RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 WDHD1O75717 1129 aaPredicted RBP12.49□□□□□ -0.41
UBE2D3-227ENST00000508818 TRIM27P14373 513 aa12.49□□□□□ -0.41
UBE2D3-227ENST00000508818 TIMM10P62072 90 aa12.49□□□□□ -0.41
UBE2D3-227ENST00000508818 G3BP1Q13283 466 aaKnown RBP eCLIP12.49□□□□□ -0.41
UBE2D3-227ENST00000508818 GORABQ5T7V8 394 aa12.49□□□□□ -0.41
UBE2D3-227ENST00000508818 DCAF15Q66K64 600 aa12.49□□□□□ -0.41
UBE2D3-227ENST00000508818 ZGPATQ8N5A5 531 aaKnown RBP12.49□□□□□ -0.41
UBE2D3-227ENST00000508818 PHKA1P46020 1223 aa12.48□□□□□ -0.41
UBE2D3-227ENST00000508818 GTF2A2P52657 109 aa12.48□□□□□ -0.41
UBE2D3-227ENST00000508818 TFCP2Q12800 502 aa12.48□□□□□ -0.41
UBE2D3-227ENST00000508818 MVPQ14764 893 aaKnown RBP12.48□□□□□ -0.41
UBE2D3-227ENST00000508818 DIXDC1Q155Q3 683 aa12.48□□□□□ -0.41
UBE2D3-227ENST00000508818 SPTY2D1Q68D10 685 aaPredicted RBP12.48□□□□□ -0.41
UBE2D3-227ENST00000508818 CCDC102BQ68D86 513 aa12.48□□□□□ -0.41
UBE2D3-227ENST00000508818 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.48□□□□□ -0.41
UBE2D3-227ENST00000508818 CDAN1Q8IWY9 1227 aa12.48□□□□□ -0.41
UBE2D3-227ENST00000508818 SLF2Q8IX21 1173 aa12.48□□□□□ -0.41
UBE2D3-227ENST00000508818 CFHR5Q9BXR6 569 aa12.48□□□□□ -0.41
UBE2D3-227ENST00000508818 USP40Q9NVE5 1235 aa12.48□□□□□ -0.41
UBE2D3-227ENST00000508818 IGF2BP3O00425 579 aaKnown RBP eCLIP12.47□□□□□ -0.41
UBE2D3-227ENST00000508818 PRDX5P30044 214 aa12.47□□□□□ -0.41
UBE2D3-227ENST00000508818 ADORA1P30542 326 aa12.47□□□□□ -0.41
UBE2D3-227ENST00000508818 RGS19P49795 217 aa12.47□□□□□ -0.41
UBE2D3-227ENST00000508818 TCP10Q12799 353 aa12.47□□□□□ -0.41
UBE2D3-227ENST00000508818 MTX1Q13505 466 aa12.47□□□□□ -0.41
UBE2D3-227ENST00000508818 VGLL4Q14135 290 aa12.47□□□□□ -0.41
UBE2D3-227ENST00000508818 DZIP1Q86YF9 867 aaKnown RBP12.47□□□□□ -0.41
UBE2D3-227ENST00000508818 FTSJ3Q8IY81 847 aaKnown RBP12.47□□□□□ -0.41
UBE2D3-227ENST00000508818 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.47□□□□□ -0.41
UBE2D3-227ENST00000508818 FAM151AQ8WW52 585 aa12.47□□□□□ -0.41
UBE2D3-227ENST00000508818 OTUD5Q96G74 571 aa12.47□□□□□ -0.41
UBE2D3-227ENST00000508818 WRNIP1Q96S55 665 aa12.47□□□□□ -0.41
UBE2D3-227ENST00000508818 ZNF341Q9BYN7 854 aa12.47□□□□□ -0.41
UBE2D3-227ENST00000508818 R3HDMLQ9H3Y0 253 aa12.47□□□□□ -0.41
UBE2D3-227ENST00000508818 ABCF2Q9UG63 623 aa12.47□□□□□ -0.41
UBE2D3-227ENST00000508818 DAGLAQ9Y4D2 1042 aa12.47□□□□□ -0.41
UBE2D3-227ENST00000508818 ARAP2Q8WZ64 1704 aa12.46□□□□□ -0.41
UBE2D3-227ENST00000508818 SALL1Q9NSC2 1324 aa12.46□□□□□ -0.41
UBE2D3-227ENST00000508818 CCL15-CCL14A0A0B4J2E2 113 aa12.46□□□□□ -0.41
UBE2D3-227ENST00000508818 A0A1B0GUL7 405 aa12.46□□□□□ -0.41
UBE2D3-227ENST00000508818 GJA5P36382 358 aa12.46□□□□□ -0.41
UBE2D3-227ENST00000508818 SOX10P56693 466 aa12.46□□□□□ -0.41
UBE2D3-227ENST00000508818 OS9Q13438 667 aaPredicted RBP12.46□□□□□ -0.41
UBE2D3-227ENST00000508818 CCL15Q16663 113 aa12.46□□□□□ -0.41
UBE2D3-227ENST00000508818 CDC42EP5Q6NZY7 148 aa12.46□□□□□ -0.41
UBE2D3-227ENST00000508818 FBXO46Q6PJ61 603 aaPredicted RBP12.46□□□□□ -0.41
UBE2D3-227ENST00000508818 MIGA2Q7L4E1 593 aa12.46□□□□□ -0.41
UBE2D3-227ENST00000508818 XAGE2Q96GT9 111 aa12.46□□□□□ -0.41
UBE2D3-227ENST00000508818 ERO1AQ96HE7 468 aa12.46□□□□□ -0.41
UBE2D3-227ENST00000508818 HPS5Q9UPZ3 1129 aa12.46□□□□□ -0.41
UBE2D3-227ENST00000508818 CRHR2Q13324 411 aa12.45□□□□□ -0.42
UBE2D3-227ENST00000508818 ARHGEF6Q15052 776 aa12.45□□□□□ -0.42
UBE2D3-227ENST00000508818 ERICH6Q7L0X2 663 aa12.45□□□□□ -0.42
UBE2D3-227ENST00000508818 ERO1BQ86YB8 467 aa12.45□□□□□ -0.42
UBE2D3-227ENST00000508818 TMEM57Q8N5G2 664 aa12.45□□□□□ -0.42
UBE2D3-227ENST00000508818 SPDYE1Q8NFV5 336 aaPredicted RBP12.45□□□□□ -0.42
UBE2D3-227ENST00000508818 ZKSCAN4Q969J2 545 aaPredicted RBP12.45□□□□□ -0.42
UBE2D3-227ENST00000508818 ZFYVE28Q9HCC9 887 aa12.45□□□□□ -0.42
UBE2D3-227ENST00000508818 TNNQ9UQP3 1299 aa12.45□□□□□ -0.42
UBE2D3-227ENST00000508818 TRIM17Q9Y577 477 aa12.45□□□□□ -0.42
UBE2D3-227ENST00000508818 TESPA1A2RU30 521 aaPredicted RBP12.44□□□□□ -0.42
UBE2D3-227ENST00000508818 SPDYE5A6NIY4 337 aa12.44□□□□□ -0.42
UBE2D3-227ENST00000508818 CETPP11597 493 aa12.44□□□□□ -0.42
UBE2D3-227ENST00000508818 RASGRF1Q13972 1273 aa12.44□□□□□ -0.42
UBE2D3-227ENST00000508818 TAF1CQ15572 869 aaPredicted RBP12.44□□□□□ -0.42
UBE2D3-227ENST00000508818 ZSCAN29Q8IWY8 852 aaPredicted RBP12.44□□□□□ -0.42
UBE2D3-227ENST00000508818 PIP4P2Q8N4L2 257 aa12.44□□□□□ -0.42
UBE2D3-227ENST00000508818 MS4A4AQ96JQ5 239 aa12.44□□□□□ -0.42
UBE2D3-227ENST00000508818 PTPN18Q99952 460 aa12.44□□□□□ -0.42
UBE2D3-227ENST00000508818 MYH13Q9UKX3 1938 aa12.44□□□□□ -0.42
UBE2D3-227ENST00000508818 PNMA6EA0A0J9YXQ4 647 aa12.43□□□□□ -0.42
UBE2D3-227ENST00000508818 LDHCP07864 332 aa12.43□□□□□ -0.42
UBE2D3-227ENST00000508818 FXR2P51116 673 aaKnown RBP eCLIP12.43□□□□□ -0.42
UBE2D3-227ENST00000508818 GSTO1P78417 241 aa12.43□□□□□ -0.42
UBE2D3-227ENST00000508818 SP3Q02447 781 aa12.43□□□□□ -0.42
UBE2D3-227ENST00000508818 NFIAQ12857 509 aa12.43□□□□□ -0.42
UBE2D3-227ENST00000508818 SNAPC2Q13487 334 aa12.43□□□□□ -0.42
UBE2D3-227ENST00000508818 ITPRIPQ8IWB1 547 aa12.43□□□□□ -0.42
UBE2D3-227ENST00000508818 BRI3BPQ8WY22 251 aa12.43□□□□□ -0.42
UBE2D3-227ENST00000508818 SNCAIPQ9Y6H5 919 aa12.43□□□□□ -0.42
UBE2D3-227ENST00000508818 RPAP1Q9BWH6 1393 aaPredicted RBP12.43□□□□□ -0.42
UBE2D3-227ENST00000508818 PDS5AQ29RF7 1337 aaKnown RBP12.42□□□□□ -0.42
UBE2D3-227ENST00000508818 SURF6O75683 361 aaKnown RBP12.42□□□□□ -0.42
UBE2D3-227ENST00000508818 UQCRFS1P1P0C7P4 283 aa12.42□□□□□ -0.42
UBE2D3-227ENST00000508818 RGS3P49796 1198 aa12.42□□□□□ -0.42
UBE2D3-227ENST00000508818 ATP8B2P98198 1209 aa12.42□□□□□ -0.42
UBE2D3-227ENST00000508818 PPATQ06203 517 aa12.42□□□□□ -0.42
UBE2D3-227ENST00000508818 PPIL2Q13356 520 aa12.42□□□□□ -0.42
UBE2D3-227ENST00000508818 SPATA5Q8NB90 893 aa12.42□□□□□ -0.42
UBE2D3-227ENST00000508818 CD99L2Q8TCZ2 262 aa12.42□□□□□ -0.42
UBE2D3-227ENST00000508818 EFCC1Q9HA90 598 aa12.42□□□□□ -0.42
UBE2D3-227ENST00000508818 RAI14Q9P0K7 980 aa12.42□□□□□ -0.42
UBE2D3-227ENST00000508818 AK9Q5TCS8 1911 aa12.42□□□□□ -0.42
UBE2D3-227ENST00000508818 IRF6O14896 467 aa12.41□□□□□ -0.42
UBE2D3-227ENST00000508818 ENTPD3O75355 529 aa12.41□□□□□ -0.42
UBE2D3-227ENST00000508818 INPP5BP32019 993 aa12.41□□□□□ -0.42
UBE2D3-227ENST00000508818 BTDP43251 543 aa12.41□□□□□ -0.42
UBE2D3-227ENST00000508818 KIF22Q14807 665 aa12.41□□□□□ -0.42
UBE2D3-227ENST00000508818 CCDC158Q5M9N0 1113 aa12.41□□□□□ -0.42
UBE2D3-227ENST00000508818 OTOP1Q7RTM1 612 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms