RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 ZFYVE28Q9HCC9 887 aa16.83■□□□□ 0.28
CCHCR1-227ENST00000508852 TRIM27P14373 513 aa16.82■□□□□ 0.28
CCHCR1-227ENST00000508852 GJA5P36382 358 aa16.82■□□□□ 0.28
CCHCR1-227ENST00000508852 FRAT1Q92837 279 aaPredicted RBP16.82■□□□□ 0.28
CCHCR1-227ENST00000508852 MS4A4AQ96JQ5 239 aa16.82■□□□□ 0.28
CCHCR1-227ENST00000508852 PA2G4Q9UQ80 394 aaKnown RBP16.82■□□□□ 0.28
CCHCR1-227ENST00000508852 DAGLAQ9Y4D2 1042 aa16.82■□□□□ 0.28
CCHCR1-227ENST00000508852 MYH2Q9UKX2 1941 aa16.81■□□□□ 0.28
CCHCR1-227ENST00000508852 CCL15-CCL14A0A0B4J2E2 113 aa16.81■□□□□ 0.28
CCHCR1-227ENST00000508852 MAP4K4O95819 1239 aaPredicted RBP16.81■□□□□ 0.28
CCHCR1-227ENST00000508852 PHKA1P46020 1223 aa16.81■□□□□ 0.28
CCHCR1-227ENST00000508852 CACNB3P54284 484 aa16.81■□□□□ 0.28
CCHCR1-227ENST00000508852 SP3Q02447 781 aa16.81■□□□□ 0.28
CCHCR1-227ENST00000508852 PPATQ06203 517 aa16.81■□□□□ 0.28
CCHCR1-227ENST00000508852 CRHR2Q13324 411 aa16.81■□□□□ 0.28
CCHCR1-227ENST00000508852 PPIL2Q13356 520 aa16.81■□□□□ 0.28
CCHCR1-227ENST00000508852 SNAPC2Q13487 334 aa16.81■□□□□ 0.28
CCHCR1-227ENST00000508852 CCL15Q16663 113 aa16.81■□□□□ 0.28
CCHCR1-227ENST00000508852 ZKSCAN2Q63HK3 967 aa16.81■□□□□ 0.28
CCHCR1-227ENST00000508852 OTUD5Q96G74 571 aa16.81■□□□□ 0.28
CCHCR1-227ENST00000508852 A0A1B0GUL7 405 aa16.8■□□□□ 0.28
CCHCR1-227ENST00000508852 PRDX5P30044 214 aa16.8■□□□□ 0.28
CCHCR1-227ENST00000508852 G3BP1Q13283 466 aaKnown RBP eCLIP16.8■□□□□ 0.28
CCHCR1-227ENST00000508852 GORABQ5T7V8 394 aa16.8■□□□□ 0.28
CCHCR1-227ENST00000508852 CDC42EP5Q6NZY7 148 aa16.8■□□□□ 0.28
CCHCR1-227ENST00000508852 DZIP1Q86YF9 867 aaKnown RBP16.8■□□□□ 0.28
CCHCR1-227ENST00000508852 FAM163AQ96GL9 167 aaPredicted RBP16.8■□□□□ 0.28
CCHCR1-227ENST00000508852 PTPN18Q99952 460 aa16.8■□□□□ 0.28
CCHCR1-227ENST00000508852 R3HDMLQ9H3Y0 253 aa16.8■□□□□ 0.28
CCHCR1-227ENST00000508852 USP40Q9NVE5 1235 aa16.8■□□□□ 0.28
CCHCR1-227ENST00000508852 TRIM17Q9Y577 477 aa16.8■□□□□ 0.28
CCHCR1-227ENST00000508852 IGSF3O75054 1194 aa16.79■□□□□ 0.28
CCHCR1-227ENST00000508852 ENTPD3O75355 529 aa16.79■□□□□ 0.28
CCHCR1-227ENST00000508852 TIMM10P62072 90 aa16.79■□□□□ 0.28
CCHCR1-227ENST00000508852 GSTO1P78417 241 aa16.79■□□□□ 0.28
CCHCR1-227ENST00000508852 TAF1CQ15572 869 aaPredicted RBP16.79■□□□□ 0.28
CCHCR1-227ENST00000508852 OTOP1Q7RTM1 612 aa16.79■□□□□ 0.28
CCHCR1-227ENST00000508852 CDAN1Q8IWY9 1227 aa16.79■□□□□ 0.28
CCHCR1-227ENST00000508852 XAGE2Q96GT9 111 aa16.79■□□□□ 0.28
CCHCR1-227ENST00000508852 IDI2Q9BXS1 227 aa16.79■□□□□ 0.28
CCHCR1-227ENST00000508852 EFCC1Q9HA90 598 aa16.79■□□□□ 0.28
CCHCR1-227ENST00000508852 SNCAIPQ9Y6H5 919 aa16.79■□□□□ 0.28
CCHCR1-227ENST00000508852 GAKO14976 1311 aa16.78■□□□□ 0.28
CCHCR1-227ENST00000508852 BCAR3O75815 825 aa16.78■□□□□ 0.28
CCHCR1-227ENST00000508852 LDHCP07864 332 aa16.78■□□□□ 0.28
CCHCR1-227ENST00000508852 SOX10P56693 466 aa16.78■□□□□ 0.28
CCHCR1-227ENST00000508852 TFCP2Q12800 502 aa16.78■□□□□ 0.28
CCHCR1-227ENST00000508852 DIXDC1Q155Q3 683 aa16.78■□□□□ 0.28
CCHCR1-227ENST00000508852 ERICH6Q7L0X2 663 aa16.78■□□□□ 0.28
CCHCR1-227ENST00000508852 BRI3BPQ8WY22 251 aa16.78■□□□□ 0.28
CCHCR1-227ENST00000508852 NEUROD6Q96NK8 337 aa16.78■□□□□ 0.28
CCHCR1-227ENST00000508852 ABCF2Q9UG63 623 aa16.78■□□□□ 0.28
CCHCR1-227ENST00000508852 ZNF112Q9UJU3 913 aa16.78■□□□□ 0.28
CCHCR1-227ENST00000508852 GNRH1P01148 92 aa16.77■□□□□ 0.28
CCHCR1-227ENST00000508852 UQCRFS1P1P0C7P4 283 aa16.77■□□□□ 0.28
CCHCR1-227ENST00000508852 HNRNPUQ00839 825 aaKnown RBP eCLIP16.77■□□□□ 0.28
CCHCR1-227ENST00000508852 RASGRF1Q13972 1273 aa16.77■□□□□ 0.28
CCHCR1-227ENST00000508852 KIF22Q14807 665 aa16.77■□□□□ 0.28
CCHCR1-227ENST00000508852 NOL9Q5SY16 702 aaKnown RBP16.77■□□□□ 0.28
CCHCR1-227ENST00000508852 FTSJ3Q8IY81 847 aaKnown RBP16.77■□□□□ 0.28
CCHCR1-227ENST00000508852 ZKSCAN4Q969J2 545 aaPredicted RBP16.77■□□□□ 0.28
CCHCR1-227ENST00000508852 DOCK2Q92608 1830 aa16.76■□□□□ 0.27
CCHCR1-227ENST00000508852 NPM3O75607 178 aaKnown RBP16.76■□□□□ 0.27
CCHCR1-227ENST00000508852 ADORA1P30542 326 aa16.76■□□□□ 0.27
CCHCR1-227ENST00000508852 TCP10Q12799 353 aa16.76■□□□□ 0.27
CCHCR1-227ENST00000508852 DIEXFQ68CQ4 756 aaKnown RBP16.76■□□□□ 0.27
CCHCR1-227ENST00000508852 MIGA2Q7L4E1 593 aa16.76■□□□□ 0.27
CCHCR1-227ENST00000508852 GPR108Q9NPR9 543 aa16.76■□□□□ 0.27
CCHCR1-227ENST00000508852 PTPN22Q9Y2R2 807 aa16.76■□□□□ 0.27
CCHCR1-227ENST00000508852 IRF6O14896 467 aa16.75■□□□□ 0.27
CCHCR1-227ENST00000508852 TLR2O60603 784 aa16.75■□□□□ 0.27
CCHCR1-227ENST00000508852 NBPF11Q86T75 865 aa16.75■□□□□ 0.27
CCHCR1-227ENST00000508852 CD99L2Q8TCZ2 262 aa16.75■□□□□ 0.27
CCHCR1-227ENST00000508852 CNKSR2Q8WXI2 1034 aa16.75■□□□□ 0.27
CCHCR1-227ENST00000508852 CLUAP1Q96AJ1 413 aa16.75■□□□□ 0.27
CCHCR1-227ENST00000508852 FAM198AQ9UFP1 575 aa16.75■□□□□ 0.27
CCHCR1-227ENST00000508852 MROH7-TTC4A0A0A0MT08 1334 aa16.74■□□□□ 0.27
CCHCR1-227ENST00000508852 CXCL11O14625 94 aa16.74■□□□□ 0.27
CCHCR1-227ENST00000508852 ARID4AP29374 1257 aaPredicted RBP16.74■□□□□ 0.27
CCHCR1-227ENST00000508852 PRMT2P55345 433 aa16.74■□□□□ 0.27
CCHCR1-227ENST00000508852 NFIAQ12857 509 aa16.74■□□□□ 0.27
CCHCR1-227ENST00000508852 ANKRD23Q86SG2 305 aa16.74■□□□□ 0.27
CCHCR1-227ENST00000508852 ZSCAN29Q8IWY8 852 aaPredicted RBP16.74■□□□□ 0.27
CCHCR1-227ENST00000508852 SPATA5Q8NB90 893 aa16.74■□□□□ 0.27
CCHCR1-227ENST00000508852 PICK1Q9NRD5 415 aa16.74■□□□□ 0.27
CCHCR1-227ENST00000508852 KCNH4Q9UQ05 1017 aa16.74■□□□□ 0.27
CCHCR1-227ENST00000508852 PDE4DIPQ5VU43 2346 aa16.74■□□□□ 0.27
CCHCR1-227ENST00000508852 GPR75-ASB3A0A0A6YYF3 556 aa16.73■□□□□ 0.27
CCHCR1-227ENST00000508852 MS4A1P11836 297 aa16.73■□□□□ 0.27
CCHCR1-227ENST00000508852 RGS3P49796 1198 aa16.73■□□□□ 0.27
CCHCR1-227ENST00000508852 ATP8B2P98198 1209 aa16.73■□□□□ 0.27
CCHCR1-227ENST00000508852 CCDC158Q5M9N0 1113 aa16.73■□□□□ 0.27
CCHCR1-227ENST00000508852 FAM43AQ8N2R8 423 aa16.73■□□□□ 0.27
CCHCR1-227ENST00000508852 TMEM57Q8N5G2 664 aa16.73■□□□□ 0.27
CCHCR1-227ENST00000508852 NOL10Q9BSC4 688 aaKnown RBP16.73■□□□□ 0.27
CCHCR1-227ENST00000508852 BTBD19C9JJ37 291 aa16.72■□□□□ 0.27
CCHCR1-227ENST00000508852 INPP5BP32019 993 aa16.72■□□□□ 0.27
CCHCR1-227ENST00000508852 BTDP43251 543 aa16.72■□□□□ 0.27
CCHCR1-227ENST00000508852 MAP3K10Q02779 954 aa16.72■□□□□ 0.27
CCHCR1-227ENST00000508852 OS9Q13438 667 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms