RNA–Protein interactions for RNA: ENST00000504959.5

SNX25-203, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 1,868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-203ENST00000504959 TTC21BQ7Z4L5 1316 aa7.09□□□□□ -1.27
SNX25-203ENST00000504959 RLBP1P12271 317 aa7.09□□□□□ -1.27
SNX25-203ENST00000504959 CCDC74AQ96AQ1 378 aa7.09□□□□□ -1.27
SNX25-203ENST00000504959 COPRSQ9NQ92 184 aa7.09□□□□□ -1.27
SNX25-203ENST00000504959 TNNQ9UQP3 1299 aa7.09□□□□□ -1.27
SNX25-203ENST00000504959 FMN2Q9NZ56 1722 aa7.09□□□□□ -1.27
SNX25-203ENST00000504959 KIF16BQ96L93 1317 aa7.09□□□□□ -1.28
SNX25-203ENST00000504959 GNAI1P63096 354 aa7.09□□□□□ -1.28
SNX25-203ENST00000504959 PAK2Q13177 524 aa7.09□□□□□ -1.28
SNX25-203ENST00000504959 BMS1Q14692 1282 aaKnown RBP7.09□□□□□ -1.28
SNX25-203ENST00000504959 EGFLAMQ63HQ2 1017 aa7.09□□□□□ -1.28
SNX25-203ENST00000504959 ITPRIPQ8IWB1 547 aa7.09□□□□□ -1.28
SNX25-203ENST00000504959 SSH1Q8WYL5 1049 aa7.09□□□□□ -1.28
SNX25-203ENST00000504959 PHACTR3Q96KR7 559 aa7.09□□□□□ -1.28
SNX25-203ENST00000504959 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.09□□□□□ -1.28
SNX25-203ENST00000504959 OSBPL2Q9H1P3 480 aa7.09□□□□□ -1.28
SNX25-203ENST00000504959 NOB1Q9ULX3 412 aaKnown RBP7.09□□□□□ -1.28
SNX25-203ENST00000504959 USP20Q9Y2K6 914 aa7.09□□□□□ -1.28
SNX25-203ENST00000504959 ARHGAP23Q9P227 1491 aa7.08□□□□□ -1.28
SNX25-203ENST00000504959 PTPRUQ92729 1446 aa7.08□□□□□ -1.28
SNX25-203ENST00000504959 NALCNQ8IZF0 1738 aa7.08□□□□□ -1.28
SNX25-203ENST00000504959 TNFRSF10AO00220 468 aa7.08□□□□□ -1.28
SNX25-203ENST00000504959 MEN1O00255 615 aa7.08□□□□□ -1.28
SNX25-203ENST00000504959 TNFRSF21O75509 655 aa7.08□□□□□ -1.28
SNX25-203ENST00000504959 ATF4P18848 351 aaPredicted RBP7.08□□□□□ -1.28
SNX25-203ENST00000504959 ALDH1L2Q3SY69 923 aa7.08□□□□□ -1.28
SNX25-203ENST00000504959 ATF7IPQ6VMQ6 1270 aa7.08□□□□□ -1.28
SNX25-203ENST00000504959 JAZF1Q86VZ6 243 aa7.08□□□□□ -1.28
SNX25-203ENST00000504959 TTC16Q8NEE8 873 aa7.08□□□□□ -1.28
SNX25-203ENST00000504959 NGDNQ8NEJ9 315 aaKnown RBP7.08□□□□□ -1.28
SNX25-203ENST00000504959 DDX19BQ9UMR2 479 aa7.08□□□□□ -1.28
SNX25-203ENST00000504959 USP6P35125 1406 aa7.08□□□□□ -1.28
SNX25-203ENST00000504959 STK10O94804 968 aaKnown RBP7.07□□□□□ -1.28
SNX25-203ENST00000504959 MICAL2O94851 1124 aa7.07□□□□□ -1.28
SNX25-203ENST00000504959 TRIM27P14373 513 aa7.07□□□□□ -1.28
SNX25-203ENST00000504959 RPIAP49247 311 aa7.07□□□□□ -1.28
SNX25-203ENST00000504959 TAF1CQ15572 869 aaPredicted RBP7.07□□□□□ -1.28
SNX25-203ENST00000504959 VPS37DQ86XT2 251 aa7.07□□□□□ -1.28
SNX25-203ENST00000504959 AGBL1Q96MI9 1066 aa7.07□□□□□ -1.28
SNX25-203ENST00000504959 NIFKQ9BYG3 293 aaKnown RBP7.07□□□□□ -1.28
SNX25-203ENST00000504959 PTCH1Q13635 1447 aa7.07□□□□□ -1.28
SNX25-203ENST00000504959 SETD1BQ9UPS6 1966 aaKnown RBP7.07□□□□□ -1.28
SNX25-203ENST00000504959 TTC21AQ8NDW8 1320 aa7.07□□□□□ -1.28
SNX25-203ENST00000504959 FAM187AA6NFU0 413 aa7.07□□□□□ -1.28
SNX25-203ENST00000504959 USP17L7P0C7H9 530 aa7.07□□□□□ -1.28
SNX25-203ENST00000504959 C1orf53Q5VUE5 145 aa7.07□□□□□ -1.28
SNX25-203ENST00000504959 ERMP1Q7Z2K6 904 aa7.07□□□□□ -1.28
SNX25-203ENST00000504959 IFT57Q9NWB7 429 aa7.07□□□□□ -1.28
SNX25-203ENST00000504959 PKD2L1Q9P0L9 805 aa7.07□□□□□ -1.28
SNX25-203ENST00000504959 CEP170BQ9Y4F5 1589 aaPredicted RBP7.06□□□□□ -1.28
SNX25-203ENST00000504959 EIF4A2Q14240 407 aaKnown RBP7.06□□□□□ -1.28
SNX25-203ENST00000504959 TCEAL1Q15170 157 aa7.06□□□□□ -1.28
SNX25-203ENST00000504959 TRIP4Q15650 581 aaPredicted RBP7.06□□□□□ -1.28
SNX25-203ENST00000504959 SULT6B1Q6IMI4 303 aa7.06□□□□□ -1.28
SNX25-203ENST00000504959 ZNF746Q6NUN9 644 aaPredicted RBP7.06□□□□□ -1.28
SNX25-203ENST00000504959 ZNF280CQ8ND82 737 aa7.06□□□□□ -1.28
SNX25-203ENST00000504959 C7orf43Q8WVR3 580 aa7.06□□□□□ -1.28
SNX25-203ENST00000504959 GPRASP2Q96D09 838 aa7.06□□□□□ -1.28
SNX25-203ENST00000504959 GPATCH3Q96I76 525 aa7.06□□□□□ -1.28
SNX25-203ENST00000504959 MRGPRX2Q96LB1 330 aa7.06□□□□□ -1.28
SNX25-203ENST00000504959 ZSCAN10Q96SZ4 725 aaPredicted RBP7.06□□□□□ -1.28
SNX25-203ENST00000504959 THUMPD2Q9BTF0 503 aaKnown RBP7.06□□□□□ -1.28
SNX25-203ENST00000504959 CHMP4BQ9H444 224 aaKnown RBP7.06□□□□□ -1.28
SNX25-203ENST00000504959 NPHS2Q9NP85 383 aa7.06□□□□□ -1.28
SNX25-203ENST00000504959 FAM8A1Q9UBU6 413 aa7.06□□□□□ -1.28
SNX25-203ENST00000504959 DMGDHQ9UI17 866 aaKnown RBP7.06□□□□□ -1.28
SNX25-203ENST00000504959 XRN1Q8IZH2 1706 aaKnown RBP7.06□□□□□ -1.28
SNX25-203ENST00000504959 OVOS2A0A0J9YW53 1432 aa7.05□□□□□ -1.28
SNX25-203ENST00000504959 CD2BP2O95400 341 aaKnown RBP7.05□□□□□ -1.28
SNX25-203ENST00000504959 OVOS2Q6IE36 1432 aa7.05□□□□□ -1.28
SNX25-203ENST00000504959 NXPE4Q6UWF7 544 aa7.05□□□□□ -1.28
SNX25-203ENST00000504959 SPACA7Q96KW9 195 aa7.05□□□□□ -1.28
SNX25-203ENST00000504959 PEAK1Q9H792 1746 aa7.05□□□□□ -1.28
SNX25-203ENST00000504959 CHD2O14647 1828 aaKnown RBP7.05□□□□□ -1.28
SNX25-203ENST00000504959 TGFBR3LH3BV60 316 aa7.04□□□□□ -1.28
SNX25-203ENST00000504959 ELL2O00472 640 aaPredicted RBP7.04□□□□□ -1.28
SNX25-203ENST00000504959 PTGIRP43119 386 aa7.04□□□□□ -1.28
SNX25-203ENST00000504959 AMPHP49418 695 aa7.04□□□□□ -1.28
SNX25-203ENST00000504959 ST13P50502 369 aaKnown RBP7.04□□□□□ -1.28
SNX25-203ENST00000504959 TWISTNBQ3B726 338 aaPredicted RBP7.04□□□□□ -1.28
SNX25-203ENST00000504959 SOGA3Q5TF21 947 aa7.04□□□□□ -1.28
SNX25-203ENST00000504959 TMEM214Q6NUQ4 689 aaKnown RBP7.04□□□□□ -1.28
SNX25-203ENST00000504959 TMEM57Q8N5G2 664 aa7.04□□□□□ -1.28
SNX25-203ENST00000504959 RHBDD1Q8TEB9 315 aa7.04□□□□□ -1.28
SNX25-203ENST00000504959 HSH2DQ96JZ2 352 aa7.04□□□□□ -1.28
SNX25-203ENST00000504959 NLRP3Q96P20 1036 aa7.04□□□□□ -1.28
SNX25-203ENST00000504959 ZNF395Q9H8N7 513 aaPredicted RBP7.04□□□□□ -1.28
SNX25-203ENST00000504959 CWC22Q9HCG8 908 aaKnown RBP7.04□□□□□ -1.28
SNX25-203ENST00000504959 MBIPQ9NS73 344 aa7.04□□□□□ -1.28
SNX25-203ENST00000504959 MRPL42Q9Y6G3 142 aaKnown RBP7.04□□□□□ -1.28
SNX25-203ENST00000504959 ZNF142P52746 1687 aaPredicted RBP7.04□□□□□ -1.28
SNX25-203ENST00000504959 FAM83GA6ND36 823 aa7.04□□□□□ -1.28
SNX25-203ENST00000504959 VAMP4O75379 141 aa7.04□□□□□ -1.28
SNX25-203ENST00000504959 RPLP1P05386 114 aaKnown RBP7.04□□□□□ -1.28
SNX25-203ENST00000504959 POLR3DP05423 398 aaPredicted RBP7.04□□□□□ -1.28
SNX25-203ENST00000504959 PLA2G4AP47712 749 aa7.04□□□□□ -1.28
SNX25-203ENST00000504959 RELBQ01201 579 aa7.04□□□□□ -1.28
SNX25-203ENST00000504959 HSP90AB2PQ58FF8 381 aa7.04□□□□□ -1.28
SNX25-203ENST00000504959 Q6ZVU0 165 aa7.04□□□□□ -1.28
SNX25-203ENST00000504959 ANKLE2Q86XL3 938 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms