RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 NAA16Q6N069 864 aaPredicted RBP10.71□□□□□ -0.69
SCAMP1-202ENST00000506858 OGFOD1Q8N543 542 aa10.71□□□□□ -0.69
SCAMP1-202ENST00000506858 L3MBTL3Q96JM7 780 aaPredicted RBP10.71□□□□□ -0.69
SCAMP1-202ENST00000506858 SEC62Q99442 399 aaKnown RBP10.71□□□□□ -0.69
SCAMP1-202ENST00000506858 FSD1Q9BTV5 496 aa10.71□□□□□ -0.69
SCAMP1-202ENST00000506858 TAF1DQ9H5J8 278 aaPredicted RBP10.71□□□□□ -0.69
SCAMP1-202ENST00000506858 MYOZ2Q9NPC6 264 aa10.71□□□□□ -0.69
SCAMP1-202ENST00000506858 HACL1Q9UJ83 578 aa10.71□□□□□ -0.69
SCAMP1-202ENST00000506858 DAGLAQ9Y4D2 1042 aa10.71□□□□□ -0.69
SCAMP1-202ENST00000506858 ADAMTSL1Q8N6G6 1762 aa10.71□□□□□ -0.7
SCAMP1-202ENST00000506858 PDS5AQ29RF7 1337 aaKnown RBP10.71□□□□□ -0.7
SCAMP1-202ENST00000506858 ZNF532Q9HCE3 1301 aa10.71□□□□□ -0.7
SCAMP1-202ENST00000506858 MYH13Q9UKX3 1938 aa10.71□□□□□ -0.7
SCAMP1-202ENST00000506858 RPS12P25398 132 aaKnown RBP10.7□□□□□ -0.7
SCAMP1-202ENST00000506858 SPTY2D1Q68D10 685 aaPredicted RBP10.7□□□□□ -0.7
SCAMP1-202ENST00000506858 KBTBD3Q8NAB2 608 aa10.7□□□□□ -0.7
SCAMP1-202ENST00000506858 ZNF784Q8NCA9 323 aaPredicted RBP10.7□□□□□ -0.7
SCAMP1-202ENST00000506858 SPOCK2Q92563 424 aa10.7□□□□□ -0.7
SCAMP1-202ENST00000506858 TDRD3Q9H7E2 651 aaKnown RBP10.7□□□□□ -0.7
SCAMP1-202ENST00000506858 TCRBV5S4A2TA0A5A2 114 aa10.69□□□□□ -0.7
SCAMP1-202ENST00000506858 WNT10BO00744 389 aa10.69□□□□□ -0.7
SCAMP1-202ENST00000506858 MAP3K12Q12852 859 aa10.69□□□□□ -0.7
SCAMP1-202ENST00000506858 DLGAP5Q15398 846 aa10.69□□□□□ -0.7
SCAMP1-202ENST00000506858 KIF4BQ2VIQ3 1234 aa10.69□□□□□ -0.7
SCAMP1-202ENST00000506858 APOBEC3HQ6NTF7 200 aaKnown RBP10.69□□□□□ -0.7
SCAMP1-202ENST00000506858 CCDC129Q6ZRS4 1044 aa10.69□□□□□ -0.7
SCAMP1-202ENST00000506858 ZGPATQ8N5A5 531 aaKnown RBP10.69□□□□□ -0.7
SCAMP1-202ENST00000506858 TEKT1Q969V4 418 aa10.69□□□□□ -0.7
SCAMP1-202ENST00000506858 FAM227BQ96M60 508 aa10.69□□□□□ -0.7
SCAMP1-202ENST00000506858 GPBP1L1Q9HC44 474 aaPredicted RBP10.69□□□□□ -0.7
SCAMP1-202ENST00000506858 AATFQ9NY61 560 aaKnown RBP eCLIP10.69□□□□□ -0.7
SCAMP1-202ENST00000506858 HDAC9Q9UKV0 1011 aa10.69□□□□□ -0.7
SCAMP1-202ENST00000506858 MYO3BQ8WXR4 1341 aa10.69□□□□□ -0.7
SCAMP1-202ENST00000506858 PSME4Q14997 1843 aa10.69□□□□□ -0.7
SCAMP1-202ENST00000506858 VEGFAP15692 232 aaPredicted RBP10.69□□□□□ -0.7
SCAMP1-202ENST00000506858 ADD2P35612 726 aa10.69□□□□□ -0.7
SCAMP1-202ENST00000506858 BTDP43251 543 aa10.69□□□□□ -0.7
SCAMP1-202ENST00000506858 FMR1Q06787 632 aaKnown RBP eCLIP10.69□□□□□ -0.7
SCAMP1-202ENST00000506858 TTF1Q15361 905 aaPredicted RBP10.69□□□□□ -0.7
SCAMP1-202ENST00000506858 PRAMEF18Q5VWM3 479 aa10.69□□□□□ -0.7
SCAMP1-202ENST00000506858 OSBP2Q969R2 916 aa10.69□□□□□ -0.7
SCAMP1-202ENST00000506858 EVI5LQ96CN4 794 aa10.69□□□□□ -0.7
SCAMP1-202ENST00000506858 PUS7LQ9H0K6 701 aaKnown RBP10.69□□□□□ -0.7
SCAMP1-202ENST00000506858 ADARB2Q9NS39 739 aaKnown RBP10.69□□□□□ -0.7
SCAMP1-202ENST00000506858 PCDHB13Q9Y5F0 798 aa10.69□□□□□ -0.7
SCAMP1-202ENST00000506858 M0R2C6 588 aa10.68□□□□□ -0.7
SCAMP1-202ENST00000506858 RNF113AO15541 343 aaKnown RBP10.68□□□□□ -0.7
SCAMP1-202ENST00000506858 CDC42EP5Q6NZY7 148 aa10.68□□□□□ -0.7
SCAMP1-202ENST00000506858 CNTROBQ8N137 903 aa10.68□□□□□ -0.7
SCAMP1-202ENST00000506858 SH3RF3Q8TEJ3 882 aaPredicted RBP10.68□□□□□ -0.7
SCAMP1-202ENST00000506858 ZBED3Q96IU2 234 aaPredicted RBP10.68□□□□□ -0.7
SCAMP1-202ENST00000506858 IL25Q9H293 177 aa10.68□□□□□ -0.7
SCAMP1-202ENST00000506858 ARMT1Q9H993 441 aa10.68□□□□□ -0.7
SCAMP1-202ENST00000506858 VEZTQ9HBM0 779 aa10.68□□□□□ -0.7
SCAMP1-202ENST00000506858 USP40Q9NVE5 1235 aa10.68□□□□□ -0.7
SCAMP1-202ENST00000506858 SUGT1Q9Y2Z0 365 aa10.68□□□□□ -0.7
SCAMP1-202ENST00000506858 MROH7-TTC4A0A0A0MT08 1334 aa10.68□□□□□ -0.7
SCAMP1-202ENST00000506858 A0A0D9SFI3 127 aa10.67□□□□□ -0.7
SCAMP1-202ENST00000506858 TCP10L2B9ZVM9 353 aa10.67□□□□□ -0.7
SCAMP1-202ENST00000506858 KIF3CO14782 793 aa10.67□□□□□ -0.7
SCAMP1-202ENST00000506858 MAP3K13O43283 966 aa10.67□□□□□ -0.7
SCAMP1-202ENST00000506858 PRKAB2O43741 272 aa10.67□□□□□ -0.7
SCAMP1-202ENST00000506858 SLURP2P0DP57 97 aa10.67□□□□□ -0.7
SCAMP1-202ENST00000506858 NFIAQ12857 509 aa10.67□□□□□ -0.7
SCAMP1-202ENST00000506858 NMIQ13287 307 aaPredicted RBP10.67□□□□□ -0.7
SCAMP1-202ENST00000506858 SLC4A8Q2Y0W8 1093 aa10.67□□□□□ -0.7
SCAMP1-202ENST00000506858 ANGEL2Q5VTE6 544 aaKnown RBP10.67□□□□□ -0.7
SCAMP1-202ENST00000506858 MAP1SQ66K74 1059 aaPredicted RBP10.67□□□□□ -0.7
SCAMP1-202ENST00000506858 HHIPL2Q6UWX4 724 aa10.67□□□□□ -0.7
SCAMP1-202ENST00000506858 CDAN1Q8IWY9 1227 aa10.67□□□□□ -0.7
SCAMP1-202ENST00000506858 ZFPM1Q8IX07 1006 aa10.67□□□□□ -0.7
SCAMP1-202ENST00000506858 LCORLQ8N3X6 602 aa10.67□□□□□ -0.7
SCAMP1-202ENST00000506858 ZDHHC15Q96MV8 337 aa10.67□□□□□ -0.7
SCAMP1-202ENST00000506858 ZNF70Q9UC06 446 aaPredicted RBP10.67□□□□□ -0.7
SCAMP1-202ENST00000506858 SERPINA10Q9UK55 444 aa10.67□□□□□ -0.7
SCAMP1-202ENST00000506858 GAKO14976 1311 aa10.67□□□□□ -0.7
SCAMP1-202ENST00000506858 GPR75-ASB3A0A0A6YYF3 556 aa10.66□□□□□ -0.7
SCAMP1-202ENST00000506858 IQCA1LA6NCM1 817 aa10.66□□□□□ -0.7
SCAMP1-202ENST00000506858 MBD4O95243 580 aa10.66□□□□□ -0.7
SCAMP1-202ENST00000506858 TIE1P35590 1138 aa10.66□□□□□ -0.7
SCAMP1-202ENST00000506858 RHBDL3P58872 404 aa10.66□□□□□ -0.7
SCAMP1-202ENST00000506858 GSTO1P78417 241 aa10.66□□□□□ -0.7
SCAMP1-202ENST00000506858 TCP10Q12799 353 aa10.66□□□□□ -0.7
SCAMP1-202ENST00000506858 CWC27Q6UX04 472 aaKnown RBP10.66□□□□□ -0.7
SCAMP1-202ENST00000506858 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.66□□□□□ -0.7
SCAMP1-202ENST00000506858 GGA3Q9NZ52 723 aa10.66□□□□□ -0.7
SCAMP1-202ENST00000506858 MYH2Q9UKX2 1941 aa10.66□□□□□ -0.7
SCAMP1-202ENST00000506858 MAGEB6P1A0A0J9YX57 407 aa10.66□□□□□ -0.7
SCAMP1-202ENST00000506858 ADM5C9JUS6 153 aa10.66□□□□□ -0.7
SCAMP1-202ENST00000506858 LDHCP07864 332 aa10.66□□□□□ -0.7
SCAMP1-202ENST00000506858 HDLBPQ00341 1268 aaKnown RBP10.66□□□□□ -0.7
SCAMP1-202ENST00000506858 PICALMQ13492 652 aa10.66□□□□□ -0.7
SCAMP1-202ENST00000506858 USP48Q86UV5 1035 aa10.66□□□□□ -0.7
SCAMP1-202ENST00000506858 FAM163AQ96GL9 167 aaPredicted RBP10.66□□□□□ -0.7
SCAMP1-202ENST00000506858 RIOK1Q9BRS2 568 aaKnown RBP10.66□□□□□ -0.7
SCAMP1-202ENST00000506858 GLIS2Q9BZE0 524 aaPredicted RBP10.66□□□□□ -0.7
SCAMP1-202ENST00000506858 DDX4Q9NQI0 724 aaKnown RBP10.66□□□□□ -0.7
SCAMP1-202ENST00000506858 WDR90Q96KV7 1748 aa10.65□□□□□ -0.7
SCAMP1-202ENST00000506858 MAST3O60307 1309 aa10.65□□□□□ -0.7
SCAMP1-202ENST00000506858 SMIM22K7EJ46 135 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms