RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 PNMA6FA0A0J9YX94 578 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 ZNF445P59923 1031 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 HDAC1Q13547 482 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-205ENST00000506154 CCDC30Q5VVM6 783 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 SLAIN1Q8ND83 568 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 SNX21Q969T3 373 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 SRPK1Q96SB4 655 aaKnown RBP2.72□□□□□ -1.97
NEDD4-205ENST00000506154 ARPC5LQ9BPX5 153 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 CYLDQ9NQC7 956 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 LHX6Q9UPM6 363 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 KIF3AQ9Y496 699 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 PCDHB11Q9Y5F2 797 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 LRRC10BA6NIK2 292 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 FXR2P51116 673 aaKnown RBP eCLIP2.72□□□□□ -1.97
NEDD4-205ENST00000506154 FOXK1P85037 733 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 RAB44Q7Z6P3 723 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-205ENST00000506154 PLPP7Q8NBV4 271 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 XAGE2Q96GT9 111 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.72□□□□□ -1.972e-6■■■□□ 17.3
NEDD4-205ENST00000506154 NIF3L1Q9GZT8 377 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 PPCSQ9HAB8 311 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 GOPCQ9HD26 462 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 KLK14Q9P0G3 267 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 KIAA1468Q9P260 1216 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 PARNO95453 639 aaKnown RBP2.72□□□□□ -1.97
NEDD4-205ENST00000506154 MCM4P33991 863 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 CCDC173Q0VFZ6 552 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 MPNDQ8N594 471 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 TIGD1Q96MW7 591 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 TMPRSS4Q9NRS4 437 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 V9GY48 417 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-205ENST00000506154 GOLIM4O00461 696 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 TLR3O15455 904 aaKnown RBP2.72□□□□□ -1.97
NEDD4-205ENST00000506154 ZSCAN9O15535 394 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-205ENST00000506154 ATP2B1P20020 1258 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 PEX19P40855 299 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 PSMD2Q13200 908 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 TCEAL1Q15170 157 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 C6orf132Q5T0Z8 1188 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 PPP1R18Q6NYC8 613 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 KSR2Q6VAB6 950 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 DBX2Q6ZNG2 339 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 RBM12BQ8IXT5 1001 aaKnown RBP2.72□□□□□ -1.97
NEDD4-205ENST00000506154 KCNB2Q92953 911 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 C19orf44Q9H6X5 657 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 BLOC1S6Q9UL45 172 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 HCN4Q9Y3Q4 1203 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 HOXD10P28358 340 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 ADCY2Q08462 1091 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 RAD51AP2Q09MP3 1159 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 TBC1D8BQ0IIM8 1120 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 NCAPG2Q86XI2 1143 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 JARID2Q92833 1246 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-205ENST00000506154 PRAM1Q96QH2 718 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 ZC3H12CQ9C0D7 883 aaKnown RBP2.71□□□□□ -1.98
NEDD4-205ENST00000506154 CXorf56Q9H5V9 222 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 DOLKQ9UPQ8 538 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 ACEP12821 1306 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 GIGYF1O75420 1035 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-205ENST00000506154 SASH1O94885 1247 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 HCLS1P14317 486 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-205ENST00000506154 SSFA2P28290 1259 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 GIMAP1Q8WWP7 306 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 CDK5RAP2Q96SN8 1893 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 PDLIM1O00151 329 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 HOXA2O43364 376 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 ATP9BO43861 1147 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 PPP4CP60510 307 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 LRRC41Q15345 812 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 LARP1BQ659C4 914 aaKnown RBP2.71□□□□□ -1.98
NEDD4-205ENST00000506154 LZTS2Q9BRK4 669 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-205ENST00000506154 TRAK1Q9UPV9 953 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 PTPRCP08575 1304 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 SOS1Q07889 1333 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-205ENST00000506154 POTEFA5A3E0 1075 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-205ENST00000506154 PPFIA4O75335 1185 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 LDHBP07195 334 aaKnown RBP2.71□□□□□ -1.98
NEDD4-205ENST00000506154 ZSCAN26Q16670 478 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 ZBTB33Q86T24 672 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 KLRG1Q96E93 195 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 ESF1Q9H501 851 aaKnown RBP2.71□□□□□ -1.98
NEDD4-205ENST00000506154 CGNQ9P2M7 1197 aaKnown RBP2.71□□□□□ -1.98
NEDD4-205ENST00000506154 NUDCQ9Y266 331 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 AKAP11Q9UKA4 1901 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 IRS4O14654 1257 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-205ENST00000506154 CTAG1AP78358 180 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 DUSP27Q5VZP5 1158 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 CDCA2Q69YH5 1023 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-205ENST00000506154 WAPLQ7Z5K2 1190 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 DRAXINQ8NBI3 349 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-205ENST00000506154 PARD3BQ8TEW8 1205 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 CCDC85AQ96PX6 553 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-205ENST00000506154 KANSL3Q9P2N6 904 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 ANAPC4Q9UJX5 808 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 SLC30A1Q9Y6M5 507 aa2.71□□□□□ -1.98
NEDD4-205ENST00000506154 UQCRHLA0A096LP55 91 aa2.7□□□□□ -1.98
NEDD4-205ENST00000506154 UQCRHP07919 91 aa2.7□□□□□ -1.98
NEDD4-205ENST00000506154 CASQ1P31415 396 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms