RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 CYP11A1P05108 521 aa4.85□□□□□ -1.63
DEPDC1B-204ENST00000509006 POLR3DP05423 398 aaPredicted RBP4.85□□□□□ -1.63
DEPDC1B-204ENST00000509006 FAM87AP0C7U9 286 aa4.85□□□□□ -1.63
DEPDC1B-204ENST00000509006 PHLDB3Q6NSJ2 640 aa4.85□□□□□ -1.63
DEPDC1B-204ENST00000509006 CILP2Q8IUL8 1156 aa4.85□□□□□ -1.63
DEPDC1B-204ENST00000509006 NETO1Q8TDF5 533 aa4.85□□□□□ -1.63
DEPDC1B-204ENST00000509006 CLEC4MQ9H2X3 399 aaPredicted RBP4.85□□□□□ -1.63
DEPDC1B-204ENST00000509006 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.85□□□□□ -1.63
DEPDC1B-204ENST00000509006 AMOTL2Q9Y2J4 779 aa4.85□□□□□ -1.63
DEPDC1B-204ENST00000509006 A0A096LPE4 126 aa4.84□□□□□ -1.63
DEPDC1B-204ENST00000509006 A0A1W2PPZ6 126 aa4.84□□□□□ -1.63
DEPDC1B-204ENST00000509006 FZD6O60353 706 aa4.84□□□□□ -1.63
DEPDC1B-204ENST00000509006 GRIA4P48058 902 aa4.84□□□□□ -1.63
DEPDC1B-204ENST00000509006 SPRED3Q2MJR0 410 aa4.84□□□□□ -1.63
DEPDC1B-204ENST00000509006 CYP27C1Q4G0S4 372 aa4.84□□□□□ -1.63
DEPDC1B-204ENST00000509006 HP1BP3Q5SSJ5 553 aaPredicted RBP4.84□□□□□ -1.63
DEPDC1B-204ENST00000509006 LCE5AQ5TCM9 118 aa4.84□□□□□ -1.63
DEPDC1B-204ENST00000509006 ALKBH2Q6NS38 261 aa4.84□□□□□ -1.63
DEPDC1B-204ENST00000509006 PI4K2BQ8TCG2 481 aa4.84□□□□□ -1.63
DEPDC1B-204ENST00000509006 CORO1BQ9BR76 489 aa4.84□□□□□ -1.63
DEPDC1B-204ENST00000509006 WDR18Q9BV38 432 aa4.84□□□□□ -1.63
DEPDC1B-204ENST00000509006 PPP1R9AQ9ULJ8 1098 aa4.84□□□□□ -1.63
DEPDC1B-204ENST00000509006 LRRC10BA6NIK2 292 aa4.83□□□□□ -1.64
DEPDC1B-204ENST00000509006 EIF4EBP3O60516 100 aaPredicted RBP4.83□□□□□ -1.64
DEPDC1B-204ENST00000509006 AOC2O75106 756 aa4.83□□□□□ -1.64
DEPDC1B-204ENST00000509006 CCNJLQ8IV13 435 aa4.83□□□□□ -1.64
DEPDC1B-204ENST00000509006 FAM84AQ96KN4 292 aa4.83□□□□□ -1.64
DEPDC1B-204ENST00000509006 CFPP27918 469 aa4.82□□□□□ -1.64
DEPDC1B-204ENST00000509006 PRKCQQ04759 706 aa4.82□□□□□ -1.64
DEPDC1B-204ENST00000509006 EHHADHQ08426 723 aa4.82□□□□□ -1.64
DEPDC1B-204ENST00000509006 PDE3AQ14432 1141 aa4.82□□□□□ -1.64
DEPDC1B-204ENST00000509006 AOC3Q16853 763 aa4.82□□□□□ -1.64
DEPDC1B-204ENST00000509006 KRTAP19-4Q3LI73 84 aa4.82□□□□□ -1.64
DEPDC1B-204ENST00000509006 C1QL4Q86Z23 238 aa4.82□□□□□ -1.64
DEPDC1B-204ENST00000509006 GJD3Q8N144 294 aa4.82□□□□□ -1.64
DEPDC1B-204ENST00000509006 TCF12Q99081 682 aa4.82□□□□□ -1.64
DEPDC1B-204ENST00000509006 KRTAP9-8Q9BYQ0 159 aa4.82□□□□□ -1.64
DEPDC1B-204ENST00000509006 PRDM7Q9NQW5 492 aa4.82□□□□□ -1.64
DEPDC1B-204ENST00000509006 CRIM1Q9NZV1 1036 aa4.82□□□□□ -1.64
DEPDC1B-204ENST00000509006 VAV3Q9UKW4 847 aa4.82□□□□□ -1.64
DEPDC1B-204ENST00000509006 ZNF503-AS2A6NEH8 195 aa4.81□□□□□ -1.64
DEPDC1B-204ENST00000509006 TMPRSS2O15393 492 aa4.81□□□□□ -1.64
DEPDC1B-204ENST00000509006 LEFTY1O75610 366 aa4.81□□□□□ -1.64
DEPDC1B-204ENST00000509006 PPP1R15AO75807 674 aaPredicted RBP4.81□□□□□ -1.64
DEPDC1B-204ENST00000509006 FAM13AO94988 1023 aa4.81□□□□□ -1.64
DEPDC1B-204ENST00000509006 USP5P45974 858 aa4.81□□□□□ -1.64
DEPDC1B-204ENST00000509006 MLANAQ16655 118 aa4.81□□□□□ -1.64
DEPDC1B-204ENST00000509006 IFI16Q16666 785 aaKnown RBP4.81□□□□□ -1.64
DEPDC1B-204ENST00000509006 LCNL1Q6ZST4 164 aa4.81□□□□□ -1.64
DEPDC1B-204ENST00000509006 ZSWIM9Q86XI8 627 aa4.81□□□□□ -1.64
DEPDC1B-204ENST00000509006 CCDC82Q8N4S0 544 aa4.81□□□□□ -1.64
DEPDC1B-204ENST00000509006 HRASLS5Q96KN8 279 aa4.81□□□□□ -1.64
DEPDC1B-204ENST00000509006 LIN7BQ9HAP6 207 aa4.81□□□□□ -1.64
DEPDC1B-204ENST00000509006 ZFYVE28Q9HCC9 887 aa4.81□□□□□ -1.64
DEPDC1B-204ENST00000509006 CCDC87Q9NVE4 849 aa4.81□□□□□ -1.64
DEPDC1B-204ENST00000509006 A0A1W2PP55 124 aa4.8□□□□□ -1.64
DEPDC1B-204ENST00000509006 B3GALT4O96024 378 aa4.8□□□□□ -1.64
DEPDC1B-204ENST00000509006 CEACAM5P06731 702 aa4.8□□□□□ -1.64
DEPDC1B-204ENST00000509006 RAP1GAPP47736 663 aa4.8□□□□□ -1.64
DEPDC1B-204ENST00000509006 FKBP4Q02790 459 aaKnown RBP eCLIP4.8□□□□□ -1.64
DEPDC1B-204ENST00000509006 SF3B2Q13435 895 aaKnown RBP4.8□□□□□ -1.64
DEPDC1B-204ENST00000509006 AAMPQ13685 434 aa4.8□□□□□ -1.64
DEPDC1B-204ENST00000509006 ANGEL2Q5VTE6 544 aaKnown RBP4.8□□□□□ -1.64
DEPDC1B-204ENST00000509006 LILRA6Q6PI73 481 aa4.8□□□□□ -1.64
DEPDC1B-204ENST00000509006 FLAD1Q8NFF5 587 aa4.8□□□□□ -1.64
DEPDC1B-204ENST00000509006 BHLHE22Q8NFJ8 381 aaPredicted RBP4.8□□□□□ -1.64
DEPDC1B-204ENST00000509006 WDR89Q96FK6 387 aaPredicted RBP4.8□□□□□ -1.64
DEPDC1B-204ENST00000509006 TOX2Q96NM4 488 aa4.8□□□□□ -1.64
DEPDC1B-204ENST00000509006 C1orf115Q9H7X2 142 aa4.8□□□□□ -1.64
DEPDC1B-204ENST00000509006 ZFYVE1Q9HBF4 777 aa4.8□□□□□ -1.64
DEPDC1B-204ENST00000509006 PLAGL2Q9UPG8 496 aa4.8□□□□□ -1.64
DEPDC1B-204ENST00000509006 NCANO14594 1321 aa4.79□□□□□ -1.64
DEPDC1B-204ENST00000509006 CARNS1A5YM72 827 aa4.79□□□□□ -1.64
DEPDC1B-204ENST00000509006 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.79□□□□□ -1.64
DEPDC1B-204ENST00000509006 LIG1P18858 919 aa4.79□□□□□ -1.64
DEPDC1B-204ENST00000509006 ITIH2P19823 946 aa4.79□□□□□ -1.64
DEPDC1B-204ENST00000509006 OXCT1P55809 520 aa4.79□□□□□ -1.64
DEPDC1B-204ENST00000509006 KCNMB1Q16558 191 aa4.79□□□□□ -1.64
DEPDC1B-204ENST00000509006 ECM1Q16610 540 aa4.79□□□□□ -1.64
DEPDC1B-204ENST00000509006 SLC23A3Q6PIS1 610 aa4.79□□□□□ -1.64
DEPDC1B-204ENST00000509006 ARHGAP27Q6ZUM4 889 aa4.79□□□□□ -1.64
DEPDC1B-204ENST00000509006 LRRC56Q8IYG6 542 aaPredicted RBP4.79□□□□□ -1.64
DEPDC1B-204ENST00000509006 LIN37Q96GY3 246 aaPredicted RBP4.79□□□□□ -1.64
DEPDC1B-204ENST00000509006 FANCD2OSQ96PS1 177 aa4.79□□□□□ -1.64
DEPDC1B-204ENST00000509006 ZNF576Q9H609 170 aa4.79□□□□□ -1.64
DEPDC1B-204ENST00000509006 PIDD1Q9HB75 910 aa4.79□□□□□ -1.64
DEPDC1B-204ENST00000509006 PRRG2O14669 202 aa4.78□□□□□ -1.64
DEPDC1B-204ENST00000509006 TSPAN15O95858 294 aa4.78□□□□□ -1.64
DEPDC1B-204ENST00000509006 GALNT12Q8IXK2 581 aa4.78□□□□□ -1.64
DEPDC1B-204ENST00000509006 SMYD4Q8IYR2 804 aaPredicted RBP4.78□□□□□ -1.64
DEPDC1B-204ENST00000509006 DDX54Q8TDD1 881 aaKnown RBP4.78□□□□□ -1.64
DEPDC1B-204ENST00000509006 ZC3H12CQ9C0D7 883 aaKnown RBP4.78□□□□□ -1.64
DEPDC1B-204ENST00000509006 MKNK2Q9HBH9 465 aa4.78□□□□□ -1.64
DEPDC1B-204ENST00000509006 LMCD1Q9NZU5 365 aa4.78□□□□□ -1.64
DEPDC1B-204ENST00000509006 SYNGAP1Q96PV0 1343 aa4.77□□□□□ -1.65
DEPDC1B-204ENST00000509006 TMEM265A0A087WTH1 108 aa4.77□□□□□ -1.65
DEPDC1B-204ENST00000509006 ID3Q02535 119 aa4.77□□□□□ -1.65
DEPDC1B-204ENST00000509006 ZNF211Q13398 564 aaPredicted RBP4.77□□□□□ -1.65
DEPDC1B-204ENST00000509006 USPL1Q5W0Q7 1092 aa4.77□□□□□ -1.65
DEPDC1B-204ENST00000509006 ZSCAN18Q8TBC5 510 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms