RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 TSHZ3Q63HK5 1081 aa10.06□□□□□ -0.8
CDC42SE2-208ENST00000505065 BOLA2Q9H3K6 86 aa10.06□□□□□ -0.8
CDC42SE2-208ENST00000505065 PCDHAC2Q9Y5I4 1007 aa10.06□□□□□ -0.8
CDC42SE2-208ENST00000505065 ENTPD3O75355 529 aa10.06□□□□□ -0.8
CDC42SE2-208ENST00000505065 SBK1Q52WX2 424 aa10.06□□□□□ -0.8
CDC42SE2-208ENST00000505065 CDC42EP5Q6NZY7 148 aa10.06□□□□□ -0.8
CDC42SE2-208ENST00000505065 RBM46Q8TBY0 533 aaKnown RBP10.06□□□□□ -0.8
CDC42SE2-208ENST00000505065 OSBP2Q969R2 916 aa10.06□□□□□ -0.8
CDC42SE2-208ENST00000505065 STRBPQ96SI9 672 aaKnown RBP10.06□□□□□ -0.8
CDC42SE2-208ENST00000505065 ZNF112Q9UJU3 913 aa10.06□□□□□ -0.8
CDC42SE2-208ENST00000505065 M0R2C6 588 aa10.05□□□□□ -0.8
CDC42SE2-208ENST00000505065 EPHX2P34913 555 aa10.05□□□□□ -0.8
CDC42SE2-208ENST00000505065 PNMA8AQ86V59 439 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE2-208ENST00000505065 EHD4Q9H223 541 aa10.05□□□□□ -0.8
CDC42SE2-208ENST00000505065 GABPAQ06546 454 aa10.05□□□□□ -0.8
CDC42SE2-208ENST00000505065 TBC1D9Q6ZT07 1266 aa10.05□□□□□ -0.8
CDC42SE2-208ENST00000505065 SH3BP5LQ7L8J4 393 aa10.05□□□□□ -0.8
CDC42SE2-208ENST00000505065 LDHDQ86WU2 507 aa10.05□□□□□ -0.8
CDC42SE2-208ENST00000505065 SLF2Q8IX21 1173 aa10.05□□□□□ -0.8
CDC42SE2-208ENST00000505065 PRMT6Q96LA8 375 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE2-208ENST00000505065 ZNF532Q9HCE3 1301 aa10.05□□□□□ -0.8
CDC42SE2-208ENST00000505065 GOLIM4O00461 696 aa10.05□□□□□ -0.8
CDC42SE2-208ENST00000505065 CFAP100Q494V2 611 aa10.05□□□□□ -0.8
CDC42SE2-208ENST00000505065 ZSCAN25Q6NSZ9 544 aa10.05□□□□□ -0.8
CDC42SE2-208ENST00000505065 TEKT1Q969V4 418 aa10.05□□□□□ -0.8
CDC42SE2-208ENST00000505065 NDUFB9Q9Y6M9 179 aa10.05□□□□□ -0.8
CDC42SE2-208ENST00000505065 NT5C2P49902 561 aa10.05□□□□□ -0.8
CDC42SE2-208ENST00000505065 KIF4BQ2VIQ3 1234 aa10.05□□□□□ -0.8
CDC42SE2-208ENST00000505065 DPY19L2Q6NUT2 758 aa10.05□□□□□ -0.8
CDC42SE2-208ENST00000505065 CNTROBQ8N137 903 aa10.05□□□□□ -0.8
CDC42SE2-208ENST00000505065 PUS7LQ9H0K6 701 aaKnown RBP10.05□□□□□ -0.8
CDC42SE2-208ENST00000505065 TTF2Q9UNY4 1162 aaKnown RBP10.05□□□□□ -0.8
CDC42SE2-208ENST00000505065 ZNF236Q9UL36 1845 aa10.04□□□□□ -0.8
CDC42SE2-208ENST00000505065 HIP1O00291 1037 aa10.04□□□□□ -0.8
CDC42SE2-208ENST00000505065 CHGBP05060 677 aa10.04□□□□□ -0.8
CDC42SE2-208ENST00000505065 ZNF70Q9UC06 446 aaPredicted RBP10.04□□□□□ -0.8
CDC42SE2-208ENST00000505065 MAP3K12Q12852 859 aa10.04□□□□□ -0.8
CDC42SE2-208ENST00000505065 A0A0D9SFI3 127 aa10.03□□□□□ -0.8
CDC42SE2-208ENST00000505065 SGSM2O43147 1006 aa10.03□□□□□ -0.8
CDC42SE2-208ENST00000505065 VEGFAP15692 232 aaPredicted RBP10.03□□□□□ -0.8
CDC42SE2-208ENST00000505065 VPS37DQ86XT2 251 aa10.03□□□□□ -0.8
CDC42SE2-208ENST00000505065 EPB41L4AQ9HCS5 686 aaPredicted RBP10.03□□□□□ -0.8
CDC42SE2-208ENST00000505065 DDX4Q9NQI0 724 aaKnown RBP10.03□□□□□ -0.8
CDC42SE2-208ENST00000505065 MGAMO43451 1857 aa10.03□□□□□ -0.8
CDC42SE2-208ENST00000505065 FSTL1Q12841 308 aa10.03□□□□□ -0.8
CDC42SE2-208ENST00000505065 TSGA10IPQ3SY00 556 aa10.03□□□□□ -0.8
CDC42SE2-208ENST00000505065 ZNF784Q8NCA9 323 aaPredicted RBP10.03□□□□□ -0.8
CDC42SE2-208ENST00000505065 NBPF3Q9H094 633 aa10.03□□□□□ -0.8
CDC42SE2-208ENST00000505065 FLT1P17948 1338 aa10.03□□□□□ -0.8
CDC42SE2-208ENST00000505065 GSG1L2A8MUP6 293 aa10.03□□□□□ -0.8
CDC42SE2-208ENST00000505065 C8orf34Q49A92 452 aa10.03□□□□□ -0.8
CDC42SE2-208ENST00000505065 SKAP1Q86WV1 359 aa10.03□□□□□ -0.8
CDC42SE2-208ENST00000505065 APOBEC3FQ8IUX4 373 aaKnown RBP10.03□□□□□ -0.8
CDC42SE2-208ENST00000505065 DSCC1Q9BVC3 393 aa10.03□□□□□ -0.8
CDC42SE2-208ENST00000505065 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.03□□□□□ -0.8
CDC42SE2-208ENST00000505065 HDAC9Q9UKV0 1011 aa10.03□□□□□ -0.8
CDC42SE2-208ENST00000505065 IQSEC3Q9UPP2 1182 aaPredicted RBP10.03□□□□□ -0.8
CDC42SE2-208ENST00000505065 ASTN2O75129 1339 aaPredicted RBP10.03□□□□□ -0.8
CDC42SE2-208ENST00000505065 PLXNB2O15031 1838 aa10.03□□□□□ -0.8
CDC42SE2-208ENST00000505065 LDHCP07864 332 aa10.03□□□□□ -0.8
CDC42SE2-208ENST00000505065 DIXDC1Q155Q3 683 aa10.03□□□□□ -0.8
CDC42SE2-208ENST00000505065 NBPF9Q3BBW0 867 aa10.03□□□□□ -0.8
CDC42SE2-208ENST00000505065 MAGEB6Q8N7X4 407 aa10.03□□□□□ -0.8
CDC42SE2-208ENST00000505065 LRRC37A2A6NM11 1700 aa10.02□□□□□ -0.8
CDC42SE2-208ENST00000505065 PLCG2P16885 1265 aa10.02□□□□□ -0.81
CDC42SE2-208ENST00000505065 FAM151AQ8WW52 585 aa10.02□□□□□ -0.81
CDC42SE2-208ENST00000505065 LSG1Q9H089 658 aaKnown RBP10.02□□□□□ -0.81
CDC42SE2-208ENST00000505065 COL11A1P12107 1806 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE2-208ENST00000505065 GNAT2P19087 354 aa10.02□□□□□ -0.81
CDC42SE2-208ENST00000505065 BTDP43251 543 aa10.02□□□□□ -0.81
CDC42SE2-208ENST00000505065 NOL9Q5SY16 702 aaKnown RBP10.02□□□□□ -0.81
CDC42SE2-208ENST00000505065 NAA16Q6N069 864 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE2-208ENST00000505065 TATDN1Q6P1N9 297 aa10.02□□□□□ -0.81
CDC42SE2-208ENST00000505065 LCORLQ8N3X6 602 aa10.02□□□□□ -0.81
CDC42SE2-208ENST00000505065 SH3RF3Q8TEJ3 882 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE2-208ENST00000505065 HHIPL1Q96JK4 782 aa10.02□□□□□ -0.81
CDC42SE2-208ENST00000505065 ATP8A2Q9NTI2 1148 aa10.02□□□□□ -0.81
CDC42SE2-208ENST00000505065 PHF20L1A8MW92 1017 aa10.02□□□□□ -0.81
CDC42SE2-208ENST00000505065 OSBPL5Q9H0X9 879 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE2-208ENST00000505065 TACC3Q9Y6A5 838 aa10.02□□□□□ -0.81
CDC42SE2-208ENST00000505065 APBB1O00213 710 aa10.01□□□□□ -0.81
CDC42SE2-208ENST00000505065 NMIQ13287 307 aaPredicted RBP10.01□□□□□ -0.81
CDC42SE2-208ENST00000505065 SLC9C2Q5TAH2 1124 aa10.01□□□□□ -0.81
CDC42SE2-208ENST00000505065 ZNF589Q86UQ0 364 aaPredicted RBP10.01□□□□□ -0.81
CDC42SE2-208ENST00000505065 KIAA0825Q8IV33 1275 aa10.01□□□□□ -0.81
CDC42SE2-208ENST00000505065 NMRK2Q9NPI5 230 aa10.01□□□□□ -0.81
CDC42SE2-208ENST00000505065 CCDC171Q6TFL3 1326 aa10.01□□□□□ -0.81
CDC42SE2-208ENST00000505065 LRRFIP1Q32MZ4 808 aaKnown RBP10.01□□□□□ -0.81
CDC42SE2-208ENST00000505065 MCMDC2Q4G0Z9 681 aa10.01□□□□□ -0.81
CDC42SE2-208ENST00000505065 GORABQ5T7V8 394 aa10.01□□□□□ -0.81
CDC42SE2-208ENST00000505065 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.01□□□□□ -0.81
CDC42SE2-208ENST00000505065 GTF3C3Q9Y5Q9 886 aa10.01□□□□□ -0.81
CDC42SE2-208ENST00000505065 LCTP09848 1927 aa10.01□□□□□ -0.81
CDC42SE2-208ENST00000505065 SLFNL1Q499Z3 407 aa10.01□□□□□ -0.81
CDC42SE2-208ENST00000505065 SAMD7Q7Z3H4 446 aa10.01□□□□□ -0.81
CDC42SE2-208ENST00000505065 MAP4K1Q92918 833 aa10.01□□□□□ -0.81
CDC42SE2-208ENST00000505065 ESYT1Q9BSJ8 1104 aa10.01□□□□□ -0.81
CDC42SE2-208ENST00000505065 DCAF8L1A6NGE4 600 aa10□□□□□ -0.81
CDC42SE2-208ENST00000505065 H7C1D1 291 aa10□□□□□ -0.81
CDC42SE2-208ENST00000505065 FAM227BQ96M60 508 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms