RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 MAP3K9P80192 1104 aa12.87□□□□□ -0.35
NR1I3-222ENST00000506018 PKN2Q16513 984 aaKnown RBP12.87□□□□□ -0.35
NR1I3-222ENST00000506018 SPTY2D1Q68D10 685 aaPredicted RBP12.87□□□□□ -0.35
NR1I3-222ENST00000506018 CCDC102BQ68D86 513 aa12.87□□□□□ -0.35
NR1I3-222ENST00000506018 CLMNQ96JQ2 1002 aa12.87□□□□□ -0.35
NR1I3-222ENST00000506018 CFHR5Q9BXR6 569 aa12.87□□□□□ -0.35
NR1I3-222ENST00000506018 PDS5AQ29RF7 1337 aaKnown RBP12.87□□□□□ -0.35
NR1I3-222ENST00000506018 RPAP1Q9BWH6 1393 aaPredicted RBP12.86□□□□□ -0.35
NR1I3-222ENST00000506018 A0A1B0GUL7 405 aa12.86□□□□□ -0.35
NR1I3-222ENST00000506018 WDHD1O75717 1129 aaPredicted RBP12.86□□□□□ -0.35
NR1I3-222ENST00000506018 PHKA1P46020 1223 aa12.86□□□□□ -0.35
NR1I3-222ENST00000506018 TFCP2Q12800 502 aa12.86□□□□□ -0.35
NR1I3-222ENST00000506018 APOBEC3HQ6NTF7 200 aaKnown RBP12.86□□□□□ -0.35
NR1I3-222ENST00000506018 DZIP1Q86YF9 867 aaKnown RBP12.86□□□□□ -0.35
NR1I3-222ENST00000506018 IFNL1Q8IU54 200 aa12.86□□□□□ -0.35
NR1I3-222ENST00000506018 TMEM57Q8N5G2 664 aa12.86□□□□□ -0.35
NR1I3-222ENST00000506018 TEPSINQ96N21 525 aa12.86□□□□□ -0.35
NR1I3-222ENST00000506018 NEUROD6Q96NK8 337 aa12.86□□□□□ -0.35
NR1I3-222ENST00000506018 ELP3Q9H9T3 547 aa12.86□□□□□ -0.35
NR1I3-222ENST00000506018 GPR25O00155 361 aa12.85□□□□□ -0.35
NR1I3-222ENST00000506018 CENPBP07199 599 aaPredicted RBP12.85□□□□□ -0.35
NR1I3-222ENST00000506018 MS4A1P11836 297 aa12.85□□□□□ -0.35
NR1I3-222ENST00000506018 PRDX5P30044 214 aa12.85□□□□□ -0.35
NR1I3-222ENST00000506018 CACNB3P54284 484 aa12.85□□□□□ -0.35
NR1I3-222ENST00000506018 TIMM10P62072 90 aa12.85□□□□□ -0.35
NR1I3-222ENST00000506018 OS9Q13438 667 aaPredicted RBP12.85□□□□□ -0.35
NR1I3-222ENST00000506018 ITPRIPQ8IWB1 547 aa12.85□□□□□ -0.35
NR1I3-222ENST00000506018 ZNF296Q8WUU4 475 aaPredicted RBP12.85□□□□□ -0.35
NR1I3-222ENST00000506018 OPTNQ96CV9 577 aa12.85□□□□□ -0.35
NR1I3-222ENST00000506018 XAGE2Q96GT9 111 aa12.85□□□□□ -0.35
NR1I3-222ENST00000506018 ABCF2Q9UG63 623 aa12.85□□□□□ -0.35
NR1I3-222ENST00000506018 DAGLAQ9Y4D2 1042 aa12.85□□□□□ -0.35
NR1I3-222ENST00000506018 FKTNO75072 461 aa12.84□□□□□ -0.35
NR1I3-222ENST00000506018 ADORA1P30542 326 aa12.84□□□□□ -0.35
NR1I3-222ENST00000506018 GTF2A2P52657 109 aa12.84□□□□□ -0.35
NR1I3-222ENST00000506018 DIXDC1Q155Q3 683 aa12.84□□□□□ -0.35
NR1I3-222ENST00000506018 FAM151AQ8WW52 585 aa12.84□□□□□ -0.35
NR1I3-222ENST00000506018 ZNF341Q9BYN7 854 aa12.84□□□□□ -0.35
NR1I3-222ENST00000506018 RASGRF1Q13972 1273 aa12.83□□□□□ -0.36
NR1I3-222ENST00000506018 VGLL4Q14135 290 aa12.83□□□□□ -0.36
NR1I3-222ENST00000506018 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.83□□□□□ -0.36
NR1I3-222ENST00000506018 ERICH6Q7L0X2 663 aa12.83□□□□□ -0.36
NR1I3-222ENST00000506018 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.83□□□□□ -0.36
NR1I3-222ENST00000506018 WRNIP1Q96S55 665 aa12.83□□□□□ -0.36
NR1I3-222ENST00000506018 USP40Q9NVE5 1235 aa12.83□□□□□ -0.36
NR1I3-222ENST00000506018 TNNQ9UQP3 1299 aa12.83□□□□□ -0.36
NR1I3-222ENST00000506018 DOCK2Q92608 1830 aa12.83□□□□□ -0.36
NR1I3-222ENST00000506018 PNMA6EA0A0J9YXQ4 647 aa12.82□□□□□ -0.36
NR1I3-222ENST00000506018 UQCRFS1P1P0C7P4 283 aa12.82□□□□□ -0.36
NR1I3-222ENST00000506018 GSTO1P78417 241 aa12.82□□□□□ -0.36
NR1I3-222ENST00000506018 CDC42EP5Q6NZY7 148 aa12.82□□□□□ -0.36
NR1I3-222ENST00000506018 ERO1BQ86YB8 467 aa12.82□□□□□ -0.36
NR1I3-222ENST00000506018 OTUD5Q96G74 571 aa12.82□□□□□ -0.36
NR1I3-222ENST00000506018 TESPA1A2RU30 521 aaPredicted RBP12.81□□□□□ -0.36
NR1I3-222ENST00000506018 SPDYE5A6NIY4 337 aa12.81□□□□□ -0.36
NR1I3-222ENST00000506018 SPDYE4A6NLX3 237 aa12.81□□□□□ -0.36
NR1I3-222ENST00000506018 LDHCP07864 332 aa12.81□□□□□ -0.36
NR1I3-222ENST00000506018 ATP8B2P98198 1209 aa12.81□□□□□ -0.36
NR1I3-222ENST00000506018 TCP10Q12799 353 aa12.81□□□□□ -0.36
NR1I3-222ENST00000506018 CCDC158Q5M9N0 1113 aa12.81□□□□□ -0.36
NR1I3-222ENST00000506018 CDAN1Q8IWY9 1227 aa12.81□□□□□ -0.36
NR1I3-222ENST00000506018 SPATA5Q8NB90 893 aa12.81□□□□□ -0.36
NR1I3-222ENST00000506018 ERO1AQ96HE7 468 aa12.81□□□□□ -0.36
NR1I3-222ENST00000506018 GPR108Q9NPR9 543 aa12.81□□□□□ -0.36
NR1I3-222ENST00000506018 CCL15-CCL14A0A0B4J2E2 113 aa12.81□□□□□ -0.36
NR1I3-222ENST00000506018 IGF2BP3O00425 579 aaKnown RBP eCLIP12.81□□□□□ -0.36
NR1I3-222ENST00000506018 ENTPD3O75355 529 aa12.81□□□□□ -0.36
NR1I3-222ENST00000506018 SURF6O75683 361 aaKnown RBP12.81□□□□□ -0.36
NR1I3-222ENST00000506018 CETPP11597 493 aa12.81□□□□□ -0.36
NR1I3-222ENST00000506018 MLLT1Q03111 559 aaPredicted RBP12.81□□□□□ -0.36
NR1I3-222ENST00000506018 ARHGEF6Q15052 776 aa12.81□□□□□ -0.36
NR1I3-222ENST00000506018 CCL15Q16663 113 aa12.81□□□□□ -0.36
NR1I3-222ENST00000506018 TTC39AQ5SRH9 613 aa12.81□□□□□ -0.36
NR1I3-222ENST00000506018 SSH3Q8TE77 659 aa12.81□□□□□ -0.36
NR1I3-222ENST00000506018 NOL10Q9BSC4 688 aaKnown RBP12.81□□□□□ -0.36
NR1I3-222ENST00000506018 ZFYVE28Q9HCC9 887 aa12.81□□□□□ -0.36
NR1I3-222ENST00000506018 GAKO14976 1311 aa12.8□□□□□ -0.36
NR1I3-222ENST00000506018 MAP4K4O95819 1239 aaPredicted RBP12.8□□□□□ -0.36
NR1I3-222ENST00000506018 ARID4AP29374 1257 aaPredicted RBP12.8□□□□□ -0.36
NR1I3-222ENST00000506018 GJA5P36382 358 aa12.8□□□□□ -0.36
NR1I3-222ENST00000506018 SNAPC2Q13487 334 aa12.8□□□□□ -0.36
NR1I3-222ENST00000506018 FBXO46Q6PJ61 603 aaPredicted RBP12.8□□□□□ -0.36
NR1I3-222ENST00000506018 MIGA2Q7L4E1 593 aa12.8□□□□□ -0.36
NR1I3-222ENST00000506018 ZSCAN29Q8IWY8 852 aaPredicted RBP12.8□□□□□ -0.36
NR1I3-222ENST00000506018 FAM163AQ96GL9 167 aaPredicted RBP12.8□□□□□ -0.36
NR1I3-222ENST00000506018 IDI2Q9BXS1 227 aa12.8□□□□□ -0.36
NR1I3-222ENST00000506018 CHMP4BQ9H444 224 aaKnown RBP12.8□□□□□ -0.36
NR1I3-222ENST00000506018 RAI14Q9P0K7 980 aa12.8□□□□□ -0.36
NR1I3-222ENST00000506018 LRP2BPQ9P2M1 347 aa12.8□□□□□ -0.36
NR1I3-222ENST00000506018 MROH7-TTC4A0A0A0MT08 1334 aa12.8□□□□□ -0.36
NR1I3-222ENST00000506018 ZBTB7BO15156 539 aaPredicted RBP12.79□□□□□ -0.36
NR1I3-222ENST00000506018 BTDP43251 543 aa12.79□□□□□ -0.36
NR1I3-222ENST00000506018 RGS19P49795 217 aa12.79□□□□□ -0.36
NR1I3-222ENST00000506018 RGS3P49796 1198 aa12.79□□□□□ -0.36
NR1I3-222ENST00000506018 MECOMQ03112 1051 aa12.79□□□□□ -0.36
NR1I3-222ENST00000506018 PPATQ06203 517 aa12.79□□□□□ -0.36
NR1I3-222ENST00000506018 NFIAQ12857 509 aa12.79□□□□□ -0.36
NR1I3-222ENST00000506018 CRHR2Q13324 411 aa12.79□□□□□ -0.36
NR1I3-222ENST00000506018 PPIL2Q13356 520 aa12.79□□□□□ -0.36
NR1I3-222ENST00000506018 TAF1CQ15572 869 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms