RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 NDUFB9Q9Y6M9 179 aa14.48□□□□□ -0.09
PDLIM5-208ENST00000504489 MYH1P12882 1939 aa14.48□□□□□ -0.09
PDLIM5-208ENST00000504489 AOX1Q06278 1338 aa14.47□□□□□ -0.09
PDLIM5-208ENST00000504489 GOLIM4O00461 696 aa14.47□□□□□ -0.09
PDLIM5-208ENST00000504489 RBM5P52756 815 aaKnown RBP eCLIP14.47□□□□□ -0.09
PDLIM5-208ENST00000504489 GSTO1P78417 241 aa14.47□□□□□ -0.09
PDLIM5-208ENST00000504489 MECOMQ03112 1051 aa14.47□□□□□ -0.09
PDLIM5-208ENST00000504489 NBPF9Q3BBW0 867 aa14.47□□□□□ -0.09
PDLIM5-208ENST00000504489 TSHZ3Q63HK5 1081 aa14.47□□□□□ -0.09
PDLIM5-208ENST00000504489 TMED8Q6PL24 325 aaPredicted RBP14.47□□□□□ -0.09
PDLIM5-208ENST00000504489 PLEKHM2Q8IWE5 1019 aa14.47□□□□□ -0.09
PDLIM5-208ENST00000504489 NSUN4Q96CB9 384 aaKnown RBP14.47□□□□□ -0.09
PDLIM5-208ENST00000504489 PRMT6Q96LA8 375 aaPredicted RBP14.47□□□□□ -0.09
PDLIM5-208ENST00000504489 DNAJC2Q99543 621 aaKnown RBP14.47□□□□□ -0.09
PDLIM5-208ENST00000504489 OSBPL3Q9H4L5 887 aa14.47□□□□□ -0.09
PDLIM5-208ENST00000504489 PAG1Q9NWQ8 432 aa14.47□□□□□ -0.09
PDLIM5-208ENST00000504489 RAI14Q9P0K7 980 aa14.47□□□□□ -0.09
PDLIM5-208ENST00000504489 GAKO14976 1311 aa14.46□□□□□ -0.09
PDLIM5-208ENST00000504489 PITPNM2Q9BZ72 1349 aa14.46□□□□□ -0.09
PDLIM5-208ENST00000504489 LDHCP07864 332 aa14.46□□□□□ -0.09
PDLIM5-208ENST00000504489 MAP3K12Q12852 859 aa14.46□□□□□ -0.09
PDLIM5-208ENST00000504489 DIXDC1Q155Q3 683 aa14.46□□□□□ -0.09
PDLIM5-208ENST00000504489 SMC1BQ8NDV3 1235 aa14.46□□□□□ -0.09
PDLIM5-208ENST00000504489 ZNF384Q8TF68 577 aa14.46□□□□□ -0.09
PDLIM5-208ENST00000504489 PCDHAC2Q9Y5I4 1007 aa14.46□□□□□ -0.09
PDLIM5-208ENST00000504489 MYO1BO43795 1136 aa14.45□□□□□ -0.1
PDLIM5-208ENST00000504489 IDH1O75874 414 aaKnown RBP14.45□□□□□ -0.1
PDLIM5-208ENST00000504489 PDE4AP27815 886 aa14.45□□□□□ -0.1
PDLIM5-208ENST00000504489 FSTL1Q12841 308 aa14.45□□□□□ -0.1
PDLIM5-208ENST00000504489 APOBEC3HQ6NTF7 200 aaKnown RBP14.45□□□□□ -0.1
PDLIM5-208ENST00000504489 EDC3Q96F86 508 aaKnown RBP14.45□□□□□ -0.1
PDLIM5-208ENST00000504489 DCBLD2Q96PD2 775 aa14.45□□□□□ -0.1
PDLIM5-208ENST00000504489 DAGLAQ9Y4D2 1042 aa14.45□□□□□ -0.1
PDLIM5-208ENST00000504489 BAZ2AQ9UIF9 1905 aaKnown RBP14.45□□□□□ -0.1
PDLIM5-208ENST00000504489 MROH7-TTC4A0A0A0MT08 1334 aa14.44□□□□□ -0.1
PDLIM5-208ENST00000504489 ASTN2O75129 1339 aaPredicted RBP14.44□□□□□ -0.1
PDLIM5-208ENST00000504489 ANGEL2Q5VTE6 544 aaKnown RBP14.44□□□□□ -0.1
PDLIM5-208ENST00000504489 NAA16Q6N069 864 aaPredicted RBP14.44□□□□□ -0.1
PDLIM5-208ENST00000504489 CNTROBQ8N137 903 aa14.44□□□□□ -0.1
PDLIM5-208ENST00000504489 DCPSQ96C86 337 aaKnown RBP14.44□□□□□ -0.1
PDLIM5-208ENST00000504489 GGA3Q9NZ52 723 aa14.44□□□□□ -0.1
PDLIM5-208ENST00000504489 GPR75-ASB3A0A0A6YYF3 556 aa14.43□□□□□ -0.1
PDLIM5-208ENST00000504489 ITGBL1O95965 494 aaPredicted RBP14.43□□□□□ -0.1
PDLIM5-208ENST00000504489 MAP1SQ66K74 1059 aaPredicted RBP14.43□□□□□ -0.1
PDLIM5-208ENST00000504489 CDC37L1Q7L3B6 337 aa14.43□□□□□ -0.1
PDLIM5-208ENST00000504489 APOBEC3FQ8IUX4 373 aaKnown RBP14.43□□□□□ -0.1
PDLIM5-208ENST00000504489 MAGEB6Q8N7X4 407 aa14.43□□□□□ -0.1
PDLIM5-208ENST00000504489 KBTBD3Q8NAB2 608 aa14.43□□□□□ -0.1
PDLIM5-208ENST00000504489 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.43□□□□□ -0.1
PDLIM5-208ENST00000504489 TDRD3Q9H7E2 651 aaKnown RBP14.43□□□□□ -0.1
PDLIM5-208ENST00000504489 ZNF70Q9UC06 446 aaPredicted RBP14.43□□□□□ -0.1
PDLIM5-208ENST00000504489 GALR2O43603 387 aaPredicted RBP14.42□□□□□ -0.1
PDLIM5-208ENST00000504489 MAP4K4O95819 1239 aaPredicted RBP14.42□□□□□ -0.1
PDLIM5-208ENST00000504489 PDE6AP16499 860 aa14.42□□□□□ -0.1
PDLIM5-208ENST00000504489 CYP7A1P22680 504 aa14.42□□□□□ -0.1
PDLIM5-208ENST00000504489 PPP4CP60510 307 aa14.42□□□□□ -0.1
PDLIM5-208ENST00000504489 SLC9C2Q5TAH2 1124 aa14.42□□□□□ -0.1
PDLIM5-208ENST00000504489 FKBP1CQ5VVH2 108 aa14.42□□□□□ -0.1
PDLIM5-208ENST00000504489 SULF1Q8IWU6 871 aa14.42□□□□□ -0.1
PDLIM5-208ENST00000504489 NAV1Q8NEY1 1877 aa14.42□□□□□ -0.1
PDLIM5-208ENST00000504489 MYH8P13535 1937 aa14.41□□□□□ -0.1
PDLIM5-208ENST00000504489 TCRBV5S4A2TA0A5A2 114 aa14.41□□□□□ -0.1
PDLIM5-208ENST00000504489 CLRN2A0PK11 232 aa14.41□□□□□ -0.1
PDLIM5-208ENST00000504489 ADD2P35612 726 aa14.41□□□□□ -0.1
PDLIM5-208ENST00000504489 BTDP43251 543 aa14.41□□□□□ -0.1
PDLIM5-208ENST00000504489 ZSCAN25Q6NSZ9 544 aa14.41□□□□□ -0.1
PDLIM5-208ENST00000504489 CDC42EP5Q6NZY7 148 aa14.41□□□□□ -0.1
PDLIM5-208ENST00000504489 KRT26Q7Z3Y9 468 aa14.41□□□□□ -0.1
PDLIM5-208ENST00000504489 TICAM2Q86XR7 235 aa14.41□□□□□ -0.1
PDLIM5-208ENST00000504489 RASEFQ8IZ41 740 aa14.41□□□□□ -0.1
PDLIM5-208ENST00000504489 EVI5LQ96CN4 794 aa14.41□□□□□ -0.1
PDLIM5-208ENST00000504489 NOL10Q9BSC4 688 aaKnown RBP14.41□□□□□ -0.1
PDLIM5-208ENST00000504489 TMOD2Q9NZR1 351 aa14.41□□□□□ -0.1
PDLIM5-208ENST00000504489 BAG3O95817 575 aa14.4□□□□□ -0.1
PDLIM5-208ENST00000504489 UBE3CQ15386 1083 aa14.4□□□□□ -0.1
PDLIM5-208ENST00000504489 LRRFIP1Q32MZ4 808 aaKnown RBP14.4□□□□□ -0.1
PDLIM5-208ENST00000504489 ADGRA1Q86SQ6 560 aa14.4□□□□□ -0.1
PDLIM5-208ENST00000504489 USP48Q86UV5 1035 aa14.4□□□□□ -0.1
PDLIM5-208ENST00000504489 GLIS2Q9BZE0 524 aaPredicted RBP14.4□□□□□ -0.1
PDLIM5-208ENST00000504489 USP40Q9NVE5 1235 aa14.4□□□□□ -0.1
PDLIM5-208ENST00000504489 ZNF532Q9HCE3 1301 aa14.4□□□□□ -0.1
PDLIM5-208ENST00000504489 ZFYP08048 801 aaPredicted RBP14.39□□□□□ -0.11
PDLIM5-208ENST00000504489 PLCG2P16885 1265 aa14.39□□□□□ -0.11
PDLIM5-208ENST00000504489 VASPP50552 380 aaPredicted RBP14.39□□□□□ -0.11
PDLIM5-208ENST00000504489 RHBDL3P58872 404 aa14.39□□□□□ -0.11
PDLIM5-208ENST00000504489 TNFAIP1Q13829 316 aa14.39□□□□□ -0.11
PDLIM5-208ENST00000504489 FAM83AQ86UY5 434 aa14.39□□□□□ -0.11
PDLIM5-208ENST00000504489 CERS3Q8IU89 383 aa14.39□□□□□ -0.11
PDLIM5-208ENST00000504489 IDI2Q9BXS1 227 aa14.39□□□□□ -0.11
PDLIM5-208ENST00000504489 VEZTQ9HBM0 779 aa14.39□□□□□ -0.11
PDLIM5-208ENST00000504489 PPP2R3BQ9Y5P8 575 aa14.39□□□□□ -0.11
PDLIM5-208ENST00000504489 PASKQ96RG2 1323 aa14.39□□□□□ -0.11
PDLIM5-208ENST00000504489 RFX7Q2KHR2 1363 aa14.38□□□□□ -0.11
PDLIM5-208ENST00000504489 ADM5C9JUS6 153 aa14.38□□□□□ -0.11
PDLIM5-208ENST00000504489 TNNI2P48788 182 aa14.38□□□□□ -0.11
PDLIM5-208ENST00000504489 C1QTNF8P60827 252 aa14.38□□□□□ -0.11
PDLIM5-208ENST00000504489 TTC22Q5TAA0 569 aa14.38□□□□□ -0.11
PDLIM5-208ENST00000504489 DEFB129Q9H1M3 183 aa14.38□□□□□ -0.11
PDLIM5-208ENST00000504489 AATFQ9NY61 560 aaKnown RBP eCLIP14.38□□□□□ -0.11
PDLIM5-208ENST00000504489 DDX60LQ5H9U9 1706 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms