RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 MECOMQ03112 1051 aa14.35□□□□□ -0.11
LIN54-206ENST00000506560 ALX1Q15699 326 aa14.35□□□□□ -0.11
LIN54-206ENST00000506560 FAM184AQ8NB25 1140 aa14.35□□□□□ -0.11
LIN54-206ENST00000506560 PNPLA7Q6ZV29 1317 aa14.35□□□□□ -0.11
LIN54-206ENST00000506560 MAGEB6P1A0A0J9YX57 407 aa14.35□□□□□ -0.11
LIN54-206ENST00000506560 POLRMTO00411 1230 aaKnown RBP14.35□□□□□ -0.11
LIN54-206ENST00000506560 PDCP20941 246 aa14.35□□□□□ -0.11
LIN54-206ENST00000506560 TRDNQ13061 729 aa14.35□□□□□ -0.11
LIN54-206ENST00000506560 SLC4A8Q2Y0W8 1093 aa14.35□□□□□ -0.11
LIN54-206ENST00000506560 NSUN4Q96CB9 384 aaKnown RBP14.35□□□□□ -0.11
LIN54-206ENST00000506560 TOMM22Q9NS69 142 aa14.35□□□□□ -0.11
LIN54-206ENST00000506560 MINDY4BA8MYZ0 360 aa14.34□□□□□ -0.11
LIN54-206ENST00000506560 SH2B2O14492 632 aaPredicted RBP14.34□□□□□ -0.11
LIN54-206ENST00000506560 APBA3O96018 575 aa14.34□□□□□ -0.11
LIN54-206ENST00000506560 ADD1P35611 737 aaKnown RBP14.34□□□□□ -0.11
LIN54-206ENST00000506560 ZNF445P59923 1031 aa14.34□□□□□ -0.11
LIN54-206ENST00000506560 GPSM2P81274 684 aa14.34□□□□□ -0.11
LIN54-206ENST00000506560 RESTQ13127 1097 aa14.34□□□□□ -0.11
LIN54-206ENST00000506560 NAA16Q6N069 864 aaPredicted RBP14.34□□□□□ -0.11
LIN54-206ENST00000506560 OLFM4Q6UX06 510 aa14.34□□□□□ -0.11
LIN54-206ENST00000506560 AIFM3Q96NN9 605 aa14.34□□□□□ -0.11
LIN54-206ENST00000506560 ANKRD2Q9GZV1 360 aa14.34□□□□□ -0.11
LIN54-206ENST00000506560 MRE11P49959 708 aa14.34□□□□□ -0.11
LIN54-206ENST00000506560 RBM6P78332 1123 aaKnown RBP14.34□□□□□ -0.11
LIN54-206ENST00000506560 CEBPZQ03701 1054 aaKnown RBP14.34□□□□□ -0.11
LIN54-206ENST00000506560 COL23A1Q86Y22 540 aaPredicted RBP14.34□□□□□ -0.11
LIN54-206ENST00000506560 FBXL16Q8N461 479 aa14.34□□□□□ -0.11
LIN54-206ENST00000506560 IGDCC4Q8TDY8 1250 aa14.34□□□□□ -0.11
LIN54-206ENST00000506560 RPGRQ92834 1020 aaKnown RBP14.34□□□□□ -0.11
LIN54-206ENST00000506560 RBSNQ9H1K0 784 aa14.34□□□□□ -0.11
LIN54-206ENST00000506560 AATFQ9NY61 560 aaKnown RBP eCLIP14.34□□□□□ -0.11
LIN54-206ENST00000506560 H3BQV1 296 aa14.34□□□□□ -0.11
LIN54-206ENST00000506560 MBD3O95983 291 aa14.34□□□□□ -0.11
LIN54-206ENST00000506560 CDC27P30260 824 aa14.34□□□□□ -0.11
LIN54-206ENST00000506560 AKNAD1Q5T1N1 836 aa14.34□□□□□ -0.11
LIN54-206ENST00000506560 IFFO2Q5TF58 517 aa14.34□□□□□ -0.11
LIN54-206ENST00000506560 MICU3Q86XE3 530 aa14.34□□□□□ -0.11
LIN54-206ENST00000506560 LLPHQ9BRT6 129 aaKnown RBP14.34□□□□□ -0.11
LIN54-206ENST00000506560 ANGEL1Q9UNK9 670 aaKnown RBP14.34□□□□□ -0.11
LIN54-206ENST00000506560 CRY2Q49AN0 593 aa14.33□□□□□ -0.12
LIN54-206ENST00000506560 LY9Q9HBG7 655 aa14.33□□□□□ -0.12
LIN54-206ENST00000506560 ATP6V1DQ9Y5K8 247 aa14.33□□□□□ -0.12
LIN54-206ENST00000506560 PRDM1O75626 825 aa14.33□□□□□ -0.12
LIN54-206ENST00000506560 MSL1Q68DK7 614 aa14.33□□□□□ -0.12
LIN54-206ENST00000506560 PPARAQ07869 468 aa14.32□□□□□ -0.12
LIN54-206ENST00000506560 APOA5Q6Q788 366 aa14.32□□□□□ -0.12
LIN54-206ENST00000506560 ILDR1Q86SU0 546 aaPredicted RBP14.32□□□□□ -0.12
LIN54-206ENST00000506560 MYH2Q9UKX2 1941 aa14.32□□□□□ -0.12
LIN54-206ENST00000506560 MFSD6Q6ZSS7 791 aa14.32□□□□□ -0.12
LIN54-206ENST00000506560 UBE2HP62256 183 aa14.31□□□□□ -0.12
LIN54-206ENST00000506560 KRT85P78386 507 aa14.31□□□□□ -0.12
LIN54-206ENST00000506560 ST5P78524 1137 aa14.31□□□□□ -0.12
LIN54-206ENST00000506560 DIXDC1Q155Q3 683 aa14.31□□□□□ -0.12
LIN54-206ENST00000506560 TMEM67Q5HYA8 995 aa14.31□□□□□ -0.12
LIN54-206ENST00000506560 PHKBQ93100 1093 aa14.31□□□□□ -0.12
LIN54-206ENST00000506560 ZMYM6O95789 1325 aa14.31□□□□□ -0.12
LIN54-206ENST00000506560 UFL1O94874 794 aa14.31□□□□□ -0.12
LIN54-206ENST00000506560 CYP2D6P10635 497 aa14.31□□□□□ -0.12
LIN54-206ENST00000506560 RNF214Q8ND24 703 aa14.31□□□□□ -0.12
LIN54-206ENST00000506560 NACAP1Q9BZK3 213 aa14.31□□□□□ -0.12
LIN54-206ENST00000506560 FAM217BQ9NTX9 383 aaPredicted RBP14.31□□□□□ -0.12
LIN54-206ENST00000506560 IFIT3O14879 490 aaKnown RBP14.3□□□□□ -0.12
LIN54-206ENST00000506560 GNAT2P19087 354 aa14.3□□□□□ -0.12
LIN54-206ENST00000506560 CMTR1Q8N1G2 835 aaKnown RBP14.3□□□□□ -0.12
LIN54-206ENST00000506560 STAG1Q8WVM7 1258 aa14.3□□□□□ -0.12
LIN54-206ENST00000506560 AKT1S1Q96B36 256 aa14.3□□□□□ -0.12
LIN54-206ENST00000506560 ORC3Q9UBD5 711 aaPredicted RBP14.3□□□□□ -0.12
LIN54-206ENST00000506560 POLLQ9UGP5 575 aa14.3□□□□□ -0.12
LIN54-206ENST00000506560 XDHP47989 1333 aa14.3□□□□□ -0.12
LIN54-206ENST00000506560 LIG1P18858 919 aa14.3□□□□□ -0.12
LIN54-206ENST00000506560 HMGN5P82970 282 aaKnown RBP14.3□□□□□ -0.12
LIN54-206ENST00000506560 NFXL1Q6ZNB6 911 aa14.3□□□□□ -0.12
LIN54-206ENST00000506560 LEO1Q8WVC0 666 aaPredicted RBP14.3□□□□□ -0.12
LIN54-206ENST00000506560 METAP2P50579 478 aaKnown RBP eCLIP14.29□□□□□ -0.12
LIN54-206ENST00000506560 ZNF772Q68DY9 489 aaPredicted RBP14.29□□□□□ -0.12
LIN54-206ENST00000506560 LRSAM1Q6UWE0 723 aa14.29□□□□□ -0.12
LIN54-206ENST00000506560 TIAM2Q8IVF5 1701 aa14.29□□□□□ -0.12
LIN54-206ENST00000506560 PGBD1Q96JS3 809 aa14.29□□□□□ -0.12
LIN54-206ENST00000506560 ANKRD31Q8N7Z5 1873 aa14.29□□□□□ -0.12
LIN54-206ENST00000506560 WDR19Q8NEZ3 1342 aa14.29□□□□□ -0.12
LIN54-206ENST00000506560 USP17L12C9JPN9 530 aa14.29□□□□□ -0.12
LIN54-206ENST00000506560 USP17L21D6R901 530 aa14.29□□□□□ -0.12
LIN54-206ENST00000506560 CPLX1O14810 134 aa14.29□□□□□ -0.12
LIN54-206ENST00000506560 SEMA3EO15041 775 aa14.29□□□□□ -0.12
LIN54-206ENST00000506560 RANBP6O60518 1105 aaKnown RBP14.29□□□□□ -0.12
LIN54-206ENST00000506560 CTR9Q6PD62 1173 aa14.29□□□□□ -0.12
LIN54-206ENST00000506560 RGS17Q9UGC6 210 aaPredicted RBP14.29□□□□□ -0.12
LIN54-206ENST00000506560 CCDC82Q8N4S0 544 aa14.28□□□□□ -0.12
LIN54-206ENST00000506560 TDRD7Q8NHU6 1098 aaKnown RBP14.28□□□□□ -0.12
LIN54-206ENST00000506560 SPATA32Q96LK8 384 aa14.28□□□□□ -0.12
LIN54-206ENST00000506560 NASPP49321 788 aaPredicted RBP14.28□□□□□ -0.12
LIN54-206ENST00000506560 USP28Q96RU2 1077 aa14.28□□□□□ -0.12
LIN54-206ENST00000506560 LEMD3Q9Y2U8 911 aa14.28□□□□□ -0.12
LIN54-206ENST00000506560 KIF28PB7ZC32 967 aa14.28□□□□□ -0.12
LIN54-206ENST00000506560 GIMAP6Q6P9H5 292 aa14.28□□□□□ -0.12
LIN54-206ENST00000506560 TMEM87BQ96K49 555 aa14.28□□□□□ -0.12
LIN54-206ENST00000506560 DCP1AQ9NPI6 582 aaPredicted RBP14.28□□□□□ -0.12
LIN54-206ENST00000506560 ZBTB43O43298 467 aa14.27□□□□□ -0.12
LIN54-206ENST00000506560 NMT2O60551 498 aa14.27□□□□□ -0.12
LIN54-206ENST00000506560 POLR3DP05423 398 aaPredicted RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms