RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 DZIP1LQ8IYY4 767 aaKnown RBP16.19■□□□□ 0.18
LSM6-204ENST00000504181 MPHOSPH8Q99549 860 aa16.19■□□□□ 0.18
LSM6-204ENST00000504181 NBPF3Q9H094 633 aa16.19■□□□□ 0.18
LSM6-204ENST00000504181 CLSPNQ9HAW4 1339 aa16.19■□□□□ 0.18
LSM6-204ENST00000504181 MYH13Q9UKX3 1938 aa16.18■□□□□ 0.18
LSM6-204ENST00000504181 TNFRSF10AO00220 468 aa16.18■□□□□ 0.18
LSM6-204ENST00000504181 TAF5LO75529 589 aa16.18■□□□□ 0.18
LSM6-204ENST00000504181 CYP2C8P10632 490 aa16.18■□□□□ 0.18
LSM6-204ENST00000504181 PPATQ06203 517 aa16.18■□□□□ 0.18
LSM6-204ENST00000504181 LMOD3Q0VAK6 560 aa16.18■□□□□ 0.18
LSM6-204ENST00000504181 PARK7Q99497 189 aaKnown RBP16.18■□□□□ 0.18
LSM6-204ENST00000504181 C11orf49Q9H6J7 331 aa16.18■□□□□ 0.18
LSM6-204ENST00000504181 TTF2Q9UNY4 1162 aaKnown RBP16.18■□□□□ 0.18
LSM6-204ENST00000504181 PHIPQ8WWQ0 1821 aa16.17■□□□□ 0.18
LSM6-204ENST00000504181 TMEM265A0A087WTH1 108 aa16.17■□□□□ 0.18
LSM6-204ENST00000504181 ITGA6P23229 1130 aa16.17■□□□□ 0.18
LSM6-204ENST00000504181 CACNB3P54284 484 aa16.17■□□□□ 0.18
LSM6-204ENST00000504181 METTL22Q9BUU2 404 aaPredicted RBP16.17■□□□□ 0.18
LSM6-204ENST00000504181 SERPINA10Q9UK55 444 aa16.17■□□□□ 0.18
LSM6-204ENST00000504181 DOCK2Q92608 1830 aa16.17■□□□□ 0.18
LSM6-204ENST00000504181 TNPO2O14787 897 aaKnown RBP16.16■□□□□ 0.18
LSM6-204ENST00000504181 TMPOP42166 694 aaKnown RBP16.16■□□□□ 0.18
LSM6-204ENST00000504181 IRF5Q13568 498 aa16.16■□□□□ 0.18
LSM6-204ENST00000504181 MOGSQ13724 837 aa16.16■□□□□ 0.18
LSM6-204ENST00000504181 DUSP27Q5VZP5 1158 aa16.16■□□□□ 0.18
LSM6-204ENST00000504181 MYLIPQ8WY64 445 aa16.16■□□□□ 0.18
LSM6-204ENST00000504181 INPP5BP32019 993 aa16.15■□□□□ 0.18
LSM6-204ENST00000504181 CRKP46108 304 aa16.15■□□□□ 0.18
LSM6-204ENST00000504181 C15orf52Q6ZUT6 534 aaKnown RBP16.15■□□□□ 0.18
LSM6-204ENST00000504181 KCNH4Q9UQ05 1017 aa16.15■□□□□ 0.18
LSM6-204ENST00000504181 NEUROD2Q15784 382 aa16.14■□□□□ 0.17
LSM6-204ENST00000504181 MFSD14BQ5SR56 506 aa16.14■□□□□ 0.17
LSM6-204ENST00000504181 PFASO15067 1338 aa16.14■□□□□ 0.17
LSM6-204ENST00000504181 BDP1A6H8Y1 2624 aa16.13■□□□□ 0.17
LSM6-204ENST00000504181 IGKV5-2P06315 115 aa16.13■□□□□ 0.17
LSM6-204ENST00000504181 GPAT2Q6NUI2 795 aa16.13■□□□□ 0.17
LSM6-204ENST00000504181 MAP3K2Q9Y2U5 619 aa16.13■□□□□ 0.17
LSM6-204ENST00000504181 DOCK1Q14185 1865 aa16.13■□□□□ 0.17
LSM6-204ENST00000504181 NCOR1O75376 2440 aa16.13■□□□□ 0.17
LSM6-204ENST00000504181 TJAP1Q5JTD0 557 aa16.12■□□□□ 0.17
LSM6-204ENST00000504181 DCAF15Q66K64 600 aa16.12■□□□□ 0.17
LSM6-204ENST00000504181 MIGA2Q7L4E1 593 aa16.12■□□□□ 0.17
LSM6-204ENST00000504181 UBE3BQ7Z3V4 1068 aa16.12■□□□□ 0.17
LSM6-204ENST00000504181 ZNF341Q9BYN7 854 aa16.12■□□□□ 0.17
LSM6-204ENST00000504181 SEMA6BQ9H3T3 888 aa16.12■□□□□ 0.17
LSM6-204ENST00000504181 FOSL2P15408 326 aa16.11■□□□□ 0.17
LSM6-204ENST00000504181 HOOK2Q96ED9 719 aa16.11■□□□□ 0.17
LSM6-204ENST00000504181 PCGF6Q9BYE7 350 aa16.11■□□□□ 0.17
LSM6-204ENST00000504181 DDX58O95786 925 aaKnown RBP16.1■□□□□ 0.17
LSM6-204ENST00000504181 HMGCRP04035 888 aa16.1■□□□□ 0.17
LSM6-204ENST00000504181 TRIM32Q13049 653 aa16.1■□□□□ 0.17
LSM6-204ENST00000504181 CWF19L2Q2TBE0 894 aaKnown RBP16.1■□□□□ 0.17
LSM6-204ENST00000504181 COA7Q96BR5 231 aa16.1■□□□□ 0.17
LSM6-204ENST00000504181 HMX1Q9NP08 348 aaPredicted RBP16.1■□□□□ 0.17
LSM6-204ENST00000504181 TCF20Q9UGU0 1960 aaKnown RBP16.09■□□□□ 0.17
LSM6-204ENST00000504181 MAP3K12Q12852 859 aa16.09■□□□□ 0.17
LSM6-204ENST00000504181 LRRC26Q2I0M4 334 aa16.09■□□□□ 0.17
LSM6-204ENST00000504181 OGDHLQ9ULD0 1010 aa16.09■□□□□ 0.17
LSM6-204ENST00000504181 ATAD5Q96QE3 1844 aa16.09■□□□□ 0.17
LSM6-204ENST00000504181 ELL2O00472 640 aaPredicted RBP16.08■□□□□ 0.16
LSM6-204ENST00000504181 GRIK5Q16478 980 aa16.08■□□□□ 0.16
LSM6-204ENST00000504181 FAM83AQ86UY5 434 aa16.08■□□□□ 0.16
LSM6-204ENST00000504181 TTYH1Q9H313 450 aaPredicted RBP16.08■□□□□ 0.16
LSM6-204ENST00000504181 TMOD2Q9NZR1 351 aa16.08■□□□□ 0.16
LSM6-204ENST00000504181 RPAP1Q9BWH6 1393 aaPredicted RBP16.08■□□□□ 0.16
LSM6-204ENST00000504181 H7C1W4 665 aa16.07■□□□□ 0.16
LSM6-204ENST00000504181 PLIN1O60240 522 aa16.07■□□□□ 0.16
LSM6-204ENST00000504181 GADL1Q6ZQY3 521 aa16.07■□□□□ 0.16
LSM6-204ENST00000504181 SMCR8Q8TEV9 937 aaPredicted RBP16.07■□□□□ 0.16
LSM6-204ENST00000504181 LBHD1Q9BQE6 289 aaPredicted RBP16.07■□□□□ 0.16
LSM6-204ENST00000504181 TRIM35Q9UPQ4 493 aa16.07■□□□□ 0.16
LSM6-204ENST00000504181 LOC285556D6RIA3 1793 aa16.07■□□□□ 0.16
LSM6-204ENST00000504181 ANKRD18BA2A2Z9 1011 aa16.06■□□□□ 0.16
LSM6-204ENST00000504181 PI4KAP2A4QPH2 592 aa16.06■□□□□ 0.16
LSM6-204ENST00000504181 NEURL1BA8MQ27 555 aa16.06■□□□□ 0.16
LSM6-204ENST00000504181 NEXNQ0ZGT2 675 aa16.06■□□□□ 0.16
LSM6-204ENST00000504181 PI4KAP1Q8N8J0 262 aa16.06■□□□□ 0.16
LSM6-204ENST00000504181 TDRD7Q8NHU6 1098 aaKnown RBP16.06■□□□□ 0.16
LSM6-204ENST00000504181 MBIPQ9NS73 344 aa16.06■□□□□ 0.16
LSM6-204ENST00000504181 RLFQ13129 1914 aa16.06■□□□□ 0.16
LSM6-204ENST00000504181 CXCL11O14625 94 aa16.05■□□□□ 0.16
LSM6-204ENST00000504181 CSF1RP07333 972 aa16.05■□□□□ 0.16
LSM6-204ENST00000504181 COL6A1P12109 1028 aa16.05■□□□□ 0.16
LSM6-204ENST00000504181 GYG1P46976 350 aa16.05■□□□□ 0.16
LSM6-204ENST00000504181 ANKRD13CQ8N6S4 541 aa16.05■□□□□ 0.16
LSM6-204ENST00000504181 USP38Q8NB14 1042 aa16.05■□□□□ 0.16
LSM6-204ENST00000504181 PLA2G12BQ9BX93 195 aa16.05■□□□□ 0.16
LSM6-204ENST00000504181 ZNF112Q9UJU3 913 aa16.05■□□□□ 0.16
LSM6-204ENST00000504181 MYO9BQ13459 2157 aa16.04■□□□□ 0.16
LSM6-204ENST00000504181 A0A0G2JLL6 359 aaPredicted RBP16.04■□□□□ 0.16
LSM6-204ENST00000504181 TRIM26Q12899 539 aaPredicted RBP16.04■□□□□ 0.16
LSM6-204ENST00000504181 NOL9Q5SY16 702 aaKnown RBP16.04■□□□□ 0.16
LSM6-204ENST00000504181 KSR2Q6VAB6 950 aa16.04■□□□□ 0.16
LSM6-204ENST00000504181 FASTKD5Q7L8L6 764 aaKnown RBP16.04■□□□□ 0.16
LSM6-204ENST00000504181 PRRT2Q7Z6L0 340 aaPredicted RBP16.04■□□□□ 0.16
LSM6-204ENST00000504181 CCDC146Q8IYE0 955 aa16.04■□□□□ 0.16
LSM6-204ENST00000504181 TEKT1Q969V4 418 aa16.04■□□□□ 0.16
LSM6-204ENST00000504181 CACNA1FO60840 1977 aa16.02■□□□□ 0.16
LSM6-204ENST00000504181 HIBADHP31937 336 aaKnown RBP16.02■□□□□ 0.16
LSM6-204ENST00000504181 HDLBPQ00341 1268 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms