RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 TCEANC2Q96MN5 208 aa15.2■□□□□ 0.02
LETM1-203ENST00000505551 PLEKHA4Q9H4M7 779 aa15.2■□□□□ 0.02
LETM1-203ENST00000505551 FAM204AQ9H8W3 233 aa15.2■□□□□ 0.02
LETM1-203ENST00000505551 STRN4Q9NRL3 753 aa15.2■□□□□ 0.02
LETM1-203ENST00000505551 MAP3K2Q9Y2U5 619 aa15.2■□□□□ 0.02
LETM1-203ENST00000505551 IKBKBO14920 756 aa15.2■□□□□ 0.02
LETM1-203ENST00000505551 STK3Q13188 491 aa15.2■□□□□ 0.02
LETM1-203ENST00000505551 CASP8Q14790 479 aa15.2■□□□□ 0.02
LETM1-203ENST00000505551 TTLL5Q6EMB2 1281 aa15.2■□□□□ 0.02
LETM1-203ENST00000505551 TACO1Q9BSH4 297 aaKnown RBP15.2■□□□□ 0.02
LETM1-203ENST00000505551 HSD3B7Q9H2F3 369 aa15.2■□□□□ 0.02
LETM1-203ENST00000505551 PRDM11Q9NQV5 511 aa15.2■□□□□ 0.02
LETM1-203ENST00000505551 STRCP1A6NGW2 1772 aa15.19■□□□□ 0.02
LETM1-203ENST00000505551 PPP1R42Q7Z4L9 355 aa15.19■□□□□ 0.02
LETM1-203ENST00000505551 VSTM4Q8IW00 320 aa15.19■□□□□ 0.02
LETM1-203ENST00000505551 USP28Q96RU2 1077 aa15.19■□□□□ 0.02
LETM1-203ENST00000505551 A1CFQ9NQ94 594 aaKnown RBP15.19■□□□□ 0.02
LETM1-203ENST00000505551 SNRKQ9NRH2 765 aa15.19■□□□□ 0.02
LETM1-203ENST00000505551 BABAM1Q9NWV8 329 aa15.19■□□□□ 0.02
LETM1-203ENST00000505551 SLAIN2Q9P270 581 aa15.19■□□□□ 0.02
LETM1-203ENST00000505551 EXOC5O00471 708 aa15.19■□□□□ 0.02
LETM1-203ENST00000505551 C21orf2O43822 256 aa15.19■□□□□ 0.02
LETM1-203ENST00000505551 NLRP12P59046 1061 aa15.19■□□□□ 0.02
LETM1-203ENST00000505551 SUGCTQ9HAC7 445 aa15.19■□□□□ 0.02
LETM1-203ENST00000505551 RGPD5Q99666 1765 aa15.18■□□□□ 0.02
LETM1-203ENST00000505551 CACNA1FO60840 1977 aa15.18■□□□□ 0.02
LETM1-203ENST00000505551 CBFA2T2O43439 604 aa15.18■□□□□ 0.02
LETM1-203ENST00000505551 ZKSCAN8Q15776 578 aaPredicted RBP15.18■□□□□ 0.02
LETM1-203ENST00000505551 NAA16Q6N069 864 aaPredicted RBP15.18■□□□□ 0.02
LETM1-203ENST00000505551 MRPS27Q92552 414 aaKnown RBP15.18■□□□□ 0.02
LETM1-203ENST00000505551 SDF4Q9BRK5 362 aa15.18■□□□□ 0.02
LETM1-203ENST00000505551 SPATA31A3Q5VYP0 1347 aa15.18■□□□□ 0.02
LETM1-203ENST00000505551 MED1Q15648 1581 aaPredicted RBP15.18■□□□□ 0.02
LETM1-203ENST00000505551 CYP27B1O15528 508 aa15.18■□□□□ 0.02
LETM1-203ENST00000505551 TUBB4BP68371 445 aa15.18■□□□□ 0.02
LETM1-203ENST00000505551 TOM1L2Q6ZVM7 507 aa15.18■□□□□ 0.02
LETM1-203ENST00000505551 STAG1Q8WVM7 1258 aa15.18■□□□□ 0.02
LETM1-203ENST00000505551 CCDC102AQ96A19 550 aa15.18■□□□□ 0.02
LETM1-203ENST00000505551 MPHOSPH10O00566 681 aaKnown RBP15.17■□□□□ 0.02
LETM1-203ENST00000505551 ATP1A3P13637 1013 aa15.17■□□□□ 0.02
LETM1-203ENST00000505551 PHKG2P15735 406 aa15.17■□□□□ 0.02
LETM1-203ENST00000505551 LMOD1P29536 600 aaPredicted RBP15.17■□□□□ 0.02
LETM1-203ENST00000505551 BEND3Q5T5X7 828 aa15.17■□□□□ 0.02
LETM1-203ENST00000505551 DPF2Q92785 391 aa15.17■□□□□ 0.02
LETM1-203ENST00000505551 ACBD3Q9H3P7 528 aa15.17■□□□□ 0.02
LETM1-203ENST00000505551 DBF4Q9UBU7 674 aaPredicted RBP15.17■□□□□ 0.02
LETM1-203ENST00000505551 AARSP49588 968 aaKnown RBP eCLIP15.17■□□□□ 0.02
LETM1-203ENST00000505551 LIG3P49916 1009 aa15.17■□□□□ 0.02
LETM1-203ENST00000505551 ZNF790Q6PG37 636 aa15.17■□□□□ 0.02
LETM1-203ENST00000505551 CEP112Q8N8E3 955 aa15.17■□□□□ 0.02
LETM1-203ENST00000505551 SMARCC2Q8TAQ2 1214 aa15.17■□□□□ 0.02
LETM1-203ENST00000505551 AFAP1L1Q8TED9 768 aa15.17■□□□□ 0.02
LETM1-203ENST00000505551 ZNF396Q96N95 335 aaPredicted RBP15.17■□□□□ 0.02
LETM1-203ENST00000505551 GBP3Q9H0R5 595 aa15.17■□□□□ 0.02
LETM1-203ENST00000505551 PRPF6O94906 941 aaKnown RBP15.16■□□□□ 0.02
LETM1-203ENST00000505551 UBASH3AP57075 661 aa15.16■□□□□ 0.02
LETM1-203ENST00000505551 GOLGA8FQ08AF8 430 aa15.16■□□□□ 0.02
LETM1-203ENST00000505551 GOLGA8DPQ0D2H9 430 aa15.16■□□□□ 0.02
LETM1-203ENST00000505551 WWC2Q6AWC2 1192 aa15.16■□□□□ 0.02
LETM1-203ENST00000505551 CCDC12Q8WUD4 166 aaPredicted RBP15.16■□□□□ 0.02
LETM1-203ENST00000505551 ZNF496Q96IT1 587 aaPredicted RBP15.16■□□□□ 0.02
LETM1-203ENST00000505551 FMNL2Q96PY5 1086 aa15.16■□□□□ 0.02
LETM1-203ENST00000505551 C9orf78Q9NZ63 289 aaPredicted RBP15.16■□□□□ 0.02
LETM1-203ENST00000505551 SLIT3O75094 1523 aa15.16■□□□□ 0.02
LETM1-203ENST00000505551 A0A1W2PQ27 194 aa15.16■□□□□ 0.02
LETM1-203ENST00000505551 A0A1W2PQ64 194 aa15.16■□□□□ 0.02
LETM1-203ENST00000505551 A0A1W2PQD8 194 aa15.16■□□□□ 0.02
LETM1-203ENST00000505551 SHOX2O60902 331 aaPredicted RBP15.16■□□□□ 0.02
LETM1-203ENST00000505551 PHACTR2O75167 634 aa15.16■□□□□ 0.02
LETM1-203ENST00000505551 WDHD1O75717 1129 aaPredicted RBP15.16■□□□□ 0.02
LETM1-203ENST00000505551 ME1P48163 572 aa15.16■□□□□ 0.02
LETM1-203ENST00000505551 SKIDA1Q1XH10 827 aa15.16■□□□□ 0.02
LETM1-203ENST00000505551 CLIC6Q96NY7 704 aa15.16■□□□□ 0.02
LETM1-203ENST00000505551 ZSWIM4Q9H7M6 989 aa15.16■□□□□ 0.02
LETM1-203ENST00000505551 TAF6LQ9Y6J9 622 aa15.16■□□□□ 0.02
LETM1-203ENST00000505551 STX10O60499 249 aa15.16■□□□□ 0.02
LETM1-203ENST00000505551 RNF40O75150 1001 aa15.16■□□□□ 0.02
LETM1-203ENST00000505551 TOGARAM2Q6ZUX3 1019 aa15.16■□□□□ 0.02
LETM1-203ENST00000505551 SLC52A2Q9HAB3 445 aa15.16■□□□□ 0.02
LETM1-203ENST00000505551 CDC23Q9UJX2 597 aa15.16■□□□□ 0.02
LETM1-203ENST00000505551 JCADQ9P266 1359 aa15.15■□□□□ 0.02
LETM1-203ENST00000505551 TOP1P11387 765 aaKnown RBP15.15■□□□□ 0.02
LETM1-203ENST00000505551 VSNL1P62760 191 aa15.15■□□□□ 0.02
LETM1-203ENST00000505551 TBX2Q13207 712 aaPredicted RBP15.15■□□□□ 0.02
LETM1-203ENST00000505551 FBXW10Q5XX13 1052 aa15.15■□□□□ 0.02
LETM1-203ENST00000505551 BAG1Q99933 345 aaPredicted RBP15.15■□□□□ 0.02
LETM1-203ENST00000505551 VIPAS39Q9H9C1 493 aa15.15■□□□□ 0.02
LETM1-203ENST00000505551 LRRIQ3A6PVS8 624 aaPredicted RBP15.15■□□□□ 0.02
LETM1-203ENST00000505551 TUBBP07437 444 aa15.15■□□□□ 0.02
LETM1-203ENST00000505551 PPP2R5AQ15172 486 aa15.15■□□□□ 0.02
LETM1-203ENST00000505551 ADALQ6DHV7 355 aa15.15■□□□□ 0.02
LETM1-203ENST00000505551 IFNL2Q8IZJ0 200 aa15.15■□□□□ 0.02
LETM1-203ENST00000505551 EVI5LQ96CN4 794 aa15.15■□□□□ 0.02
LETM1-203ENST00000505551 PCDHA7Q9UN72 937 aa15.15■□□□□ 0.02
LETM1-203ENST00000505551 USP54Q70EL1 1684 aa15.14■□□□□ 0.01
LETM1-203ENST00000505551 MEGF6O75095 1541 aa15.14■□□□□ 0.01
LETM1-203ENST00000505551 PPP1R12AO14974 1030 aaPredicted RBP15.14■□□□□ 0.01
LETM1-203ENST00000505551 NDUFA8P51970 172 aa15.14■□□□□ 0.01
LETM1-203ENST00000505551 TUBB2AQ13885 445 aa15.14■□□□□ 0.01
LETM1-203ENST00000505551 POTEDQ86YR6 584 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms