RNA–Protein interactions for RNA: ENST00000507905.6

SMN1-206, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 431 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-206ENST00000507905 ACSS3Q9H6R3 686 aa9.9□□□□□ -0.82
SMN1-206ENST00000507905 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.89□□□□□ -0.83
SMN1-206ENST00000507905 FCGRTP55899 365 aa9.89□□□□□ -0.83
SMN1-206ENST00000507905 PLCB3Q01970 1234 aa9.89□□□□□ -0.83
SMN1-206ENST00000507905 DUSP27Q5VZP5 1158 aa9.89□□□□□ -0.83
SMN1-206ENST00000507905 ZC3H12CQ9C0D7 883 aaKnown RBP9.89□□□□□ -0.83
SMN1-206ENST00000507905 GSX1Q9H4S2 264 aaPredicted RBP9.89□□□□□ -0.83
SMN1-206ENST00000507905 TIMELESSQ9UNS1 1208 aa9.89□□□□□ -0.83
SMN1-206ENST00000507905 FAM170BA6NMN3 283 aa9.88□□□□□ -0.83
SMN1-206ENST00000507905 LIG1P18858 919 aa9.88□□□□□ -0.83
SMN1-206ENST00000507905 MSMPQ1L6U9 139 aa9.88□□□□□ -0.83
SMN1-206ENST00000507905 GATA6Q92908 595 aa9.88□□□□□ -0.83
SMN1-206ENST00000507905 PPP1R9AQ9ULJ8 1098 aa9.88□□□□□ -0.83
SMN1-206ENST00000507905 SLFN14P0C7P3 912 aa9.87□□□□□ -0.83
SMN1-206ENST00000507905 CYP27A1Q02318 531 aa9.87□□□□□ -0.83
SMN1-206ENST00000507905 PPP2R3AQ06190 1150 aa9.87□□□□□ -0.83
SMN1-206ENST00000507905 PI16Q6UXB8 463 aa9.87□□□□□ -0.83
SMN1-206ENST00000507905 BCO2Q9BYV7 579 aa9.87□□□□□ -0.83
SMN1-206ENST00000507905 CCDC86Q9H6F5 360 aaKnown RBP9.87□□□□□ -0.83
SMN1-206ENST00000507905 TMEM39AQ9NV64 488 aa9.87□□□□□ -0.83
SMN1-206ENST00000507905 ANGEL1Q9UNK9 670 aaKnown RBP9.87□□□□□ -0.83
SMN1-206ENST00000507905 DAGLAQ9Y4D2 1042 aa9.87□□□□□ -0.83
SMN1-206ENST00000507905 XRCC5P13010 732 aaKnown RBP9.86□□□□□ -0.83
SMN1-206ENST00000507905 TAL1P17542 331 aaPredicted RBP9.86□□□□□ -0.83
SMN1-206ENST00000507905 MAPK1P28482 360 aa9.86□□□□□ -0.83
SMN1-206ENST00000507905 WDR89Q96FK6 387 aaPredicted RBP9.86□□□□□ -0.83
SMN1-206ENST00000507905 GPN3Q9UHW5 284 aaPredicted RBP9.86□□□□□ -0.83
SMN1-206ENST00000507905 KRTAP9-6A0A140TA67 174 aa9.85□□□□□ -0.83
SMN1-206ENST00000507905 PAX4O43316 350 aa9.85□□□□□ -0.83
SMN1-206ENST00000507905 HNRNPUQ00839 825 aaKnown RBP eCLIP9.85□□□□□ -0.83
SMN1-206ENST00000507905 DSC3Q14574 896 aa9.85□□□□□ -0.83
SMN1-206ENST00000507905 LGR6Q9HBX8 967 aa9.85□□□□□ -0.83
SMN1-206ENST00000507905 PNMA6FA0A0J9YX94 578 aa9.84□□□□□ -0.83
SMN1-206ENST00000507905 DYNC1LI2O43237 492 aaPredicted RBP9.84□□□□□ -0.83
SMN1-206ENST00000507905 TREHO43280 583 aa9.84□□□□□ -0.83
SMN1-206ENST00000507905 GSTP1P09211 210 aaKnown RBP9.84□□□□□ -0.83
SMN1-206ENST00000507905 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.84□□□□□ -0.83
SMN1-206ENST00000507905 SEZ6L2Q6UXD5 910 aa9.84□□□□□ -0.83
SMN1-206ENST00000507905 ZNF765Q7L2R6 523 aa9.84□□□□□ -0.83
SMN1-206ENST00000507905 C1GALT1Q9NS00 363 aa9.84□□□□□ -0.83
SMN1-206ENST00000507905 CCDC39Q9UFE4 941 aa9.84□□□□□ -0.83
SMN1-206ENST00000507905 AKAP2Q9Y2D5 859 aa9.84□□□□□ -0.83
SMN1-206ENST00000507905 TMPRSS2O15393 492 aa9.83□□□□□ -0.84
SMN1-206ENST00000507905 NXPE4Q6UWF7 544 aa9.83□□□□□ -0.84
SMN1-206ENST00000507905 PIDD1Q9HB75 910 aa9.83□□□□□ -0.84
SMN1-206ENST00000507905 LRRC4CQ9HCJ2 640 aa9.83□□□□□ -0.84
SMN1-206ENST00000507905 KRT82Q9NSB4 513 aa9.83□□□□□ -0.84
SMN1-206ENST00000507905 BSDC1Q9NW68 430 aaPredicted RBP9.83□□□□□ -0.84
SMN1-206ENST00000507905 CRIM1Q9NZV1 1036 aa9.83□□□□□ -0.84
SMN1-206ENST00000507905 ZNF862O60290 1169 aa9.82□□□□□ -0.84
SMN1-206ENST00000507905 PRNPP04156 253 aa9.82□□□□□ -0.84
SMN1-206ENST00000507905 ID3Q02535 119 aa9.82□□□□□ -0.84
SMN1-206ENST00000507905 ENOX2Q16206 610 aaKnown RBP9.82□□□□□ -0.84
SMN1-206ENST00000507905 KIF4BQ2VIQ3 1234 aa9.82□□□□□ -0.84
SMN1-206ENST00000507905 OGFOD3Q6PK18 319 aa9.82□□□□□ -0.84
SMN1-206ENST00000507905 KCNB2Q92953 911 aa9.82□□□□□ -0.84
SMN1-206ENST00000507905 FANCD2OSQ96PS1 177 aa9.82□□□□□ -0.84
SMN1-206ENST00000507905 ATXN3LQ9H3M9 355 aa9.82□□□□□ -0.84
SMN1-206ENST00000507905 VSIG10LQ86VR7 867 aa9.8□□□□□ -0.84
SMN1-206ENST00000507905 ABI1Q8IZP0 508 aa9.8□□□□□ -0.84
SMN1-206ENST00000507905 FBXL18Q96ME1 805 aa9.8□□□□□ -0.84
SMN1-206ENST00000507905 DISC1Q9NRI5 854 aa9.8□□□□□ -0.84
SMN1-206ENST00000507905 ZC3H7BQ9UGR2 993 aaKnown RBP9.8□□□□□ -0.84
SMN1-206ENST00000507905 ADGRE2Q9UHX3 823 aa9.8□□□□□ -0.84
SMN1-206ENST00000507905 PDZD3Q86UT5 571 aa9.79□□□□□ -0.84
SMN1-206ENST00000507905 SULF2Q8IWU5 870 aa9.79□□□□□ -0.84
SMN1-206ENST00000507905 TP53INP2Q8IXH6 220 aa9.79□□□□□ -0.84
SMN1-206ENST00000507905 RNGTTO60942 597 aaKnown RBP9.78□□□□□ -0.84
SMN1-206ENST00000507905 ARNTP27540 789 aa9.78□□□□□ -0.84
SMN1-206ENST00000507905 CYP27C1Q4G0S4 372 aa9.78□□□□□ -0.84
SMN1-206ENST00000507905 ZSCAN29Q8IWY8 852 aaPredicted RBP9.78□□□□□ -0.84
SMN1-206ENST00000507905 SMYD4Q8IYR2 804 aaPredicted RBP9.78□□□□□ -0.84
SMN1-206ENST00000507905 PCDHGC5Q9Y5F6 944 aa9.78□□□□□ -0.84
SMN1-206ENST00000507905 MAPK8P45983 427 aa9.77□□□□□ -0.85
SMN1-206ENST00000507905 TTLL4Q14679 1199 aa9.77□□□□□ -0.85
SMN1-206ENST00000507905 STK35Q8TDR2 534 aa9.77□□□□□ -0.85
SMN1-206ENST00000507905 EMILIN2Q9BXX0 1053 aa9.77□□□□□ -0.85
SMN1-206ENST00000507905 NME2P22392 152 aa9.76□□□□□ -0.85
SMN1-206ENST00000507905 MAP1SQ66K74 1059 aaPredicted RBP9.76□□□□□ -0.85
SMN1-206ENST00000507905 IVNS1ABPQ9Y6Y0 642 aa9.76□□□□□ -0.85
SMN1-206ENST00000507905 HCLS1P14317 486 aaPredicted RBP9.75□□□□□ -0.85
SMN1-206ENST00000507905 TXKP42681 527 aa9.75□□□□□ -0.85
SMN1-206ENST00000507905 CDK5R2Q13319 367 aa9.75□□□□□ -0.85
SMN1-206ENST00000507905 NFXL1Q6ZNB6 911 aa9.75□□□□□ -0.85
SMN1-206ENST00000507905 FLCNQ8NFG4 579 aa9.75□□□□□ -0.85
SMN1-206ENST00000507905 FBF1Q8TES7 1133 aa9.75□□□□□ -0.85
SMN1-206ENST00000507905 KRTAP4-12Q9BQ66 201 aa9.75□□□□□ -0.85
SMN1-206ENST00000507905 SRCIN1Q9C0H9 1055 aa9.75□□□□□ -0.85
SMN1-206ENST00000507905 CBX8Q9HC52 389 aa9.75□□□□□ -0.85
SMN1-206ENST00000507905 FAM87AP0C7U9 286 aa9.74□□□□□ -0.85
SMN1-206ENST00000507905 GSTT1P30711 240 aa9.74□□□□□ -0.85
SMN1-206ENST00000507905 C3orf58Q8NDZ4 430 aa9.74□□□□□ -0.85
SMN1-206ENST00000507905 NECAB3Q96P71 396 aaPredicted RBP9.74□□□□□ -0.85
SMN1-206ENST00000507905 FMNL2Q96PY5 1086 aa9.74□□□□□ -0.85
SMN1-206ENST00000507905 CEP44Q9C0F1 390 aa9.74□□□□□ -0.85
SMN1-206ENST00000507905 PCOLCE2Q9UKZ9 415 aa9.74□□□□□ -0.85
SMN1-206ENST00000507905 RNF114Q9Y508 228 aa9.74□□□□□ -0.85
SMN1-206ENST00000507905 KCNA1Q09470 495 aa9.73□□□□□ -0.85
SMN1-206ENST00000507905 ZC3H12AQ5D1E8 599 aaKnown RBP9.73□□□□□ -0.85
SMN1-206ENST00000507905 TPTE2Q6XPS3 522 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms