RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 PHKA1P46020 1223 aa17.83■□□□□ 0.44
HMGCS1-203ENST00000507004 G3BP1Q13283 466 aaKnown RBP eCLIP17.83■□□□□ 0.448e-8■□□□□ 9.2
HMGCS1-203ENST00000507004 VGLL4Q14135 290 aa17.83■□□□□ 0.44
HMGCS1-203ENST00000507004 IGF2BP3O00425 579 aaKnown RBP eCLIP17.82■□□□□ 0.44
HMGCS1-203ENST00000507004 IGSF3O75054 1194 aa17.82■□□□□ 0.44
HMGCS1-203ENST00000507004 BCAR3O75815 825 aa17.82■□□□□ 0.44
HMGCS1-203ENST00000507004 PRDX5P30044 214 aa17.82■□□□□ 0.44
HMGCS1-203ENST00000507004 DZIP1Q86YF9 867 aaKnown RBP17.82■□□□□ 0.44
HMGCS1-203ENST00000507004 FAM163AQ96GL9 167 aaPredicted RBP17.82■□□□□ 0.44
HMGCS1-203ENST00000507004 WRNIP1Q96S55 665 aa17.82■□□□□ 0.44
HMGCS1-203ENST00000507004 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.82■□□□□ 0.44
HMGCS1-203ENST00000507004 MAP4K4O95819 1239 aaPredicted RBP17.81■□□□□ 0.44
HMGCS1-203ENST00000507004 CETPP11597 493 aa17.81■□□□□ 0.44
HMGCS1-203ENST00000507004 GJA5P36382 358 aa17.81■□□□□ 0.44
HMGCS1-203ENST00000507004 CACNB3P54284 484 aa17.81■□□□□ 0.44
HMGCS1-203ENST00000507004 GORABQ5T7V8 394 aa17.81■□□□□ 0.44
HMGCS1-203ENST00000507004 CDC42EP5Q6NZY7 148 aa17.81■□□□□ 0.44
HMGCS1-203ENST00000507004 FTSJ3Q8IY81 847 aaKnown RBP17.81■□□□□ 0.44
HMGCS1-203ENST00000507004 XAGE2Q96GT9 111 aa17.81■□□□□ 0.44
HMGCS1-203ENST00000507004 ZFYVE28Q9HCC9 887 aa17.81■□□□□ 0.44
HMGCS1-203ENST00000507004 HPS5Q9UPZ3 1129 aa17.81■□□□□ 0.44
HMGCS1-203ENST00000507004 GAKO14976 1311 aa17.8■□□□□ 0.44
HMGCS1-203ENST00000507004 CCL15-CCL14A0A0B4J2E2 113 aa17.8■□□□□ 0.44
HMGCS1-203ENST00000507004 ENTPD3O75355 529 aa17.8■□□□□ 0.44
HMGCS1-203ENST00000507004 TIMM10P62072 90 aa17.8■□□□□ 0.44
HMGCS1-203ENST00000507004 PPATQ06203 517 aa17.8■□□□□ 0.44
HMGCS1-203ENST00000507004 TFCP2Q12800 502 aa17.8■□□□□ 0.44
HMGCS1-203ENST00000507004 DIXDC1Q155Q3 683 aa17.8■□□□□ 0.44
HMGCS1-203ENST00000507004 CCL15Q16663 113 aa17.8■□□□□ 0.44
HMGCS1-203ENST00000507004 MIER1Q8N108 512 aa17.8■□□□□ 0.44
HMGCS1-203ENST00000507004 CLUAP1Q96AJ1 413 aa17.8■□□□□ 0.44
HMGCS1-203ENST00000507004 MS4A4AQ96JQ5 239 aa17.8■□□□□ 0.44
HMGCS1-203ENST00000507004 IDI2Q9BXS1 227 aa17.8■□□□□ 0.44
HMGCS1-203ENST00000507004 USP40Q9NVE5 1235 aa17.8■□□□□ 0.44
HMGCS1-203ENST00000507004 ZBED9Q6R2W3 1325 aa17.79■□□□□ 0.44
HMGCS1-203ENST00000507004 OTOFQ9HC10 1997 aa17.79■□□□□ 0.44
HMGCS1-203ENST00000507004 LDHCP07864 332 aa17.79■□□□□ 0.44
HMGCS1-203ENST00000507004 UQCRFS1P1P0C7P4 283 aa17.79■□□□□ 0.44
HMGCS1-203ENST00000507004 ADORA1P30542 326 aa17.79■□□□□ 0.44
HMGCS1-203ENST00000507004 GSTO1P78417 241 aa17.79■□□□□ 0.44
HMGCS1-203ENST00000507004 PPIL2Q13356 520 aa17.79■□□□□ 0.44
HMGCS1-203ENST00000507004 SNAPC2Q13487 334 aa17.79■□□□□ 0.44
HMGCS1-203ENST00000507004 RASGRF1Q13972 1273 aa17.79■□□□□ 0.44
HMGCS1-203ENST00000507004 ERICH6Q7L0X2 663 aa17.79■□□□□ 0.44
HMGCS1-203ENST00000507004 CDAN1Q8IWY9 1227 aa17.79■□□□□ 0.44
HMGCS1-203ENST00000507004 OTUD5Q96G74 571 aa17.79■□□□□ 0.44
HMGCS1-203ENST00000507004 NEUROD6Q96NK8 337 aa17.79■□□□□ 0.44
HMGCS1-203ENST00000507004 GPR108Q9NPR9 543 aa17.79■□□□□ 0.44
HMGCS1-203ENST00000507004 ABCF2Q9UG63 623 aa17.79■□□□□ 0.44
HMGCS1-203ENST00000507004 SNCAIPQ9Y6H5 919 aa17.79■□□□□ 0.44
HMGCS1-203ENST00000507004 MS4A1P11836 297 aa17.78■□□□□ 0.44
HMGCS1-203ENST00000507004 SP3Q02447 781 aa17.78■□□□□ 0.44
HMGCS1-203ENST00000507004 CRHR2Q13324 411 aa17.78■□□□□ 0.44
HMGCS1-203ENST00000507004 TMEM57Q8N5G2 664 aa17.78■□□□□ 0.44
HMGCS1-203ENST00000507004 ZNF112Q9UJU3 913 aa17.78■□□□□ 0.44
HMGCS1-203ENST00000507004 NPM3O75607 178 aaKnown RBP17.77■□□□□ 0.44
HMGCS1-203ENST00000507004 TAF1CQ15572 869 aaPredicted RBP17.77■□□□□ 0.44
HMGCS1-203ENST00000507004 NOL9Q5SY16 702 aaKnown RBP17.77■□□□□ 0.44
HMGCS1-203ENST00000507004 BRI3BPQ8WY22 251 aa17.77■□□□□ 0.44
HMGCS1-203ENST00000507004 PTPN18Q99952 460 aa17.77■□□□□ 0.44
HMGCS1-203ENST00000507004 R3HDMLQ9H3Y0 253 aa17.77■□□□□ 0.44
HMGCS1-203ENST00000507004 TRIM17Q9Y577 477 aa17.77■□□□□ 0.44
HMGCS1-203ENST00000507004 PNMA6EA0A0J9YXQ4 647 aa17.76■□□□□ 0.43
HMGCS1-203ENST00000507004 ARID4AP29374 1257 aaPredicted RBP17.76■□□□□ 0.43
HMGCS1-203ENST00000507004 ATP8B2P98198 1209 aa17.76■□□□□ 0.43
HMGCS1-203ENST00000507004 TCP10Q12799 353 aa17.76■□□□□ 0.43
HMGCS1-203ENST00000507004 SPATA5Q8NB90 893 aa17.76■□□□□ 0.43
HMGCS1-203ENST00000507004 SSH3Q8TE77 659 aa17.76■□□□□ 0.43
HMGCS1-203ENST00000507004 NFIAQ12857 509 aa17.75■□□□□ 0.43
HMGCS1-203ENST00000507004 OS9Q13438 667 aaPredicted RBP17.75■□□□□ 0.43
HMGCS1-203ENST00000507004 POLA2Q14181 598 aa17.75■□□□□ 0.43
HMGCS1-203ENST00000507004 CCDC158Q5M9N0 1113 aa17.75■□□□□ 0.43
HMGCS1-203ENST00000507004 OTOP1Q7RTM1 612 aa17.75■□□□□ 0.43
HMGCS1-203ENST00000507004 ZKSCAN4Q969J2 545 aaPredicted RBP17.75■□□□□ 0.43
HMGCS1-203ENST00000507004 EFCC1Q9HA90 598 aa17.75■□□□□ 0.43
HMGCS1-203ENST00000507004 FAM198AQ9UFP1 575 aa17.75■□□□□ 0.43
HMGCS1-203ENST00000507004 MROH7-TTC4A0A0A0MT08 1334 aa17.74■□□□□ 0.43
HMGCS1-203ENST00000507004 GPR75-ASB3A0A0A6YYF3 556 aa17.74■□□□□ 0.43
HMGCS1-203ENST00000507004 IRF6O14896 467 aa17.74■□□□□ 0.43
HMGCS1-203ENST00000507004 RGS3P49796 1198 aa17.74■□□□□ 0.43
HMGCS1-203ENST00000507004 MIGA2Q7L4E1 593 aa17.74■□□□□ 0.43
HMGCS1-203ENST00000507004 ITPRIPQ8IWB1 547 aa17.74■□□□□ 0.43
HMGCS1-203ENST00000507004 HMG20BQ9P0W2 317 aa17.74■□□□□ 0.43
HMGCS1-203ENST00000507004 AK9Q5TCS8 1911 aa17.74■□□□□ 0.43
HMGCS1-203ENST00000507004 MYH2Q9UKX2 1941 aa17.74■□□□□ 0.43
HMGCS1-203ENST00000507004 CXCL11O14625 94 aa17.73■□□□□ 0.43
HMGCS1-203ENST00000507004 GNRH1P01148 92 aa17.73■□□□□ 0.43
HMGCS1-203ENST00000507004 BTDP43251 543 aa17.73■□□□□ 0.43
HMGCS1-203ENST00000507004 KIF22Q14807 665 aa17.73■□□□□ 0.43
HMGCS1-203ENST00000507004 ZSCAN29Q8IWY8 852 aaPredicted RBP17.73■□□□□ 0.43
HMGCS1-203ENST00000507004 CNKSR2Q8WXI2 1034 aa17.73■□□□□ 0.43
HMGCS1-203ENST00000507004 ZNF512BQ96KM6 892 aaPredicted RBP17.73■□□□□ 0.43
HMGCS1-203ENST00000507004 NOL10Q9BSC4 688 aaKnown RBP17.73■□□□□ 0.43
HMGCS1-203ENST00000507004 KCNH4Q9UQ05 1017 aa17.73■□□□□ 0.43
HMGCS1-203ENST00000507004 NOP58Q9Y2X3 529 aaKnown RBP17.73■□□□□ 0.43
HMGCS1-203ENST00000507004 RFX7Q2KHR2 1363 aa17.72■□□□□ 0.43
HMGCS1-203ENST00000507004 TLR2O60603 784 aa17.72■□□□□ 0.43
HMGCS1-203ENST00000507004 SURF6O75683 361 aaKnown RBP17.72■□□□□ 0.43
HMGCS1-203ENST00000507004 INPP5BP32019 993 aa17.72■□□□□ 0.43
HMGCS1-203ENST00000507004 SOX10P56693 466 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms