RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 USP50Q70EL3 339 aaPredicted RBP16.06■□□□□ 0.16
PDLIM7-212ENST00000504380 MIGA1Q8NAN2 632 aa16.06■□□□□ 0.16
PDLIM7-212ENST00000504380 ZDHHC15Q96MV8 337 aa16.06■□□□□ 0.16
PDLIM7-212ENST00000504380 GAKO14976 1311 aa16.05■□□□□ 0.16
PDLIM7-212ENST00000504380 LDHCP07864 332 aa16.05■□□□□ 0.16
PDLIM7-212ENST00000504380 SDSP20132 328 aa16.05■□□□□ 0.16
PDLIM7-212ENST00000504380 ANGEL2Q5VTE6 544 aaKnown RBP16.05■□□□□ 0.16
PDLIM7-212ENST00000504380 DLK2Q6UY11 383 aa16.05■□□□□ 0.16
PDLIM7-212ENST00000504380 CNTROBQ8N137 903 aa16.05■□□□□ 0.16
PDLIM7-212ENST00000504380 MTMR14Q8NCE2 650 aa16.05■□□□□ 0.16
PDLIM7-212ENST00000504380 MRIQ9BWK5 157 aa16.05■□□□□ 0.16
PDLIM7-212ENST00000504380 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.05■□□□□ 0.165e-9■■□□□ 13.9
PDLIM7-212ENST00000504380 AATFQ9NY61 560 aaKnown RBP eCLIP16.05■□□□□ 0.16
PDLIM7-212ENST00000504380 ZNF70Q9UC06 446 aaPredicted RBP16.05■□□□□ 0.16
PDLIM7-212ENST00000504380 MYH7P12883 1935 aa16.05■□□□□ 0.16
PDLIM7-212ENST00000504380 PCNTO95613 3336 aa16.04■□□□□ 0.16
PDLIM7-212ENST00000504380 RNF113AO15541 343 aaKnown RBP16.04■□□□□ 0.16
PDLIM7-212ENST00000504380 SLC34A2O95436 690 aa16.04■□□□□ 0.16
PDLIM7-212ENST00000504380 CDC42EP5Q6NZY7 148 aa16.04■□□□□ 0.16
PDLIM7-212ENST00000504380 PNMA8AQ86V59 439 aaPredicted RBP16.04■□□□□ 0.16
PDLIM7-212ENST00000504380 SLF2Q8IX21 1173 aa16.04■□□□□ 0.16
PDLIM7-212ENST00000504380 FAM163AQ96GL9 167 aaPredicted RBP16.04■□□□□ 0.16
PDLIM7-212ENST00000504380 USP40Q9NVE5 1235 aa16.04■□□□□ 0.16
PDLIM7-212ENST00000504380 GGA3Q9NZ52 723 aa16.04■□□□□ 0.16
PDLIM7-212ENST00000504380 POLR2AP24928 1970 aaKnown RBP16.04■□□□□ 0.16
PDLIM7-212ENST00000504380 GPR75-ASB3A0A0A6YYF3 556 aa16.03■□□□□ 0.16
PDLIM7-212ENST00000504380 MMP14P50281 582 aa16.03■□□□□ 0.16
PDLIM7-212ENST00000504380 MAP1SQ66K74 1059 aaPredicted RBP16.03■□□□□ 0.16
PDLIM7-212ENST00000504380 SH3RF3Q8TEJ3 882 aaPredicted RBP16.03■□□□□ 0.16
PDLIM7-212ENST00000504380 SEC62Q99442 399 aaKnown RBP16.03■□□□□ 0.16
PDLIM7-212ENST00000504380 VEZTQ9HBM0 779 aa16.03■□□□□ 0.16
PDLIM7-212ENST00000504380 AK9Q5TCS8 1911 aa16.03■□□□□ 0.16
PDLIM7-212ENST00000504380 TCP10L2B9ZVM9 353 aa16.02■□□□□ 0.16
PDLIM7-212ENST00000504380 RHBDL3P58872 404 aa16.02■□□□□ 0.16
PDLIM7-212ENST00000504380 SPDYE2Q495Y8 402 aa16.02■□□□□ 0.16
PDLIM7-212ENST00000504380 ZSCAN25Q6NSZ9 544 aa16.02■□□□□ 0.16
PDLIM7-212ENST00000504380 SMC1BQ8NDV3 1235 aa16.02■□□□□ 0.16
PDLIM7-212ENST00000504380 OSBP2Q969R2 916 aa16.02■□□□□ 0.16
PDLIM7-212ENST00000504380 PUS7LQ9H0K6 701 aaKnown RBP16.02■□□□□ 0.16
PDLIM7-212ENST00000504380 ARMT1Q9H993 441 aa16.02■□□□□ 0.16
PDLIM7-212ENST00000504380 MAGEB6P1A0A0J9YX57 407 aa16.01■□□□□ 0.15
PDLIM7-212ENST00000504380 ADM5C9JUS6 153 aa16.01■□□□□ 0.15
PDLIM7-212ENST00000504380 M0R2C6 588 aa16.01■□□□□ 0.15
PDLIM7-212ENST00000504380 MYO1BO43795 1136 aa16.01■□□□□ 0.15
PDLIM7-212ENST00000504380 FMR1Q06787 632 aaKnown RBP eCLIP16.01■□□□□ 0.15
PDLIM7-212ENST00000504380 UBE3CQ15386 1083 aa16.01■□□□□ 0.15
PDLIM7-212ENST00000504380 USP48Q86UV5 1035 aa16.01■□□□□ 0.15
PDLIM7-212ENST00000504380 LDHDQ86WU2 507 aa16.01■□□□□ 0.15
PDLIM7-212ENST00000504380 LCORLQ8N3X6 602 aa16.01■□□□□ 0.15
PDLIM7-212ENST00000504380 FAM227BQ96M60 508 aa16.01■□□□□ 0.15
PDLIM7-212ENST00000504380 NOL10Q9BSC4 688 aaKnown RBP16.01■□□□□ 0.15
PDLIM7-212ENST00000504380 GLIS2Q9BZE0 524 aaPredicted RBP16.01■□□□□ 0.15
PDLIM7-212ENST00000504380 MBD4O95243 580 aa16■□□□□ 0.15
PDLIM7-212ENST00000504380 TCP10Q12799 353 aa16■□□□□ 0.15
PDLIM7-212ENST00000504380 NFIAQ12857 509 aa16■□□□□ 0.15
PDLIM7-212ENST00000504380 NMIQ13287 307 aaPredicted RBP16■□□□□ 0.15
PDLIM7-212ENST00000504380 PRAMEF18Q5VWM3 479 aa16■□□□□ 0.15
PDLIM7-212ENST00000504380 CCDC129Q6ZRS4 1044 aa16■□□□□ 0.15
PDLIM7-212ENST00000504380 TEX11Q8IYF3 940 aa16■□□□□ 0.15
PDLIM7-212ENST00000504380 APPBP2Q92624 585 aa16■□□□□ 0.15
PDLIM7-212ENST00000504380 DCPSQ96C86 337 aaKnown RBP16■□□□□ 0.15
PDLIM7-212ENST00000504380 RIOK1Q9BRS2 568 aaKnown RBP16■□□□□ 0.15
PDLIM7-212ENST00000504380 PGAP2Q9UHJ9 254 aa16■□□□□ 0.15
PDLIM7-212ENST00000504380 ECM29Q5VYK3 1845 aa16■□□□□ 0.15
PDLIM7-212ENST00000504380 A0A0D9SFI3 127 aa15.99■□□□□ 0.15
PDLIM7-212ENST00000504380 TRAF5O00463 557 aa15.99■□□□□ 0.15
PDLIM7-212ENST00000504380 PRKAB2O43741 272 aa15.99■□□□□ 0.15
PDLIM7-212ENST00000504380 BAG3O95817 575 aa15.99■□□□□ 0.15
PDLIM7-212ENST00000504380 ZFYP08048 801 aaPredicted RBP15.99■□□□□ 0.15
PDLIM7-212ENST00000504380 HSPA1AP0DMV8 641 aaKnown RBP15.99■□□□□ 0.15
PDLIM7-212ENST00000504380 HSPA1BP0DMV9 641 aaKnown RBP15.99■□□□□ 0.15
PDLIM7-212ENST00000504380 PPP4CP60510 307 aa15.99■□□□□ 0.15
PDLIM7-212ENST00000504380 PICALMQ13492 652 aa15.99■□□□□ 0.15
PDLIM7-212ENST00000504380 ZMYM1Q5SVZ6 1142 aa15.99■□□□□ 0.15
PDLIM7-212ENST00000504380 CHADLQ6NUI6 762 aa15.99■□□□□ 0.15
PDLIM7-212ENST00000504380 ZFPM1Q8IX07 1006 aa15.99■□□□□ 0.15
PDLIM7-212ENST00000504380 ZC3H15Q8WU90 426 aaKnown RBP15.99■□□□□ 0.15
PDLIM7-212ENST00000504380 DDX4Q9NQI0 724 aaKnown RBP15.99■□□□□ 0.15
PDLIM7-212ENST00000504380 IGSF3O75054 1194 aa15.98■□□□□ 0.15
PDLIM7-212ENST00000504380 WDHD1O75717 1129 aaPredicted RBP15.98■□□□□ 0.15
PDLIM7-212ENST00000504380 LRRFIP1Q32MZ4 808 aaKnown RBP15.98■□□□□ 0.15
PDLIM7-212ENST00000504380 BMP2KLQ5H9B9 411 aa15.98■□□□□ 0.15
PDLIM7-212ENST00000504380 CWC27Q6UX04 472 aaKnown RBP15.98■□□□□ 0.15
PDLIM7-212ENST00000504380 KRT26Q7Z3Y9 468 aa15.98■□□□□ 0.15
PDLIM7-212ENST00000504380 CDAN1Q8IWY9 1227 aa15.98■□□□□ 0.15
PDLIM7-212ENST00000504380 TGFBRAP1Q8WUH2 860 aa15.98■□□□□ 0.15
PDLIM7-212ENST00000504380 DIAPH3Q9NSV4 1193 aa15.98■□□□□ 0.15
PDLIM7-212ENST00000504380 TMOD2Q9NZR1 351 aa15.98■□□□□ 0.15
PDLIM7-212ENST00000504380 FAM198AQ9UFP1 575 aa15.98■□□□□ 0.15
PDLIM7-212ENST00000504380 CNTNAP1P78357 1384 aa15.98■□□□□ 0.15
PDLIM7-212ENST00000504380 CHMLP26374 656 aa15.97■□□□□ 0.15
PDLIM7-212ENST00000504380 APOBEC3FQ8IUX4 373 aaKnown RBP15.97■□□□□ 0.15
PDLIM7-212ENST00000504380 MAPKAPK5Q8IW41 473 aa15.97■□□□□ 0.15
PDLIM7-212ENST00000504380 SULF1Q8IWU6 871 aa15.97■□□□□ 0.15
PDLIM7-212ENST00000504380 AIDAQ96BJ3 306 aa15.97■□□□□ 0.15
PDLIM7-212ENST00000504380 GPAA1O43292 621 aa15.96■□□□□ 0.15
PDLIM7-212ENST00000504380 RASA3Q14644 834 aa15.96■□□□□ 0.15
PDLIM7-212ENST00000504380 SLC4A8Q2Y0W8 1093 aa15.96■□□□□ 0.15
PDLIM7-212ENST00000504380 CDC37L1Q7L3B6 337 aa15.96■□□□□ 0.15
PDLIM7-212ENST00000504380 SDR42E1Q8WUS8 393 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms