RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 SPOCK2Q92563 424 aa12.36□□□□□ -0.43
RFC1-210ENST00000505077 MXD3Q9BW11 206 aa12.36□□□□□ -0.43
RFC1-210ENST00000505077 H7C1D1 291 aa12.35□□□□□ -0.43
RFC1-210ENST00000505077 CYP7A1P22680 504 aa12.35□□□□□ -0.43
RFC1-210ENST00000505077 CHMLP26374 656 aa12.35□□□□□ -0.43
RFC1-210ENST00000505077 CRKP46108 304 aa12.35□□□□□ -0.43
RFC1-210ENST00000505077 SCNN1DP51172 638 aa12.35□□□□□ -0.43
RFC1-210ENST00000505077 DIXDC1Q155Q3 683 aa12.35□□□□□ -0.43
RFC1-210ENST00000505077 GRIK5Q16478 980 aa12.35□□□□□ -0.43
RFC1-210ENST00000505077 ZBTB12Q9Y330 459 aaPredicted RBP12.35□□□□□ -0.43
RFC1-210ENST00000505077 DAGLAQ9Y4D2 1042 aa12.35□□□□□ -0.43
RFC1-210ENST00000505077 TRPM7Q96QT4 1865 aa12.35□□□□□ -0.43
RFC1-210ENST00000505077 COL2A1P02458 1487 aaPredicted RBP12.34□□□□□ -0.43
RFC1-210ENST00000505077 RPAP1Q9BWH6 1393 aaPredicted RBP12.34□□□□□ -0.43
RFC1-210ENST00000505077 GPR75-ASB3A0A0A6YYF3 556 aa12.34□□□□□ -0.43
RFC1-210ENST00000505077 F8W031 263 aaPredicted RBP12.34□□□□□ -0.43
RFC1-210ENST00000505077 PPP4CP60510 307 aa12.34□□□□□ -0.43
RFC1-210ENST00000505077 MICALL2Q8IY33 904 aa12.34□□□□□ -0.43
RFC1-210ENST00000505077 AIDAQ96BJ3 306 aa12.34□□□□□ -0.43
RFC1-210ENST00000505077 MYOZ2Q9NPC6 264 aa12.34□□□□□ -0.43
RFC1-210ENST00000505077 CNOT7Q9UIV1 285 aaKnown RBP12.34□□□□□ -0.43
RFC1-210ENST00000505077 SIPA1L1O43166 1804 aa12.33□□□□□ -0.44
RFC1-210ENST00000505077 A0A0D9SFI3 127 aa12.33□□□□□ -0.44
RFC1-210ENST00000505077 MAGEB6P1A0A0J9YX57 407 aa12.33□□□□□ -0.44
RFC1-210ENST00000505077 SPDYE2BA6NHP3 402 aa12.33□□□□□ -0.44
RFC1-210ENST00000505077 MYO1BO43795 1136 aa12.33□□□□□ -0.44
RFC1-210ENST00000505077 DDNO94850 711 aaPredicted RBP12.33□□□□□ -0.44
RFC1-210ENST00000505077 SPDYE6P0CI01 402 aa12.33□□□□□ -0.44
RFC1-210ENST00000505077 GNAT2P19087 354 aa12.33□□□□□ -0.44
RFC1-210ENST00000505077 NMIQ13287 307 aaPredicted RBP12.33□□□□□ -0.44
RFC1-210ENST00000505077 DLGAP5Q15398 846 aa12.33□□□□□ -0.44
RFC1-210ENST00000505077 CFAP100Q494V2 611 aa12.33□□□□□ -0.44
RFC1-210ENST00000505077 MCMDC2Q4G0Z9 681 aa12.33□□□□□ -0.44
RFC1-210ENST00000505077 ADGRA1Q86SQ6 560 aa12.33□□□□□ -0.44
RFC1-210ENST00000505077 ZBED3Q96IU2 234 aaPredicted RBP12.33□□□□□ -0.44
RFC1-210ENST00000505077 ADARB2Q9NS39 739 aaKnown RBP12.33□□□□□ -0.44
RFC1-210ENST00000505077 HACL1Q9UJ83 578 aa12.33□□□□□ -0.44
RFC1-210ENST00000505077 ZMYM6O95789 1325 aa12.33□□□□□ -0.44
RFC1-210ENST00000505077 CCDC171Q6TFL3 1326 aa12.33□□□□□ -0.44
RFC1-210ENST00000505077 ATAD5Q96QE3 1844 aa12.32□□□□□ -0.44
RFC1-210ENST00000505077 SGSM2O43147 1006 aa12.32□□□□□ -0.44
RFC1-210ENST00000505077 GPAA1O43292 621 aa12.32□□□□□ -0.44
RFC1-210ENST00000505077 EPB41L2O43491 1005 aaKnown RBP12.32□□□□□ -0.44
RFC1-210ENST00000505077 BTDP43251 543 aa12.32□□□□□ -0.44
RFC1-210ENST00000505077 RBM5P52756 815 aaKnown RBP eCLIP12.32□□□□□ -0.44
RFC1-210ENST00000505077 KIF4BQ2VIQ3 1234 aa12.32□□□□□ -0.44
RFC1-210ENST00000505077 FKBP1CQ5VVH2 108 aa12.32□□□□□ -0.44
RFC1-210ENST00000505077 CWC27Q6UX04 472 aaKnown RBP12.32□□□□□ -0.44
RFC1-210ENST00000505077 FAM227BQ96M60 508 aa12.32□□□□□ -0.44
RFC1-210ENST00000505077 RIOK1Q9BRS2 568 aaKnown RBP12.32□□□□□ -0.44
RFC1-210ENST00000505077 ESYT1Q9BSJ8 1104 aa12.32□□□□□ -0.44
RFC1-210ENST00000505077 CRNKL1Q9BZJ0 848 aaKnown RBP12.32□□□□□ -0.44
RFC1-210ENST00000505077 AATFQ9NY61 560 aaKnown RBP eCLIP12.32□□□□□ -0.44
RFC1-210ENST00000505077 REC8O95072 547 aa12.31□□□□□ -0.44
RFC1-210ENST00000505077 MBD4O95243 580 aa12.31□□□□□ -0.44
RFC1-210ENST00000505077 SPDYE2Q495Y8 402 aa12.31□□□□□ -0.44
RFC1-210ENST00000505077 APOBEC3HQ6NTF7 200 aaKnown RBP12.31□□□□□ -0.44
RFC1-210ENST00000505077 USP50Q70EL3 339 aaPredicted RBP12.31□□□□□ -0.44
RFC1-210ENST00000505077 PNMA8AQ86V59 439 aaPredicted RBP12.31□□□□□ -0.44
RFC1-210ENST00000505077 OSBP2Q969R2 916 aa12.31□□□□□ -0.44
RFC1-210ENST00000505077 PUS7LQ9H0K6 701 aaKnown RBP12.31□□□□□ -0.44
RFC1-210ENST00000505077 TMOD2Q9NZR1 351 aa12.31□□□□□ -0.44
RFC1-210ENST00000505077 PITPNM2Q9BZ72 1349 aa12.31□□□□□ -0.44
RFC1-210ENST00000505077 M0R2C6 588 aa12.3□□□□□ -0.44
RFC1-210ENST00000505077 WNT10BO00744 389 aa12.3□□□□□ -0.44
RFC1-210ENST00000505077 EPHX2P34913 555 aa12.3□□□□□ -0.44
RFC1-210ENST00000505077 TNFAIP1Q13829 316 aa12.3□□□□□ -0.44
RFC1-210ENST00000505077 GIMAP6Q6P9H5 292 aa12.3□□□□□ -0.44
RFC1-210ENST00000505077 MIGA1Q8NAN2 632 aa12.3□□□□□ -0.44
RFC1-210ENST00000505077 ZC3H15Q8WU90 426 aaKnown RBP12.3□□□□□ -0.44
RFC1-210ENST00000505077 DDRGK1Q96HY6 314 aa12.3□□□□□ -0.44
RFC1-210ENST00000505077 ATP8A2Q9NTI2 1148 aa12.3□□□□□ -0.44
RFC1-210ENST00000505077 VEGFAP15692 232 aaPredicted RBP12.29□□□□□ -0.44
RFC1-210ENST00000505077 EPS15P42566 896 aa12.29□□□□□ -0.44
RFC1-210ENST00000505077 RHBDL3P58872 404 aa12.29□□□□□ -0.44
RFC1-210ENST00000505077 KIAA1211Q6ZU35 1233 aa12.29□□□□□ -0.44
RFC1-210ENST00000505077 APOBEC3FQ8IUX4 373 aaKnown RBP12.29□□□□□ -0.44
RFC1-210ENST00000505077 TEX11Q8IYF3 940 aa12.29□□□□□ -0.44
RFC1-210ENST00000505077 LCORLQ8N3X6 602 aa12.29□□□□□ -0.44
RFC1-210ENST00000505077 SPRYD3Q8NCJ5 442 aa12.29□□□□□ -0.44
RFC1-210ENST00000505077 PRMT6Q96LA8 375 aaPredicted RBP12.29□□□□□ -0.44
RFC1-210ENST00000505077 STRBPQ96SI9 672 aaKnown RBP12.29□□□□□ -0.44
RFC1-210ENST00000505077 DSCC1Q9BVC3 393 aa12.29□□□□□ -0.44
RFC1-210ENST00000505077 IDI2Q9BXS1 227 aa12.29□□□□□ -0.44
RFC1-210ENST00000505077 NACAP1Q9BZK3 213 aa12.29□□□□□ -0.44
RFC1-210ENST00000505077 ARMT1Q9H993 441 aa12.29□□□□□ -0.44
RFC1-210ENST00000505077 PAPPA2Q9BXP8 1791 aa12.28□□□□□ -0.44
RFC1-210ENST00000505077 DOCK1Q14185 1865 aa12.28□□□□□ -0.44
RFC1-210ENST00000505077 SHTN1A0MZ66 631 aa12.28□□□□□ -0.44
RFC1-210ENST00000505077 CHGBP05060 677 aa12.28□□□□□ -0.44
RFC1-210ENST00000505077 C8orf34Q49A92 452 aa12.28□□□□□ -0.44
RFC1-210ENST00000505077 TBC1D10BQ4KMP7 808 aaPredicted RBP12.28□□□□□ -0.44
RFC1-210ENST00000505077 CDC42EP5Q6NZY7 148 aa12.28□□□□□ -0.44
RFC1-210ENST00000505077 SAMD7Q7Z3H4 446 aa12.28□□□□□ -0.44
RFC1-210ENST00000505077 ZNF589Q86UQ0 364 aaPredicted RBP12.28□□□□□ -0.44
RFC1-210ENST00000505077 FAM83AQ86UY5 434 aa12.28□□□□□ -0.44
RFC1-210ENST00000505077 TRPM4Q8TD43 1214 aa12.28□□□□□ -0.44
RFC1-210ENST00000505077 SH3RF3Q8TEJ3 882 aaPredicted RBP12.28□□□□□ -0.44
RFC1-210ENST00000505077 SEC62Q99442 399 aaKnown RBP12.28□□□□□ -0.44
RFC1-210ENST00000505077 TAF1DQ9H5J8 278 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms