RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 VEZTQ9HBM0 779 aa11.09□□□□□ -0.63
NUP54-207ENST00000508583 CREBZFQ9NS37 354 aa11.09□□□□□ -0.63
NUP54-207ENST00000508583 PAG1Q9NWQ8 432 aa11.09□□□□□ -0.63
NUP54-207ENST00000508583 DAGLAQ9Y4D2 1042 aa11.09□□□□□ -0.63
NUP54-207ENST00000508583 AOX1Q06278 1338 aa11.09□□□□□ -0.63
NUP54-207ENST00000508583 CLRN2A0PK11 232 aa11.08□□□□□ -0.64
NUP54-207ENST00000508583 TMEM88BA6NKF7 163 aa11.08□□□□□ -0.64
NUP54-207ENST00000508583 GOLIM4O00461 696 aa11.08□□□□□ -0.64
NUP54-207ENST00000508583 IGHDP01880 384 aa11.08□□□□□ -0.64
NUP54-207ENST00000508583 FKBP1BP68106 108 aa11.08□□□□□ -0.64
NUP54-207ENST00000508583 DIXDC1Q155Q3 683 aa11.08□□□□□ -0.64
NUP54-207ENST00000508583 GRIK5Q16478 980 aa11.08□□□□□ -0.64
NUP54-207ENST00000508583 SUPT20HL1Q3ZLR7 823 aa11.08□□□□□ -0.64
NUP54-207ENST00000508583 B4GALNT3Q6L9W6 998 aa11.08□□□□□ -0.64
NUP54-207ENST00000508583 APOBEC3HQ6NTF7 200 aaKnown RBP11.08□□□□□ -0.64
NUP54-207ENST00000508583 TBC1D9Q6ZT07 1266 aa11.08□□□□□ -0.64
NUP54-207ENST00000508583 FAM83AQ86UY5 434 aa11.08□□□□□ -0.64
NUP54-207ENST00000508583 GLIS2Q9BZE0 524 aaPredicted RBP11.08□□□□□ -0.64
NUP54-207ENST00000508583 BOLA2Q9H3K6 86 aa11.08□□□□□ -0.64
NUP54-207ENST00000508583 ZNF70Q9UC06 446 aaPredicted RBP11.08□□□□□ -0.64
NUP54-207ENST00000508583 POLR2AP24928 1970 aaKnown RBP11.08□□□□□ -0.64
NUP54-207ENST00000508583 GPR75-ASB3A0A0A6YYF3 556 aa11.07□□□□□ -0.64
NUP54-207ENST00000508583 TRAF5O00463 557 aa11.07□□□□□ -0.64
NUP54-207ENST00000508583 CELF2O95319 508 aaKnown RBP11.07□□□□□ -0.64
NUP54-207ENST00000508583 HTRA3P83110 453 aa11.07□□□□□ -0.64
NUP54-207ENST00000508583 FMR1Q06787 632 aaKnown RBP eCLIP11.07□□□□□ -0.64
NUP54-207ENST00000508583 CENPQQ7L2Z9 268 aaPredicted RBP11.07□□□□□ -0.64
NUP54-207ENST00000508583 TICAM2Q86XR7 235 aa11.07□□□□□ -0.64
NUP54-207ENST00000508583 C2orf69Q8N8R5 385 aa11.07□□□□□ -0.64
NUP54-207ENST00000508583 LNPKQ9C0E8 428 aa11.07□□□□□ -0.64
NUP54-207ENST00000508583 DEFB129Q9H1M3 183 aa11.07□□□□□ -0.64
NUP54-207ENST00000508583 TDRD3Q9H7E2 651 aaKnown RBP11.07□□□□□ -0.64
NUP54-207ENST00000508583 STAP2Q9UGK3 403 aa11.07□□□□□ -0.64
NUP54-207ENST00000508583 PCDHAC2Q9Y5I4 1007 aa11.07□□□□□ -0.64
NUP54-207ENST00000508583 DOCK2Q92608 1830 aa11.07□□□□□ -0.64
NUP54-207ENST00000508583 RPAP1Q9BWH6 1393 aaPredicted RBP11.06□□□□□ -0.64
NUP54-207ENST00000508583 ADM5C9JUS6 153 aa11.06□□□□□ -0.64
NUP54-207ENST00000508583 PPP1R12BO60237 982 aaPredicted RBP11.06□□□□□ -0.64
NUP54-207ENST00000508583 ZFYP08048 801 aaPredicted RBP11.06□□□□□ -0.64
NUP54-207ENST00000508583 CYP7A1P22680 504 aa11.06□□□□□ -0.64
NUP54-207ENST00000508583 BTDP43251 543 aa11.06□□□□□ -0.64
NUP54-207ENST00000508583 SLC9C2Q5TAH2 1124 aa11.06□□□□□ -0.64
NUP54-207ENST00000508583 CDC42EP5Q6NZY7 148 aa11.06□□□□□ -0.64
NUP54-207ENST00000508583 DLK2Q6UY11 383 aa11.06□□□□□ -0.64
NUP54-207ENST00000508583 MAGEB6Q8N7X4 407 aa11.06□□□□□ -0.64
NUP54-207ENST00000508583 CDCA5Q96FF9 252 aa11.06□□□□□ -0.64
NUP54-207ENST00000508583 CCDC136Q96JN2 1154 aa11.06□□□□□ -0.64
NUP54-207ENST00000508583 ZNF408Q9H9D4 720 aa11.06□□□□□ -0.64
NUP54-207ENST00000508583 PIH1D3Q9NQM4 214 aaKnown RBP11.06□□□□□ -0.64
NUP54-207ENST00000508583 USP40Q9NVE5 1235 aa11.06□□□□□ -0.64
NUP54-207ENST00000508583 SCAF8Q9UPN6 1271 aaKnown RBP11.06□□□□□ -0.64
NUP54-207ENST00000508583 TCP10L2B9ZVM9 353 aa11.05□□□□□ -0.64
NUP54-207ENST00000508583 ENTPD3O75355 529 aa11.05□□□□□ -0.64
NUP54-207ENST00000508583 PDE1AP54750 535 aa11.05□□□□□ -0.64
NUP54-207ENST00000508583 PPP4CP60510 307 aa11.05□□□□□ -0.64
NUP54-207ENST00000508583 RASA3Q14644 834 aa11.05□□□□□ -0.64
NUP54-207ENST00000508583 IDI2Q9BXS1 227 aa11.05□□□□□ -0.64
NUP54-207ENST00000508583 GBA2Q9HCG7 927 aaPredicted RBP11.05□□□□□ -0.64
NUP54-207ENST00000508583 ABT1Q9ULW3 272 aaKnown RBP11.05□□□□□ -0.64
NUP54-207ENST00000508583 CEP350Q5VT06 3117 aa11.04□□□□□ -0.64
NUP54-207ENST00000508583 MYH7P12883 1935 aa11.04□□□□□ -0.64
NUP54-207ENST00000508583 PAPPA2Q9BXP8 1791 aa11.04□□□□□ -0.64
NUP54-207ENST00000508583 PDE6AP16499 860 aa11.04□□□□□ -0.64
NUP54-207ENST00000508583 TTLL12Q14166 644 aaPredicted RBP11.04□□□□□ -0.64
NUP54-207ENST00000508583 UBE3CQ15386 1083 aa11.04□□□□□ -0.64
NUP54-207ENST00000508583 DCAF15Q66K64 600 aa11.04□□□□□ -0.64
NUP54-207ENST00000508583 ARMC9Q7Z3E5 817 aa11.04□□□□□ -0.64
NUP54-207ENST00000508583 TEX11Q8IYF3 940 aa11.04□□□□□ -0.64
NUP54-207ENST00000508583 KBTBD3Q8NAB2 608 aa11.04□□□□□ -0.64
NUP54-207ENST00000508583 PI4K2BQ8TCG2 481 aa11.04□□□□□ -0.64
NUP54-207ENST00000508583 FAM151AQ8WW52 585 aa11.04□□□□□ -0.64
NUP54-207ENST00000508583 EVI5LQ96CN4 794 aa11.04□□□□□ -0.64
NUP54-207ENST00000508583 HHIPL1Q96JK4 782 aa11.04□□□□□ -0.64
NUP54-207ENST00000508583 ANTXR1Q9H6X2 564 aa11.04□□□□□ -0.64
NUP54-207ENST00000508583 AATFQ9NY61 560 aaKnown RBP eCLIP11.04□□□□□ -0.64
NUP54-207ENST00000508583 NDUFB9Q9Y6M9 179 aa11.04□□□□□ -0.64
NUP54-207ENST00000508583 SALL3Q9BXA9 1300 aa11.04□□□□□ -0.64
NUP54-207ENST00000508583 MAGEB6P1A0A0J9YX57 407 aa11.03□□□□□ -0.64
NUP54-207ENST00000508583 UNCXA6NJT0 531 aa11.03□□□□□ -0.64
NUP54-207ENST00000508583 IREB2P48200 963 aaKnown RBP11.03□□□□□ -0.64
NUP54-207ENST00000508583 DDRGK1Q96HY6 314 aa11.03□□□□□ -0.64
NUP54-207ENST00000508583 FSD1Q9BTV5 496 aa11.03□□□□□ -0.64
NUP54-207ENST00000508583 OSBPL3Q9H4L5 887 aa11.03□□□□□ -0.64
NUP54-207ENST00000508583 TLL2Q9Y6L7 1015 aa11.03□□□□□ -0.64
NUP54-207ENST00000508583 ZNF532Q9HCE3 1301 aa11.03□□□□□ -0.64
NUP54-207ENST00000508583 RFX7Q2KHR2 1363 aa11.03□□□□□ -0.64
NUP54-207ENST00000508583 MYO5AQ9Y4I1 1855 aaKnown RBP11.02□□□□□ -0.64
NUP54-207ENST00000508583 COL2A1P02458 1487 aaPredicted RBP11.02□□□□□ -0.65
NUP54-207ENST00000508583 ADD2P35612 726 aa11.02□□□□□ -0.65
NUP54-207ENST00000508583 ECE1P42892 770 aa11.02□□□□□ -0.65
NUP54-207ENST00000508583 RHBDL3P58872 404 aa11.02□□□□□ -0.65
NUP54-207ENST00000508583 CST9Q5W186 159 aa11.02□□□□□ -0.65
NUP54-207ENST00000508583 TSHZ3Q63HK5 1081 aa11.02□□□□□ -0.65
NUP54-207ENST00000508583 PLEKHM2Q8IWE5 1019 aa11.02□□□□□ -0.65
NUP54-207ENST00000508583 ZSCAN29Q8IWY8 852 aaPredicted RBP11.02□□□□□ -0.65
NUP54-207ENST00000508583 OTUD7AQ8TE49 926 aaPredicted RBP11.02□□□□□ -0.65
NUP54-207ENST00000508583 ZNF384Q8TF68 577 aa11.02□□□□□ -0.65
NUP54-207ENST00000508583 CRNKL1Q9BZJ0 848 aaKnown RBP11.02□□□□□ -0.65
NUP54-207ENST00000508583 DHX36Q9H2U1 1008 aaKnown RBP11.02□□□□□ -0.65
NUP54-207ENST00000508583 AK9Q5TCS8 1911 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms