RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 MNAT1P51948 309 aa20.41■□□□□ 0.86
POLR2J3-209ENST00000504157 STK38Q15208 465 aa20.41■□□□□ 0.86
POLR2J3-209ENST00000504157 CEP120Q8N960 986 aa20.41■□□□□ 0.86
POLR2J3-209ENST00000504157 RBM33Q96EV2 1170 aaKnown RBP20.41■□□□□ 0.86
POLR2J3-209ENST00000504157 BAG1Q99933 345 aaPredicted RBP20.41■□□□□ 0.86
POLR2J3-209ENST00000504157 SUGCTQ9HAC7 445 aa20.41■□□□□ 0.86
POLR2J3-209ENST00000504157 TUBE1Q9UJT0 475 aa20.41■□□□□ 0.86
POLR2J3-209ENST00000504157 OVOS2A0A0G2JMS6 1433 aa20.41■□□□□ 0.86
POLR2J3-209ENST00000504157 ZNF202O95125 648 aa20.41■□□□□ 0.86
POLR2J3-209ENST00000504157 TUBBP07437 444 aa20.41■□□□□ 0.86
POLR2J3-209ENST00000504157 TUBB2AQ13885 445 aa20.41■□□□□ 0.86
POLR2J3-209ENST00000504157 CCDC12Q8WUD4 166 aaPredicted RBP20.41■□□□□ 0.86
POLR2J3-209ENST00000504157 TUBB2BQ9BVA1 445 aa20.41■□□□□ 0.86
POLR2J3-209ENST00000504157 LRRC2Q9BYS8 371 aa20.41■□□□□ 0.86
POLR2J3-209ENST00000504157 LAMA4Q16363 1823 aa20.4■□□□□ 0.86
POLR2J3-209ENST00000504157 SPTLC2O15270 562 aa20.4■□□□□ 0.86
POLR2J3-209ENST00000504157 KCNQ3O43525 872 aa20.4■□□□□ 0.86
POLR2J3-209ENST00000504157 CMA1P23946 247 aa20.4■□□□□ 0.86
POLR2J3-209ENST00000504157 TRDNQ13061 729 aa20.4■□□□□ 0.86
POLR2J3-209ENST00000504157 BRAPQ7Z569 592 aa20.4■□□□□ 0.86
POLR2J3-209ENST00000504157 TACO1Q9BSH4 297 aaKnown RBP20.4■□□□□ 0.86
POLR2J3-209ENST00000504157 PLEKHA4Q9H4M7 779 aa20.4■□□□□ 0.86
POLR2J3-209ENST00000504157 EXOC5O00471 708 aa20.39■□□□□ 0.86
POLR2J3-209ENST00000504157 WDHD1O75717 1129 aaPredicted RBP20.39■□□□□ 0.86
POLR2J3-209ENST00000504157 SERPINC1P01008 464 aa20.39■□□□□ 0.86
POLR2J3-209ENST00000504157 PDIA3P30101 505 aaKnown RBP20.39■□□□□ 0.86
POLR2J3-209ENST00000504157 MYL5Q02045 173 aa20.39■□□□□ 0.86
POLR2J3-209ENST00000504157 GOLGA8FQ08AF8 430 aa20.39■□□□□ 0.86
POLR2J3-209ENST00000504157 GOLGA8DPQ0D2H9 430 aa20.39■□□□□ 0.86
POLR2J3-209ENST00000504157 SF3A1Q15459 793 aaKnown RBP20.39■□□□□ 0.86
POLR2J3-209ENST00000504157 CFAP100Q494V2 611 aa20.39■□□□□ 0.86
POLR2J3-209ENST00000504157 DSCC1Q9BVC3 393 aa20.39■□□□□ 0.86
POLR2J3-209ENST00000504157 ZSWIM4Q9H7M6 989 aa20.39■□□□□ 0.86
POLR2J3-209ENST00000504157 LGR6Q9HBX8 967 aa20.39■□□□□ 0.86
POLR2J3-209ENST00000504157 CDC23Q9UJX2 597 aa20.39■□□□□ 0.86
POLR2J3-209ENST00000504157 FOSBP53539 338 aa20.39■□□□□ 0.85
POLR2J3-209ENST00000504157 TBX2Q13207 712 aaPredicted RBP20.39■□□□□ 0.85
POLR2J3-209ENST00000504157 PLEKHO1Q53GL0 409 aaPredicted RBP20.39■□□□□ 0.85
POLR2J3-209ENST00000504157 WWC2Q6AWC2 1192 aa20.39■□□□□ 0.85
POLR2J3-209ENST00000504157 KCNV1Q6PIU1 500 aa20.39■□□□□ 0.85
POLR2J3-209ENST00000504157 TOGARAM2Q6ZUX3 1019 aa20.39■□□□□ 0.85
POLR2J3-209ENST00000504157 AFAP1L1Q8TED9 768 aa20.39■□□□□ 0.85
POLR2J3-209ENST00000504157 EDC3Q96F86 508 aaKnown RBP20.39■□□□□ 0.85
POLR2J3-209ENST00000504157 SIL1Q9H173 461 aa20.39■□□□□ 0.85
POLR2J3-209ENST00000504157 A1CFQ9NQ94 594 aaKnown RBP20.39■□□□□ 0.85
POLR2J3-209ENST00000504157 CCDC189A1A4V9 331 aa20.38■□□□□ 0.85
POLR2J3-209ENST00000504157 BTBD11A6QL63 1104 aa20.38■□□□□ 0.85
POLR2J3-209ENST00000504157 TDO2P48775 406 aa20.38■□□□□ 0.85
POLR2J3-209ENST00000504157 AARSP49588 968 aaKnown RBP eCLIP20.38■□□□□ 0.85
POLR2J3-209ENST00000504157 NGDNQ8NEJ9 315 aaKnown RBP20.38■□□□□ 0.85
POLR2J3-209ENST00000504157 HAUS7Q99871 368 aa20.38■□□□□ 0.85
POLR2J3-209ENST00000504157 VIPAS39Q9H9C1 493 aa20.38■□□□□ 0.85
POLR2J3-209ENST00000504157 COPRSQ9NQ92 184 aa20.38■□□□□ 0.85
POLR2J3-209ENST00000504157 DBNLQ9UJU6 430 aaKnown RBP20.38■□□□□ 0.85
POLR2J3-209ENST00000504157 CLIC4Q9Y696 253 aa20.38■□□□□ 0.85
POLR2J3-209ENST00000504157 BIN1O00499 593 aa20.38■□□□□ 0.85
POLR2J3-209ENST00000504157 PHACTR2O75167 634 aa20.38■□□□□ 0.85
POLR2J3-209ENST00000504157 DDX58O95786 925 aaKnown RBP20.38■□□□□ 0.85
POLR2J3-209ENST00000504157 FDPSP14324 419 aaKnown RBP20.38■□□□□ 0.85
POLR2J3-209ENST00000504157 NLRP6P59044 892 aa20.38■□□□□ 0.85
POLR2J3-209ENST00000504157 CCDC129Q6ZRS4 1044 aa20.38■□□□□ 0.85
POLR2J3-209ENST00000504157 TEFQ10587 303 aa20.37■□□□□ 0.85
POLR2J3-209ENST00000504157 SEC62Q99442 399 aaKnown RBP20.37■□□□□ 0.85
POLR2J3-209ENST00000504157 PALLDQ8WX93 1383 aa20.37■□□□□ 0.85
POLR2J3-209ENST00000504157 RNF40O75150 1001 aa20.37■□□□□ 0.85
POLR2J3-209ENST00000504157 VSNL1P62760 191 aa20.37■□□□□ 0.85
POLR2J3-209ENST00000504157 CCT2P78371 535 aaKnown RBP20.37■□□□□ 0.85
POLR2J3-209ENST00000504157 PROSER3Q2NL68 480 aa20.37■□□□□ 0.85
POLR2J3-209ENST00000504157 STAG1Q8WVM7 1258 aa20.37■□□□□ 0.85
POLR2J3-209ENST00000504157 TMEM232C9JQI7 657 aa20.36■□□□□ 0.85
POLR2J3-209ENST00000504157 SHOX2O60902 331 aaPredicted RBP20.36■□□□□ 0.85
POLR2J3-209ENST00000504157 PRPF6O94906 941 aaKnown RBP20.36■□□□□ 0.85
POLR2J3-209ENST00000504157 PFKFB1P16118 471 aa20.36■□□□□ 0.85
POLR2J3-209ENST00000504157 LIG3P49916 1009 aa20.36■□□□□ 0.85
POLR2J3-209ENST00000504157 GUCY1B3Q02153 619 aa20.36■□□□□ 0.85
POLR2J3-209ENST00000504157 TNNI3KQ59H18 835 aa20.36■□□□□ 0.85
POLR2J3-209ENST00000504157 AKAP4Q5JQC9 854 aa20.36■□□□□ 0.85
POLR2J3-209ENST00000504157 MYSM1Q5VVJ2 828 aa20.36■□□□□ 0.85
POLR2J3-209ENST00000504157 NCOA5Q9HCD5 579 aaKnown RBP20.36■□□□□ 0.85
POLR2J3-209ENST00000504157 HELLSQ9NRZ9 838 aa20.36■□□□□ 0.85
POLR2J3-209ENST00000504157 PUF60Q9UHX1 559 aaKnown RBP20.36■□□□□ 0.85
POLR2J3-209ENST00000504157 FPGT-TNNI3KV9GXZ4 949 aa20.36■□□□□ 0.85
POLR2J3-209ENST00000504157 LRRIQ3A6PVS8 624 aaPredicted RBP20.35■□□□□ 0.85
POLR2J3-209ENST00000504157 C21orf2O43822 256 aa20.35■□□□□ 0.85
POLR2J3-209ENST00000504157 CTCFLQ8NI51 663 aaPredicted RBP20.35■□□□□ 0.85
POLR2J3-209ENST00000504157 FAM237AA0A1B0GTK4 181 aa20.35■□□□□ 0.85
POLR2J3-209ENST00000504157 KBTBD3Q8NAB2 608 aa20.35■□□□□ 0.85
POLR2J3-209ENST00000504157 ZNF335Q9H4Z2 1342 aaPredicted RBP20.35■□□□□ 0.85
POLR2J3-209ENST00000504157 CNPY4Q8N129 248 aa20.34■□□□□ 0.85
POLR2J3-209ENST00000504157 TC2NQ8N9U0 490 aa20.34■□□□□ 0.85
POLR2J3-209ENST00000504157 INTS13Q9NVM9 706 aa20.34■□□□□ 0.85
POLR2J3-209ENST00000504157 SYF2O95926 243 aaKnown RBP20.34■□□□□ 0.85
POLR2J3-209ENST00000504157 POTEDQ86YR6 584 aa20.34■□□□□ 0.85
POLR2J3-209ENST00000504157 CLIC6Q96NY7 704 aa20.34■□□□□ 0.85
POLR2J3-209ENST00000504157 HPSEQ9Y251 543 aa20.34■□□□□ 0.85
POLR2J3-209ENST00000504157 FAM169AQ9Y6X4 670 aa20.34■□□□□ 0.85
POLR2J3-209ENST00000504157 E7EWF7 191 aa20.33■□□□□ 0.85
POLR2J3-209ENST00000504157 KARSQ15046 597 aaKnown RBP20.33■□□□□ 0.85
POLR2J3-209ENST00000504157 ANO1Q5XXA6 986 aa20.33■□□□□ 0.85
POLR2J3-209ENST00000504157 PROSER2Q86WR7 435 aaPredicted RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms