RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 SPRED3Q2MJR0 410 aa6.78□□□□□ -1.32
GYPB-209ENST00000508618 ZNF574Q6ZN55 896 aaPredicted RBP6.78□□□□□ -1.32
GYPB-209ENST00000508618 CCDC87Q9NVE4 849 aa6.78□□□□□ -1.32
GYPB-209ENST00000508618 EGFL7Q9UHF1 273 aa6.78□□□□□ -1.32
GYPB-209ENST00000508618 DAGLAQ9Y4D2 1042 aa6.78□□□□□ -1.32
GYPB-209ENST00000508618 PPP1R15AO75807 674 aaPredicted RBP6.77□□□□□ -1.33
GYPB-209ENST00000508618 ECEL1O95672 775 aa6.77□□□□□ -1.33
GYPB-209ENST00000508618 NEFLP07196 543 aa6.77□□□□□ -1.33
GYPB-209ENST00000508618 RPS26P11Q5JNZ5 115 aaPredicted RBP6.77□□□□□ -1.33
GYPB-209ENST00000508618 PRPF40BQ6NWY9 871 aaKnown RBP6.77□□□□□ -1.33
GYPB-209ENST00000508618 SPRED2Q7Z698 418 aa6.77□□□□□ -1.33
GYPB-209ENST00000508618 NETO1Q8TDF5 533 aa6.77□□□□□ -1.33
GYPB-209ENST00000508618 TMPRSS2O15393 492 aa6.76□□□□□ -1.33
GYPB-209ENST00000508618 PHLDB3Q6NSJ2 640 aa6.76□□□□□ -1.33
GYPB-209ENST00000508618 GLIS3Q8NEA6 775 aa6.76□□□□□ -1.33
GYPB-209ENST00000508618 ATXN3LQ9H3M9 355 aa6.76□□□□□ -1.33
GYPB-209ENST00000508618 CRIM1Q9NZV1 1036 aa6.76□□□□□ -1.33
GYPB-209ENST00000508618 DBX1A6NMT0 343 aa6.75□□□□□ -1.33
GYPB-209ENST00000508618 PRKCQQ04759 706 aa6.75□□□□□ -1.33
GYPB-209ENST00000508618 PDE3AQ14432 1141 aa6.75□□□□□ -1.33
GYPB-209ENST00000508618 TMEM40Q8WWA1 233 aa6.75□□□□□ -1.33
GYPB-209ENST00000508618 VAV3Q9UKW4 847 aa6.75□□□□□ -1.33
GYPB-209ENST00000508618 PPP1R9AQ9ULJ8 1098 aa6.75□□□□□ -1.33
GYPB-209ENST00000508618 FARP2O94887 1054 aaPredicted RBP6.74□□□□□ -1.33
GYPB-209ENST00000508618 IFI16Q16666 785 aaKnown RBP6.74□□□□□ -1.33
GYPB-209ENST00000508618 ZNF648Q5T619 568 aaPredicted RBP6.74□□□□□ -1.33
GYPB-209ENST00000508618 ABCB6Q9NP58 842 aa6.74□□□□□ -1.33
GYPB-209ENST00000508618 KRT82Q9NSB4 513 aa6.74□□□□□ -1.33
GYPB-209ENST00000508618 FAM87AP0C7U9 286 aa6.73□□□□□ -1.33
GYPB-209ENST00000508618 ID3Q02535 119 aa6.73□□□□□ -1.33
GYPB-209ENST00000508618 ZNF211Q13398 564 aaPredicted RBP6.73□□□□□ -1.33
GYPB-209ENST00000508618 KIF4BQ2VIQ3 1234 aa6.73□□□□□ -1.33
GYPB-209ENST00000508618 SPOCD1Q6ZMY3 1216 aa6.73□□□□□ -1.33
GYPB-209ENST00000508618 PLD6Q8N2A8 252 aaKnown RBP6.73□□□□□ -1.33
GYPB-209ENST00000508618 BHLHE22Q8NFJ8 381 aaPredicted RBP6.73□□□□□ -1.33
GYPB-209ENST00000508618 FAM168AQ92567 244 aa6.73□□□□□ -1.33
GYPB-209ENST00000508618 EHD4Q9H223 541 aa6.73□□□□□ -1.33
GYPB-209ENST00000508618 PIDD1Q9HB75 910 aa6.73□□□□□ -1.33
GYPB-209ENST00000508618 RC3H2Q9HBD1 1191 aaKnown RBP6.73□□□□□ -1.33
GYPB-209ENST00000508618 MBNL3Q9NUK0 354 aaKnown RBP6.73□□□□□ -1.33
GYPB-209ENST00000508618 PCDHGC5Q9Y5F6 944 aa6.73□□□□□ -1.33
GYPB-209ENST00000508618 RNASE1P07998 156 aaKnown RBP6.72□□□□□ -1.33
GYPB-209ENST00000508618 CD8BP10966 210 aa6.72□□□□□ -1.33
GYPB-209ENST00000508618 CDK5R2Q13319 367 aa6.72□□□□□ -1.33
GYPB-209ENST00000508618 PDE3BQ13370 1112 aa6.72□□□□□ -1.33
GYPB-209ENST00000508618 LCE4AQ5TA78 99 aa6.72□□□□□ -1.33
GYPB-209ENST00000508618 FANCD2OSQ96PS1 177 aa6.72□□□□□ -1.33
GYPB-209ENST00000508618 FAM129BQ96TA1 746 aa6.72□□□□□ -1.33
GYPB-209ENST00000508618 NPHS2Q9NP85 383 aa6.72□□□□□ -1.33
GYPB-209ENST00000508618 ADAMTS6Q9UKP5 1117 aa6.72□□□□□ -1.33
GYPB-209ENST00000508618 ICMTO60725 284 aa6.71□□□□□ -1.34
GYPB-209ENST00000508618 CPNE3O75131 537 aaKnown RBP6.71□□□□□ -1.34
GYPB-209ENST00000508618 ABL1P00519 1130 aa6.71□□□□□ -1.34
GYPB-209ENST00000508618 CEACAM5P06731 702 aa6.71□□□□□ -1.34
GYPB-209ENST00000508618 SLFN14P0C7P3 912 aa6.71□□□□□ -1.34
GYPB-209ENST00000508618 PKN1Q16512 942 aa6.71□□□□□ -1.34
GYPB-209ENST00000508618 KRTAP19-4Q3LI73 84 aa6.71□□□□□ -1.34
GYPB-209ENST00000508618 USPL1Q5W0Q7 1092 aa6.71□□□□□ -1.34
GYPB-209ENST00000508618 SMYD4Q8IYR2 804 aaPredicted RBP6.71□□□□□ -1.34
GYPB-209ENST00000508618 FLAD1Q8NFF5 587 aa6.71□□□□□ -1.34
GYPB-209ENST00000508618 DNAJC25Q9H1X3 360 aa6.71□□□□□ -1.34
GYPB-209ENST00000508618 CCDC86Q9H6F5 360 aaKnown RBP6.71□□□□□ -1.34
GYPB-209ENST00000508618 BRPF3Q9ULD4 1205 aa6.71□□□□□ -1.34
GYPB-209ENST00000508618 TRAK1Q9UPV9 953 aa6.71□□□□□ -1.34
GYPB-209ENST00000508618 BNIP3Q12983 259 aa6.7□□□□□ -1.34
GYPB-209ENST00000508618 FBLN7Q53RD9 439 aa6.7□□□□□ -1.34
GYPB-209ENST00000508618 FAM181AQ8N9Y4 354 aa6.7□□□□□ -1.34
GYPB-209ENST00000508618 LRRN4CLQ8ND94 238 aa6.7□□□□□ -1.34
GYPB-209ENST00000508618 HRASLS5Q96KN8 279 aa6.7□□□□□ -1.34
GYPB-209ENST00000508618 CITED4Q96RK1 184 aa6.7□□□□□ -1.34
GYPB-209ENST00000508618 TMEM265A0A087WTH1 108 aa6.69□□□□□ -1.34
GYPB-209ENST00000508618 NDUFB5O43674 189 aa6.69□□□□□ -1.34
GYPB-209ENST00000508618 ZNF862O60290 1169 aa6.69□□□□□ -1.34
GYPB-209ENST00000508618 GSTP1P09211 210 aaKnown RBP6.69□□□□□ -1.34
GYPB-209ENST00000508618 OXCT1P55809 520 aa6.69□□□□□ -1.34
GYPB-209ENST00000508618 ANGEL2Q5VTE6 544 aaKnown RBP6.69□□□□□ -1.34
GYPB-209ENST00000508618 B4GALNT3Q6L9W6 998 aa6.69□□□□□ -1.34
GYPB-209ENST00000508618 TNKS2Q9H2K2 1166 aa6.69□□□□□ -1.34
GYPB-209ENST00000508618 DISC1Q9NRI5 854 aa6.69□□□□□ -1.34
GYPB-209ENST00000508618 U3KQE9 123 aa6.69□□□□□ -1.34
GYPB-209ENST00000508618 TMEM238LA0A1B0GVL6 79 aa6.68□□□□□ -1.34
GYPB-209ENST00000508618 SLC23A3Q6PIS1 610 aa6.68□□□□□ -1.34
GYPB-209ENST00000508618 PI4K2BQ8TCG2 481 aa6.68□□□□□ -1.34
GYPB-209ENST00000508618 WDR89Q96FK6 387 aaPredicted RBP6.68□□□□□ -1.34
GYPB-209ENST00000508618 DUSP23Q9BVJ7 150 aa6.68□□□□□ -1.34
GYPB-209ENST00000508618 LGR6Q9HBX8 967 aa6.68□□□□□ -1.34
GYPB-209ENST00000508618 ANO2Q9NQ90 1003 aa6.68□□□□□ -1.34
GYPB-209ENST00000508618 H3BRB1 525 aa6.67□□□□□ -1.34
GYPB-209ENST00000508618 LIG1P18858 919 aa6.67□□□□□ -1.34
GYPB-209ENST00000508618 ARHGAP4P98171 946 aa6.67□□□□□ -1.34
GYPB-209ENST00000508618 FAAP100Q0VG06 881 aa6.67□□□□□ -1.34
GYPB-209ENST00000508618 ORC1Q13415 861 aa6.67□□□□□ -1.34
GYPB-209ENST00000508618 ZNF124Q15973 351 aa6.67□□□□□ -1.34
GYPB-209ENST00000508618 ECM1Q16610 540 aa6.67□□□□□ -1.34
GYPB-209ENST00000508618 PDZD3Q86UT5 571 aa6.67□□□□□ -1.34
GYPB-209ENST00000508618 KSR1Q8IVT5 923 aa6.67□□□□□ -1.34
GYPB-209ENST00000508618 TUT1Q9H6E5 874 aaKnown RBP6.67□□□□□ -1.34
GYPB-209ENST00000508618 PCOLCE2Q9UKZ9 415 aa6.67□□□□□ -1.34
GYPB-209ENST00000508618 SNX11Q9Y5W9 270 aa6.67□□□□□ -1.34
GYPB-209ENST00000508618 IGHA2P01877 340 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 1224.7 ms