□□ 0.07
PDPN-208ENST00000509009 USP40Q9NVE5 1235 aa15.5■□□□□ 0.07
PDPN-208ENST00000509009 SNCAIPQ9Y6H5 919 aa15.5■□□□□ 0.07
PDPN-208ENST00000509009 ARAP2Q8WZ64 1704 aa15.49■□□□□ 0.07
PDPN-208ENST00000509009 SPDYE5A6NIY4 337 aa15.49■□□□□ 0.07
PDPN-208ENST00000509009 HNRNPUQ00839 825 aaKnown RBP eCLIP15.49■□□□□ 0.07
PDPN-208ENST00000509009 TCP10Q12799 353 aa15.49■□□□□ 0.07
PDPN-208ENST00000509009 NFIAQ12857 509 aa15.49■□□□□ 0.07
PDPN-208ENST00000509009 RASGRF1Q13972 1273 aa15.49■□□□□ 0.07
PDPN-208ENST00000509009 DCAF15Q66K64 600 aa15.49■□□□□ 0.07
PDPN-208ENST00000509009 DIEXFQ68CQ4 756 aaKnown RBP15.49■□□□□ 0.07
PDPN-208ENST00000509009 ERO1BQ86YB8 467 aa15.49■□□□□ 0.07
PDPN-208ENST00000509009 OTUD5Q96G74 571 aa15.49■□□□□ 0.07
PDPN-208ENST00000509009 WRNIP1Q96S55 665 aa15.49■□□□□ 0.07
PDPN-208ENST00000509009 FAM198AQ9UFP1 575 aa15.49■□□□□ 0.07
PDPN-208ENST00000509009 CCL15-CCL14A0A0B4J2E2 113 aa15.48■□□□□ 0.07
PDPN-208ENST00000509009 PNMA6EA0A0J9YXQ4 647 aa15.48■□□□□ 0.07
PDPN-208ENST00000509009 CCL15Q16663 113 aa15.48■□□□□ 0.07
PDPN-208ENST00000509009 ZKSCAN2Q63HK3 967 aa15.48■□□□□ 0.07
PDPN-208ENST00000509009 ZFPM1Q8IX07 1006 aa15.48■□□□□ 0.07
PDPN-208ENST00000509009 ZGPATQ8N5A5 531 aaKnown RBP15.48■□□□□ 0.07
PDPN-208ENST00000509009 TMEM57Q8N5G2 664 aa15.48■□□□□ 0.07
PDPN-208ENST00000509009 FAM163AQ96GL9 167 aaPredicted RBP15.48■□□□□ 0.07
PDPN-208ENST00000509009 NEUROD6Q96NK8 337 aa15.48■□□□□ 0.07
PDPN-208ENST00000509009 ZNF341Q9BYN7 854 aa15.48■□□□□ 0.07
PDPN-208ENST00000509009 ZNF112Q9UJU3 913 aa15.48■□□□□ 0.07
PDPN-208ENST00000509009 PDS5AQ29RF7 1337 aaKnown RBP15.47■□□□□ 0.07
PDPN-208ENST00000509009 INPP5BP32019 993 aa15.47■□□□□ 0.07
PDPN-208ENST00000509009 SP3Q02447 781 aa15.47■□□□□ 0.07
PDPN-208ENST00000509009 G3BP1Q13283 466 aaKnown RBP eCLIP15.47■□□□□ 0.07
PDPN-208ENST00000509009 MVPQ14764 893 aaKnown RBP15.47■□□□□ 0.07
PDPN-208ENST00000509009 OTOP1Q7RTM1 612 aa15.47■□□□□ 0.07
PDPN-208ENST00000509009 FAM43AQ8N2R8 423 aa15.47■□□□□ 0.07
PDPN-208ENST00000509009 ERO1AQ96HE7 468 aa15.47■□□□□ 0.07
PDPN-208ENST00000509009 ABCF2Q9UG63 623 aa15.47■□□□□ 0.07
PDPN-208ENST00000509009 TRIM17Q9Y577 477 aa15.47■□□□□ 0.07
PDPN-208ENST00000509009 RPAP1Q9BWH6 1393 aaPredicted RBP15.47■□□□□ 0.07
PDPN-208ENST00000509009 IRF6O14896 467 aa15.46■□□□□ 0.07
PDPN-208ENST00000509009 CETPP11597 493 aa15.46■□□□□ 0.07
PDPN-208ENST00000509009 PPIL2Q13356 520 aa15.46■□□□□ 0.07
PDPN-208ENST00000509009 SPTY2D1Q68D10 685 aaPredicted RBP15.46■□□□□ 0.07
PDPN-208ENST00000509009 CD99L2Q8TCZ2 262 aa15.46■□□□□ 0.07
PDPN-208ENST00000509009 IDI2Q9BXS1 227 aa15.46■□□□□ 0.07
PDPN-208ENST00000509009 TNRC18O15417 2968 aaPredicted RBP15.46■□□□□ 0.07
PDPN-208ENST00000509009 GAKO14976 1311 aa15.45■□□□□ 0.06
PDPN-208ENST00000509009 ATP8B2P98198 1209 aa15.45■□□□□ 0.06
PDPN-208ENST00000509009 CAP1Q01518 475 aa15.45■□□□□ 0.06
PDPN-208ENST00000509009 PPATQ06203 517 aa15.45■□□□□ 0.06
PDPN-208ENST00000509009 TAF1CQ15572 869 aaPredicted RBP15.45■□□□□ 0.06
PDPN-208ENST00000509009 ZFYVE28Q9HCC9 887 aa15.45■□□□□ 0.06
PDPN-208ENST00000509009 HMG20BQ9P0W2 317 aa15.45■□□□□ 0.06
PDPN-208ENST00000509009 BTBD19C9JJ37 291 aa15.44■□□□□ 0.06
PDPN-208ENST00000509009 ENTPD3O75355 529 aa15.44■□□□□ 0.06
PDPN-208ENST00000509009 RGS3P49796 1198 aa15.44■□□□□ 0.06
PDPN-208ENST00000509009 SNAPC2Q13487 334 aa15.44■□□□□ 0.06
PDPN-208ENST00000509009 POLA2Q14181 598 aa15.44■□□□□ 0.06
PDPN-208ENST00000509009 GORABQ5T7V8 394 aa15.44■□□□□ 0.06
PDPN-208ENST00000509009 ERICH6Q7L0X2 663 aa15.44■□□□□ 0.06
PDPN-208ENST00000509009 DZIP1Q86YF9 867 aaKnown RBP15.44■□□□□ 0.06
PDPN-208ENST00000509009 SLF2Q8IX21 1173 aa15.44■□□□□ 0.06
PDPN-208ENST00000509009 ZNF384Q8TF68 577 aa15.44■□□□□ 0.06
PDPN-208ENST00000509009 EFCC1Q9HA90 598 aa15.44■□□□□ 0.06
PDPN-208ENST00000509009 PTPN22Q9Y2R2 807 aa15.44■□□□□ 0.06
PDPN-208ENST00000509009 OTOFQ9HC10 1997 aa15.44■□□□□ 0.06
PDPN-208ENST00000509009 ZBTB7BO15156 539 aaPredicted RBP15.43■□□□□ 0.06
PDPN-208ENST00000509009 MECOMQ03112 1051 aa15.43■□□□□ 0.06
PDPN-208ENST00000509009 TBC1D9Q6ZT07 1266 aa15.43■□□□□ 0.06
PDPN-208ENST00000509009 SH3BP5LQ7L8J4 393 aa15.43■□□□□ 0.06
PDPN-208ENST00000509009 SPATA5Q8NB90 893 aa15.43■□□□□ 0.06
PDPN-208ENST00000509009 SSH3Q8TE77 659 aa15.43■□□□□ 0.06
PDPN-208ENST00000509009 ZCCHC17Q9NP64 241 aaKnown RBP15.43■□□□□ 0.06
PDPN-208ENST00000509009 PDE4DIPQ5VU43 2346 aa15.43■□□□□ 0.06
PDPN-208ENST00000509009 LAMB1P07942 1786 aa15.42■□□□□ 0.06
PDPN-208ENST00000509009 GPR75-ASB3A0A0A6YYF3 556 aa15.42■□□□□ 0.06
PDPN-208ENST00000509009 PHF20L1A8MW92 1017 aa15.42■□□□□ 0.06
PDPN-208ENST00000509009 WDHD1O75717 1129 aaPredicted RBP15.42■□□□□ 0.06
PDPN-208ENST00000509009 RLBP1P12271 317 aa15.42■□□□□ 0.06
PDPN-208ENST00000509009 MAP3K10Q02779 954 aa15.42■□□□□ 0.06
PDPN-208ENST00000509009 PI16Q6UXB8 463 aa15.42■□□□□ 0.06
PDPN-208ENST00000509009 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.42■□□□□ 0.06
PDPN-208ENST00000509009 KCNH4Q9UQ05 1017 aa15.42■□□□□ 0.06
PDPN-208ENST00000509009 DDTLA6NHG4 134 aaPredicted RBP15.41■□□□□ 0.06
PDPN-208ENST00000509009 TLR2O60603 784 aa15.41■□□□□ 0.06
PDPN-208ENST00000509009 LDHCP07864 332 aa15.41■□□□□ 0.06
PDPN-208ENST00000509009 ARID4AP29374 1257 aaPredicted RBP15.41■□□□□ 0.06
PDPN-208ENST00000509009 BTDP43251 543 aa15.41■□□□□ 0.06
PDPN-208ENST00000509009 RHBDL3P58872 404 aa15.41■□□□□ 0.06
PDPN-208ENST00000509009 NOL9Q5SY16 702 aaKnown RBP15.41■□□□□ 0.06
PDPN-208ENST00000509009 NSUN4Q96CB9 384 aaKnown RBP15.41■□□□□ 0.06
PDPN-208ENST00000509009 GPR108Q9NPR9 543 aa15.41■□□□□ 0.06
PDPN-208ENST00000509009 DDX4Q9NQI0 724 aaKnown RBP15.41■□□□□ 0.06
PDPN-208ENST00000509009 MYH13Q9UKX3 1938 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms