RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 KLHDC7BQ96G42 594 aa10.28□□□□□ -0.76
COL6A4P1-204ENST00000508169 LRRC3Q9BY71 257 aa10.28□□□□□ -0.76
COL6A4P1-204ENST00000508169 ZC3H12CQ9C0D7 883 aaKnown RBP10.28□□□□□ -0.76
COL6A4P1-204ENST00000508169 RRAGCQ9HB90 399 aa10.28□□□□□ -0.76
COL6A4P1-204ENST00000508169 GINM1Q9NU53 330 aa10.28□□□□□ -0.76
COL6A4P1-204ENST00000508169 FAM221AA4D161 298 aa10.27□□□□□ -0.77
COL6A4P1-204ENST00000508169 TLR3O15455 904 aaKnown RBP10.27□□□□□ -0.77
COL6A4P1-204ENST00000508169 BPNT1O95861 308 aa10.27□□□□□ -0.77
COL6A4P1-204ENST00000508169 MAOBP27338 520 aa10.27□□□□□ -0.77
COL6A4P1-204ENST00000508169 SOX9P48436 509 aa10.27□□□□□ -0.77
COL6A4P1-204ENST00000508169 MPP2Q14168 576 aa10.27□□□□□ -0.77
COL6A4P1-204ENST00000508169 SUZ12Q15022 739 aaKnown RBP10.27□□□□□ -0.77
COL6A4P1-204ENST00000508169 MPRIPQ6WCQ1 1025 aa10.27□□□□□ -0.77
COL6A4P1-204ENST00000508169 ILDR2Q71H61 639 aa10.27□□□□□ -0.77
COL6A4P1-204ENST00000508169 NEDD1Q8NHV4 660 aa10.27□□□□□ -0.77
COL6A4P1-204ENST00000508169 FBXO27Q8NI29 283 aa10.27□□□□□ -0.77
COL6A4P1-204ENST00000508169 ENAMQ9NRM1 1142 aa10.27□□□□□ -0.77
COL6A4P1-204ENST00000508169 CILPO75339 1184 aa10.26□□□□□ -0.77
COL6A4P1-204ENST00000508169 ECEL1O95672 775 aa10.26□□□□□ -0.77
COL6A4P1-204ENST00000508169 SEZ6Q53EL9 994 aa10.26□□□□□ -0.77
COL6A4P1-204ENST00000508169 ZNF385CQ66K41 422 aaPredicted RBP10.26□□□□□ -0.77
COL6A4P1-204ENST00000508169 SLITRK4Q8IW52 837 aa10.26□□□□□ -0.77
COL6A4P1-204ENST00000508169 GALNT11Q8NCW6 608 aa10.26□□□□□ -0.77
COL6A4P1-204ENST00000508169 ZNF775Q96BV0 537 aaPredicted RBP10.26□□□□□ -0.77
COL6A4P1-204ENST00000508169 USP26Q9BXU7 913 aa10.26□□□□□ -0.77
COL6A4P1-204ENST00000508169 TM4SF5O14894 197 aa10.25□□□□□ -0.77
COL6A4P1-204ENST00000508169 SSBP05455 408 aaKnown RBP eCLIP10.25□□□□□ -0.77
COL6A4P1-204ENST00000508169 HOXB4P17483 251 aaPredicted RBP10.25□□□□□ -0.77
COL6A4P1-204ENST00000508169 NLRP12P59046 1061 aa10.25□□□□□ -0.77
COL6A4P1-204ENST00000508169 PTPN11Q06124 597 aaPredicted RBP10.25□□□□□ -0.77
COL6A4P1-204ENST00000508169 CWF19L2Q2TBE0 894 aaKnown RBP10.25□□□□□ -0.77
COL6A4P1-204ENST00000508169 TRAPPC3LQ5T215 181 aa10.25□□□□□ -0.77
COL6A4P1-204ENST00000508169 SVOPQ8N4V2 548 aa10.25□□□□□ -0.77
COL6A4P1-204ENST00000508169 DTWD1Q8N5C7 304 aa10.25□□□□□ -0.77
COL6A4P1-204ENST00000508169 DCAF11Q8TEB1 546 aa10.25□□□□□ -0.77
COL6A4P1-204ENST00000508169 ACSBG1Q96GR2 724 aa10.25□□□□□ -0.77
COL6A4P1-204ENST00000508169 DNAJC2Q99543 621 aaKnown RBP10.25□□□□□ -0.77
COL6A4P1-204ENST00000508169 KRT82Q9NSB4 513 aa10.25□□□□□ -0.77
COL6A4P1-204ENST00000508169 CACNA2D2Q9NY47 1150 aa10.25□□□□□ -0.77
COL6A4P1-204ENST00000508169 STRIP2Q9ULQ0 834 aa10.25□□□□□ -0.77
COL6A4P1-204ENST00000508169 HNRNPUQ00839 825 aaKnown RBP eCLIP10.24□□□□□ -0.77
COL6A4P1-204ENST00000508169 TREML4Q6UXN2 200 aa10.24□□□□□ -0.77
COL6A4P1-204ENST00000508169 GPBAR1Q8TDU6 330 aa10.24□□□□□ -0.77
COL6A4P1-204ENST00000508169 CCDC86Q9H6F5 360 aaKnown RBP10.24□□□□□ -0.77
COL6A4P1-204ENST00000508169 DEAF1O75398 565 aaPredicted RBP10.23□□□□□ -0.77
COL6A4P1-204ENST00000508169 STK10O94804 968 aaKnown RBP10.23□□□□□ -0.77
COL6A4P1-204ENST00000508169 CTSBP07858 339 aa10.23□□□□□ -0.77
COL6A4P1-204ENST00000508169 CD68P34810 354 aaPredicted RBP10.23□□□□□ -0.77
COL6A4P1-204ENST00000508169 RPL6Q02878 288 aaKnown RBP10.23□□□□□ -0.77
COL6A4P1-204ENST00000508169 PDE3AQ14432 1141 aa10.23□□□□□ -0.77
COL6A4P1-204ENST00000508169 REC114Q7Z4M0 266 aa10.23□□□□□ -0.77
COL6A4P1-204ENST00000508169 PCDHA4Q9UN74 947 aa10.23□□□□□ -0.77
COL6A4P1-204ENST00000508169 LOC105371045A0A1W2PR82 267 aa10.22□□□□□ -0.77
COL6A4P1-204ENST00000508169 ADAM11O75078 769 aa10.22□□□□□ -0.77
COL6A4P1-204ENST00000508169 FOXD4L6Q3SYB3 417 aaPredicted RBP10.22□□□□□ -0.77
COL6A4P1-204ENST00000508169 HP1BP3Q5SSJ5 553 aaPredicted RBP10.22□□□□□ -0.77
COL6A4P1-204ENST00000508169 FOXD4L3Q6VB84 417 aaPredicted RBP10.22□□□□□ -0.77
COL6A4P1-204ENST00000508169 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.22□□□□□ -0.77
COL6A4P1-204ENST00000508169 HIRIP3Q9BW71 556 aaPredicted RBP10.22□□□□□ -0.77
COL6A4P1-204ENST00000508169 LOC100289279A0A1B0GTE1 492 aa10.21□□□□□ -0.77
COL6A4P1-204ENST00000508169 DDX3YO15523 660 aaKnown RBP10.21□□□□□ -0.77
COL6A4P1-204ENST00000508169 MCM4P33991 863 aa10.21□□□□□ -0.77
COL6A4P1-204ENST00000508169 ZNF165P49910 485 aa10.21□□□□□ -0.77
COL6A4P1-204ENST00000508169 CPLX3Q8WVH0 158 aa10.21□□□□□ -0.77
COL6A4P1-204ENST00000508169 BRMS1Q9HCU9 246 aa10.21□□□□□ -0.77
COL6A4P1-204ENST00000508169 A0A0A0MRY4 1105 aa10.2□□□□□ -0.78
COL6A4P1-204ENST00000508169 ZNF862O60290 1169 aa10.2□□□□□ -0.78
COL6A4P1-204ENST00000508169 RAC1P63000 192 aa10.2□□□□□ -0.78
COL6A4P1-204ENST00000508169 FBXO11Q86XK2 927 aa10.2□□□□□ -0.78
COL6A4P1-204ENST00000508169 FMR1NBQ8N0W7 255 aaPredicted RBP10.2□□□□□ -0.78
COL6A4P1-204ENST00000508169 TRIM11Q96F44 468 aa10.2□□□□□ -0.78
COL6A4P1-204ENST00000508169 KCNK4Q9NYG8 393 aa10.2□□□□□ -0.78
COL6A4P1-204ENST00000508169 LIG1P18858 919 aa10.19□□□□□ -0.78
COL6A4P1-204ENST00000508169 RBL2Q08999 1139 aa10.19□□□□□ -0.78
COL6A4P1-204ENST00000508169 REXO1Q8N1G1 1221 aaKnown RBP10.19□□□□□ -0.78
COL6A4P1-204ENST00000508169 SRRTQ9BXP5 876 aaKnown RBP10.19□□□□□ -0.78
COL6A4P1-204ENST00000508169 PPT2Q9UMR5 302 aa10.19□□□□□ -0.78
COL6A4P1-204ENST00000508169 SHROOM4Q9ULL8 1493 aa10.18□□□□□ -0.78
COL6A4P1-204ENST00000508169 SELPP16109 830 aa10.18□□□□□ -0.78
COL6A4P1-204ENST00000508169 SNRPNP63162 240 aaKnown RBP10.18□□□□□ -0.78
COL6A4P1-204ENST00000508169 KIF4BQ2VIQ3 1234 aa10.18□□□□□ -0.78
COL6A4P1-204ENST00000508169 WIPI1Q5MNZ9 446 aaPredicted RBP10.18□□□□□ -0.78
COL6A4P1-204ENST00000508169 LCE2AQ5TA79 106 aaPredicted RBP10.18□□□□□ -0.78
COL6A4P1-204ENST00000508169 LINC00114Q6XXX2 140 aa10.18□□□□□ -0.78
COL6A4P1-204ENST00000508169 CCDC81Q6ZN84 652 aa10.18□□□□□ -0.78
COL6A4P1-204ENST00000508169 GK5Q6ZS86 529 aa10.18□□□□□ -0.78
COL6A4P1-204ENST00000508169 UBASH3BQ8TF42 649 aa10.18□□□□□ -0.78
COL6A4P1-204ENST00000508169 FERD3LQ96RJ6 166 aa10.18□□□□□ -0.78
COL6A4P1-204ENST00000508169 ZNF408Q9H9D4 720 aa10.18□□□□□ -0.78
COL6A4P1-204ENST00000508169 MRVI1Q9Y6F6 885 aa10.18□□□□□ -0.78
COL6A4P1-204ENST00000508169 SPDYE3A6NKU9 549 aa10.17□□□□□ -0.78
COL6A4P1-204ENST00000508169 PIK3R2O00459 728 aa10.17□□□□□ -0.78
COL6A4P1-204ENST00000508169 DLL1O00548 723 aa10.17□□□□□ -0.78
COL6A4P1-204ENST00000508169 GNB5O14775 395 aa10.17□□□□□ -0.78
COL6A4P1-204ENST00000508169 ARHGEF15O94989 841 aa10.17□□□□□ -0.78
COL6A4P1-204ENST00000508169 CDK8P49336 464 aa10.17□□□□□ -0.78
COL6A4P1-204ENST00000508169 SOGA3Q5TF21 947 aa10.17□□□□□ -0.78
COL6A4P1-204ENST00000508169 LRFN4Q6PJG9 635 aa10.17□□□□□ -0.78
COL6A4P1-204ENST00000508169 DPH6Q7L8W6 267 aa10.17□□□□□ -0.78
COL6A4P1-204ENST00000508169 PMFBP1Q8TBY8 1022 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms