RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 TMEM87AQ8NBN3 555 aa18.63■□□□□ 0.57
PCDHA1-203ENST00000504120 RGS22Q8NE09 1264 aa18.63■□□□□ 0.57
PCDHA1-203ENST00000504120 VEZTQ9HBM0 779 aa18.63■□□□□ 0.57
PCDHA1-203ENST00000504120 ANGEL1Q9UNK9 670 aaKnown RBP18.63■□□□□ 0.57
PCDHA1-203ENST00000504120 KDM2BQ8NHM5 1336 aa18.63■□□□□ 0.57
PCDHA1-203ENST00000504120 FERP16591 822 aa18.62■□□□□ 0.57
PCDHA1-203ENST00000504120 SYT10Q6XYQ8 523 aa18.62■□□□□ 0.57
PCDHA1-203ENST00000504120 CCDC129Q6ZRS4 1044 aa18.62■□□□□ 0.57
PCDHA1-203ENST00000504120 BAG1Q99933 345 aaPredicted RBP18.62■□□□□ 0.57
PCDHA1-203ENST00000504120 PDE8AO60658 829 aa18.62■□□□□ 0.57
PCDHA1-203ENST00000504120 ZNF174Q15697 407 aa18.62■□□□□ 0.57
PCDHA1-203ENST00000504120 XAGE2Q96GT9 111 aa18.62■□□□□ 0.57
PCDHA1-203ENST00000504120 RBM17Q96I25 401 aaKnown RBP18.62■□□□□ 0.57
PCDHA1-203ENST00000504120 UBAP1LF5GYI3 381 aa18.62■□□□□ 0.57
PCDHA1-203ENST00000504120 HSPA4P34932 840 aa18.62■□□□□ 0.57
PCDHA1-203ENST00000504120 SPATA31E1Q6ZUB1 1445 aa18.62■□□□□ 0.57
PCDHA1-203ENST00000504120 KIF4AO95239 1232 aa18.61■□□□□ 0.57
PCDHA1-203ENST00000504120 PREX2Q70Z35 1606 aa18.61■□□□□ 0.57
PCDHA1-203ENST00000504120 TMEM2Q9UHN6 1383 aa18.61■□□□□ 0.57
PCDHA1-203ENST00000504120 TRIM14Q14142 442 aa18.61■□□□□ 0.57
PCDHA1-203ENST00000504120 USP19O94966 1318 aa18.61■□□□□ 0.57
PCDHA1-203ENST00000504120 TEX11Q8IYF3 940 aa18.61■□□□□ 0.57
PCDHA1-203ENST00000504120 KBTBD3Q8NAB2 608 aa18.61■□□□□ 0.57
PCDHA1-203ENST00000504120 TIGD1Q96MW7 591 aa18.61■□□□□ 0.57
PCDHA1-203ENST00000504120 LETM2Q2VYF4 491 aa18.6■□□□□ 0.57
PCDHA1-203ENST00000504120 PPM1EQ8WY54 764 aa18.6■□□□□ 0.57
PCDHA1-203ENST00000504120 CAPZA3Q96KX2 299 aa18.6■□□□□ 0.57
PCDHA1-203ENST00000504120 CLSTN2Q9H4D0 955 aa18.6■□□□□ 0.57
PCDHA1-203ENST00000504120 KCNH3Q9ULD8 1083 aa18.6■□□□□ 0.57
PCDHA1-203ENST00000504120 EEF2P13639 858 aaKnown RBP18.6■□□□□ 0.57
PCDHA1-203ENST00000504120 VAV2P52735 878 aa18.6■□□□□ 0.57
PCDHA1-203ENST00000504120 KIF24Q5T7B8 1368 aa18.6■□□□□ 0.57
PCDHA1-203ENST00000504120 HIBADHP31937 336 aaKnown RBP18.6■□□□□ 0.57
PCDHA1-203ENST00000504120 GSTA5Q7RTV2 222 aa18.6■□□□□ 0.57
PCDHA1-203ENST00000504120 TTC14Q96N46 770 aa18.6■□□□□ 0.57
PCDHA1-203ENST00000504120 PLIN2Q99541 437 aa18.6■□□□□ 0.57
PCDHA1-203ENST00000504120 SH2D4AQ9H788 454 aa18.6■□□□□ 0.57
PCDHA1-203ENST00000504120 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.6■□□□□ 0.57
PCDHA1-203ENST00000504120 V9GYY5 206 aaPredicted RBP18.6■□□□□ 0.57
PCDHA1-203ENST00000504120 TNNC1P63316 161 aa18.6■□□□□ 0.57
PCDHA1-203ENST00000504120 GRIPAP1Q4V328 841 aa18.6■□□□□ 0.57
PCDHA1-203ENST00000504120 CERS3Q8IU89 383 aa18.6■□□□□ 0.57
PCDHA1-203ENST00000504120 SLC52A2Q9HAB3 445 aa18.6■□□□□ 0.57
PCDHA1-203ENST00000504120 TFCP2L1Q9NZI6 479 aa18.6■□□□□ 0.57
PCDHA1-203ENST00000504120 MSANTD4Q8NCY6 345 aa18.59■□□□□ 0.57
PCDHA1-203ENST00000504120 RIMBP2O15034 1052 aa18.59■□□□□ 0.57
PCDHA1-203ENST00000504120 GPAA1O43292 621 aa18.59■□□□□ 0.57
PCDHA1-203ENST00000504120 ATRIPQ8WXE1 791 aa18.59■□□□□ 0.57
PCDHA1-203ENST00000504120 CEP63Q96MT8 703 aa18.59■□□□□ 0.57
PCDHA1-203ENST00000504120 ARMT1Q9H993 441 aa18.59■□□□□ 0.57
PCDHA1-203ENST00000504120 CUTAO60888 179 aa18.59■□□□□ 0.57
PCDHA1-203ENST00000504120 NCBP1Q09161 790 aaKnown RBP18.59■□□□□ 0.57
PCDHA1-203ENST00000504120 PPP2R5BQ15173 497 aa18.59■□□□□ 0.57
PCDHA1-203ENST00000504120 TRAPPC3LQ5T215 181 aa18.59■□□□□ 0.57
PCDHA1-203ENST00000504120 MLH3Q9UHC1 1453 aa18.59■□□□□ 0.57
PCDHA1-203ENST00000504120 FBF1Q8TES7 1133 aa18.58■□□□□ 0.57
PCDHA1-203ENST00000504120 FAM227BQ96M60 508 aa18.58■□□□□ 0.57
PCDHA1-203ENST00000504120 PABPN1LA6NDY0 278 aaKnown RBP18.58■□□□□ 0.57
PCDHA1-203ENST00000504120 TMEM110-MUSTN1A8MSY1 372 aa18.58■□□□□ 0.57
PCDHA1-203ENST00000504120 CCDC122Q5T0U0 273 aa18.58■□□□□ 0.57
PCDHA1-203ENST00000504120 GLT8D2Q9H1C3 349 aa18.58■□□□□ 0.56
PCDHA1-203ENST00000504120 CNNM4Q6P4Q7 775 aa18.58■□□□□ 0.56
PCDHA1-203ENST00000504120 ARFGAP2Q8N6H7 521 aa18.58■□□□□ 0.56
PCDHA1-203ENST00000504120 JDP2Q8WYK2 163 aa18.58■□□□□ 0.56
PCDHA1-203ENST00000504120 SUCLG2Q96I99 432 aa18.58■□□□□ 0.56
PCDHA1-203ENST00000504120 CEP83Q9Y592 693 aa18.58■□□□□ 0.56
PCDHA1-203ENST00000504120 GNPATO15228 680 aa18.58■□□□□ 0.56
PCDHA1-203ENST00000504120 TICAM2Q86XR7 235 aa18.58■□□□□ 0.56
PCDHA1-203ENST00000504120 CNBD1Q8NA66 436 aa18.58■□□□□ 0.56
PCDHA1-203ENST00000504120 NOC4LQ9BVI4 516 aaKnown RBP18.58■□□□□ 0.56
PCDHA1-203ENST00000504120 RBSNQ9H1K0 784 aa18.58■□□□□ 0.56
PCDHA1-203ENST00000504120 BTG4Q9NY30 223 aa18.58■□□□□ 0.56
PCDHA1-203ENST00000504120 CTNND2Q9UQB3 1225 aa18.58■□□□□ 0.56
PCDHA1-203ENST00000504120 TTC37Q6PGP7 1564 aa18.57■□□□□ 0.56
PCDHA1-203ENST00000504120 VWA3BQ502W6 1294 aa18.57■□□□□ 0.56
PCDHA1-203ENST00000504120 CCDC50Q8IVM0 306 aa18.57■□□□□ 0.56
PCDHA1-203ENST00000504120 KIAA0232Q92628 1395 aa18.57■□□□□ 0.56
PCDHA1-203ENST00000504120 TRAF5O00463 557 aa18.57■□□□□ 0.56
PCDHA1-203ENST00000504120 GJC1P36383 396 aa18.57■□□□□ 0.56
PCDHA1-203ENST00000504120 GCKRQ14397 625 aa18.57■□□□□ 0.56
PCDHA1-203ENST00000504120 ANKS4BQ8N8V4 417 aa18.57■□□□□ 0.56
PCDHA1-203ENST00000504120 KLHDC4Q8TBB5 520 aa18.57■□□□□ 0.56
PCDHA1-203ENST00000504120 MTRF1LQ9UGC7 380 aaKnown RBP18.57■□□□□ 0.56
PCDHA1-203ENST00000504120 RSPH14Q9UHP6 348 aa18.57■□□□□ 0.56
PCDHA1-203ENST00000504120 FRMD4BQ9Y2L6 1034 aa18.57■□□□□ 0.56
PCDHA1-203ENST00000504120 ATP6V0A2Q9Y487 856 aa18.57■□□□□ 0.56
PCDHA1-203ENST00000504120 PLCB3Q01970 1234 aa18.57■□□□□ 0.56
PCDHA1-203ENST00000504120 PLS1Q14651 629 aa18.57■□□□□ 0.56
PCDHA1-203ENST00000504120 IGSF22Q8N9C0 903 aa18.57■□□□□ 0.56
PCDHA1-203ENST00000504120 LPIN2Q92539 896 aa18.57■□□□□ 0.56
PCDHA1-203ENST00000504120 PAIP2Q9BPZ3 127 aaKnown RBP18.57■□□□□ 0.56
PCDHA1-203ENST00000504120 JAG2Q9Y219 1238 aa18.57■□□□□ 0.56
PCDHA1-203ENST00000504120 KDM5AP29375 1690 aaKnown RBP18.57■□□□□ 0.56
PCDHA1-203ENST00000504120 PNMA6EA0A0J9YXQ4 647 aa18.57■□□□□ 0.56
PCDHA1-203ENST00000504120 LGR6Q9HBX8 967 aa18.57■□□□□ 0.56
PCDHA1-203ENST00000504120 EPB41P11171 864 aaKnown RBP18.56■□□□□ 0.56
PCDHA1-203ENST00000504120 PDE4DQ08499 809 aa18.56■□□□□ 0.56
PCDHA1-203ENST00000504120 TBC1D8BQ0IIM8 1120 aa18.56■□□□□ 0.56
PCDHA1-203ENST00000504120 DIS3L2Q8IYB7 885 aaKnown RBP18.56■□□□□ 0.56
PCDHA1-203ENST00000504120 MTUS1Q9ULD2 1270 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms