RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 CA12O43570 354 aa9.49□□□□□ -0.89
SKP2-203ENST00000504386 MCAMP43121 646 aa9.49□□□□□ -0.89
SKP2-203ENST00000504386 HDAC1Q13547 482 aaPredicted RBP9.49□□□□□ -0.89
SKP2-203ENST00000504386 RASA3Q14644 834 aa9.49□□□□□ -0.89
SKP2-203ENST00000504386 RGMBQ6NW40 437 aa9.49□□□□□ -0.89
SKP2-203ENST00000504386 DNAJC5GQ8N7S2 189 aa9.49□□□□□ -0.89
SKP2-203ENST00000504386 AIDAQ96BJ3 306 aa9.49□□□□□ -0.89
SKP2-203ENST00000504386 CAPNS2Q96L46 248 aa9.49□□□□□ -0.89
SKP2-203ENST00000504386 CRBNQ96SW2 442 aa9.49□□□□□ -0.89
SKP2-203ENST00000504386 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.49□□□□□ -0.89
SKP2-203ENST00000504386 CCDC8Q9H0W5 538 aaPredicted RBP9.49□□□□□ -0.89
SKP2-203ENST00000504386 TDRD3Q9H7E2 651 aaKnown RBP9.49□□□□□ -0.89
SKP2-203ENST00000504386 IL1RAPL2Q9NP60 686 aa9.49□□□□□ -0.89
SKP2-203ENST00000504386 MKRN1Q9UHC7 482 aaKnown RBP9.49□□□□□ -0.89
SKP2-203ENST00000504386 DAGLAQ9Y4D2 1042 aa9.49□□□□□ -0.89
SKP2-203ENST00000504386 MROH7-TTC4A0A0A0MT08 1334 aa9.49□□□□□ -0.89
SKP2-203ENST00000504386 MYH13Q9UKX3 1938 aa9.48□□□□□ -0.89
SKP2-203ENST00000504386 PAPPA2Q9BXP8 1791 aa9.48□□□□□ -0.89
SKP2-203ENST00000504386 ZNF646O15015 1829 aaPredicted RBP9.48□□□□□ -0.89
SKP2-203ENST00000504386 ENTPD3O75355 529 aa9.48□□□□□ -0.89
SKP2-203ENST00000504386 MECOMQ03112 1051 aa9.48□□□□□ -0.89
SKP2-203ENST00000504386 NAA16Q6N069 864 aaPredicted RBP9.48□□□□□ -0.89
SKP2-203ENST00000504386 ZSCAN25Q6NSZ9 544 aa9.48□□□□□ -0.89
SKP2-203ENST00000504386 APOBEC3HQ6NTF7 200 aaKnown RBP9.48□□□□□ -0.89
SKP2-203ENST00000504386 USP40Q9NVE5 1235 aa9.48□□□□□ -0.89
SKP2-203ENST00000504386 SUPT16HQ9Y5B9 1047 aaKnown RBP9.48□□□□□ -0.89
SKP2-203ENST00000504386 ASTN2O75129 1339 aaPredicted RBP9.48□□□□□ -0.89
SKP2-203ENST00000504386 WDR33Q9C0J8 1336 aaKnown RBP9.48□□□□□ -0.89
SKP2-203ENST00000504386 GPR75-ASB3A0A0A6YYF3 556 aa9.47□□□□□ -0.89
SKP2-203ENST00000504386 TCP10L2B9ZVM9 353 aa9.47□□□□□ -0.89
SKP2-203ENST00000504386 IDH1O75874 414 aaKnown RBP9.47□□□□□ -0.89
SKP2-203ENST00000504386 ATP5JP18859 108 aa9.47□□□□□ -0.89
SKP2-203ENST00000504386 BTDP43251 543 aa9.47□□□□□ -0.89
SKP2-203ENST00000504386 ZNF157P51786 506 aaPredicted RBP9.47□□□□□ -0.89
SKP2-203ENST00000504386 MAP3K11Q16584 847 aa9.47□□□□□ -0.89
SKP2-203ENST00000504386 FAM151AQ8WW52 585 aa9.47□□□□□ -0.89
SKP2-203ENST00000504386 NSUN4Q96CB9 384 aaKnown RBP9.47□□□□□ -0.89
SKP2-203ENST00000504386 IDI2Q9BXS1 227 aa9.47□□□□□ -0.89
SKP2-203ENST00000504386 ECHDC1Q9NTX5 307 aa9.47□□□□□ -0.89
SKP2-203ENST00000504386 CSADQ9Y600 493 aa9.47□□□□□ -0.89
SKP2-203ENST00000504386 TTC41PQ6P2S7 1318 aa9.47□□□□□ -0.89
SKP2-203ENST00000504386 ZAP70P43403 619 aa9.46□□□□□ -0.9
SKP2-203ENST00000504386 VEGFBP49765 207 aa9.46□□□□□ -0.9
SKP2-203ENST00000504386 HTRA3P83110 453 aa9.46□□□□□ -0.9
SKP2-203ENST00000504386 DIXDC1Q155Q3 683 aa9.46□□□□□ -0.9
SKP2-203ENST00000504386 CDC42EP5Q6NZY7 148 aa9.46□□□□□ -0.9
SKP2-203ENST00000504386 ANKRD13AQ8IZ07 590 aa9.46□□□□□ -0.9
SKP2-203ENST00000504386 TAOK2Q9UL54 1235 aa9.46□□□□□ -0.9
SKP2-203ENST00000504386 ANGEL1Q9UNK9 670 aaKnown RBP9.46□□□□□ -0.9
SKP2-203ENST00000504386 ECM29Q5VYK3 1845 aa9.46□□□□□ -0.9
SKP2-203ENST00000504386 GLRX3O76003 335 aaKnown RBP9.45□□□□□ -0.9
SKP2-203ENST00000504386 CYP2E1P05181 493 aaPredicted RBP9.45□□□□□ -0.9
SKP2-203ENST00000504386 SLC10A3P09131 477 aa9.45□□□□□ -0.9
SKP2-203ENST00000504386 ZBTB48P10074 688 aaPredicted RBP9.45□□□□□ -0.9
SKP2-203ENST00000504386 INHBEP58166 350 aa9.45□□□□□ -0.9
SKP2-203ENST00000504386 SREBF2Q12772 1141 aa9.45□□□□□ -0.9
SKP2-203ENST00000504386 GRIK5Q16478 980 aa9.45□□□□□ -0.9
SKP2-203ENST00000504386 TICAM2Q86XR7 235 aa9.45□□□□□ -0.9
SKP2-203ENST00000504386 ZSCAN29Q8IWY8 852 aaPredicted RBP9.45□□□□□ -0.9
SKP2-203ENST00000504386 SLC10A4Q96EP9 437 aa9.45□□□□□ -0.9
SKP2-203ENST00000504386 DDRGK1Q96HY6 314 aa9.45□□□□□ -0.9
SKP2-203ENST00000504386 DNAJC2Q99543 621 aaKnown RBP9.45□□□□□ -0.9
SKP2-203ENST00000504386 ZNF341Q9BYN7 854 aa9.45□□□□□ -0.9
SKP2-203ENST00000504386 DHX36Q9H2U1 1008 aaKnown RBP9.45□□□□□ -0.9
SKP2-203ENST00000504386 SNRKQ9NRH2 765 aa9.45□□□□□ -0.9
SKP2-203ENST00000504386 PAG1Q9NWQ8 432 aa9.45□□□□□ -0.9
SKP2-203ENST00000504386 TLR7Q9NYK1 1049 aaKnown RBP9.45□□□□□ -0.9
SKP2-203ENST00000504386 PCDHB15Q9Y5E8 787 aa9.45□□□□□ -0.9
SKP2-203ENST00000504386 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.45□□□□□ -0.9
SKP2-203ENST00000504386 WDHD1O75717 1129 aaPredicted RBP9.44□□□□□ -0.9
SKP2-203ENST00000504386 ZFYP08048 801 aaPredicted RBP9.44□□□□□ -0.9
SKP2-203ENST00000504386 CYP7A1P22680 504 aa9.44□□□□□ -0.9
SKP2-203ENST00000504386 PPP4CP60510 307 aa9.44□□□□□ -0.9
SKP2-203ENST00000504386 FMR1Q06787 632 aaKnown RBP eCLIP9.44□□□□□ -0.9
SKP2-203ENST00000504386 GRM1Q13255 1194 aa9.44□□□□□ -0.9
SKP2-203ENST00000504386 LDLRAD1Q5T700 205 aa9.44□□□□□ -0.9
SKP2-203ENST00000504386 OTUD7BQ6GQQ9 843 aa9.44□□□□□ -0.9
SKP2-203ENST00000504386 CYP4F22Q6NT55 531 aa9.44□□□□□ -0.9
SKP2-203ENST00000504386 PI16Q6UXB8 463 aa9.44□□□□□ -0.9
SKP2-203ENST00000504386 TBC1D9Q6ZT07 1266 aa9.44□□□□□ -0.9
SKP2-203ENST00000504386 AMOTL1Q8IY63 956 aa9.44□□□□□ -0.9
SKP2-203ENST00000504386 TEX11Q8IYF3 940 aa9.44□□□□□ -0.9
SKP2-203ENST00000504386 HAUS7Q99871 368 aa9.44□□□□□ -0.9
SKP2-203ENST00000504386 TRIM34Q9BYJ4 488 aa9.44□□□□□ -0.9
SKP2-203ENST00000504386 TMEM39BQ9GZU3 492 aa9.44□□□□□ -0.9
SKP2-203ENST00000504386 COL2A1P02458 1487 aaPredicted RBP9.44□□□□□ -0.9
SKP2-203ENST00000504386 MANSC4A6NHS7 340 aaPredicted RBP9.43□□□□□ -0.9
SKP2-203ENST00000504386 UBE2Q2LH0YL09 131 aa9.43□□□□□ -0.9
SKP2-203ENST00000504386 GOLIM4O00461 696 aa9.43□□□□□ -0.9
SKP2-203ENST00000504386 ALDH1A1P00352 501 aa9.43□□□□□ -0.9
SKP2-203ENST00000504386 HLA-DOAP06340 250 aa9.43□□□□□ -0.9
SKP2-203ENST00000504386 CENPBP07199 599 aaPredicted RBP9.43□□□□□ -0.9
SKP2-203ENST00000504386 MX1P20591 662 aa9.43□□□□□ -0.9
SKP2-203ENST00000504386 RGS3P49796 1198 aa9.43□□□□□ -0.9
SKP2-203ENST00000504386 MAP3K9P80192 1104 aa9.43□□□□□ -0.9
SKP2-203ENST00000504386 NBPF12Q5TAG4 269 aaPredicted RBP9.43□□□□□ -0.9
SKP2-203ENST00000504386 SLC9C2Q5TAH2 1124 aa9.43□□□□□ -0.9
SKP2-203ENST00000504386 ANKRD45Q5TZF3 282 aa9.43□□□□□ -0.9
SKP2-203ENST00000504386 PRAMEF18Q5VWM3 479 aa9.43□□□□□ -0.9
SKP2-203ENST00000504386 TEPSINQ96N21 525 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms