RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 KIF9Q9HAQ2 790 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 CD248Q9HCU0 757 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 HYPKQ9NX55 129 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 MYO1AQ9UBC5 1043 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 SNX14Q9Y5W7 946 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 SPHKAPQ2M3C7 1700 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 NUP153P49790 1475 aaKnown RBP6.78□□□□□ -1.32
LINC01340-201ENST00000504012 PTPRTO14522 1441 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 ABCC3O15438 1527 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 KNDC1Q76NI1 1749 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 A6NHS1 94 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 ANKRD65E5RJM6 399 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 FANCGO15287 622 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 GTPBP6O43824 516 aaPredicted RBP6.77□□□□□ -1.33
LINC01340-201ENST00000504012 ONECUT3O60422 494 aaPredicted RBP6.77□□□□□ -1.33
LINC01340-201ENST00000504012 NR1I2O75469 434 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 WDHD1O75717 1129 aaPredicted RBP6.77□□□□□ -1.33
LINC01340-201ENST00000504012 U2AF1L5P0DN76 240 aaPredicted RBP6.77□□□□□ -1.33
LINC01340-201ENST00000504012 GBP2P32456 591 aaPredicted RBP6.77□□□□□ -1.33
LINC01340-201ENST00000504012 U2AF1Q01081 240 aaKnown RBP eCLIP6.77□□□□□ -1.33
LINC01340-201ENST00000504012 STIM1Q13586 685 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 NAA25Q14CX7 972 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 ZRSR2Q15696 482 aaKnown RBP6.77□□□□□ -1.33
LINC01340-201ENST00000504012 CCDC57Q2TAC2 916 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 LONRF3Q496Y0 759 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 HHATQ5VTY9 493 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 MIS18BP1Q6P0N0 1132 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 SLC30A9Q6PML9 568 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 C6orf89Q6UWU4 347 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 RINLQ6ZS11 566 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 SPATA21Q7Z572 469 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 TEX9Q8N6V9 391 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 ENGASEQ8NFI3 743 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 COG1Q8WTW3 980 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 EZH1Q92800 747 aaPredicted RBP6.77□□□□□ -1.33
LINC01340-201ENST00000504012 SPDL1Q96EA4 605 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 PGBD1Q96JS3 809 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 PLEKHG4BQ96PX9 1271 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 NAA15Q9BXJ9 866 aaKnown RBP6.77□□□□□ -1.33
LINC01340-201ENST00000504012 XPO4Q9C0E2 1151 aaKnown RBP6.77□□□□□ -1.33
LINC01340-201ENST00000504012 IQCGQ9H095 443 aaKnown RBP6.77□□□□□ -1.33
LINC01340-201ENST00000504012 KAT14Q9H8E8 782 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 GPBP1L1Q9HC44 474 aaPredicted RBP6.77□□□□□ -1.33
LINC01340-201ENST00000504012 ZSWIM6Q9HCJ5 1215 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 SLC40A1Q9NP59 571 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 ANO2Q9NQ90 1003 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 BLOC1S6Q9UL45 172 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 HPCAL4Q9UM19 191 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 NUB1Q9Y5A7 615 aa6.77□□□□□ -1.33
LINC01340-201ENST00000504012 CDK12Q9NYV4 1490 aaPredicted RBP6.77□□□□□ -1.33
LINC01340-201ENST00000504012 INO80Q9ULG1 1556 aaPredicted RBP6.77□□□□□ -1.33
LINC01340-201ENST00000504012 CPSF1Q10570 1443 aaKnown RBP6.76□□□□□ -1.33
LINC01340-201ENST00000504012 TOPBP1Q92547 1522 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 RAPGEF6Q8TEU7 1601 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 CTAGE15A4D2H0 777 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 EME2A4GXA9 379 aaPredicted RBP6.76□□□□□ -1.33
LINC01340-201ENST00000504012 UNCXA6NJT0 531 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 LRRIQ3A6PVS8 624 aaPredicted RBP6.76□□□□□ -1.33
LINC01340-201ENST00000504012 MYO1FO00160 1098 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 BIN1O00499 593 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 ZSCAN9O15535 394 aaPredicted RBP6.76□□□□□ -1.33
LINC01340-201ENST00000504012 AP1G2O75843 785 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 SMNDC1O75940 238 aaKnown RBP eCLIP6.76□□□□□ -1.33
LINC01340-201ENST00000504012 LUC7L3O95232 432 aaKnown RBP6.76□□□□□ -1.33
LINC01340-201ENST00000504012 CTAGE8P0CG41 777 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 GHRP10912 638 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 ALDH1B1P30837 517 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 NAP1L1P55209 391 aaKnown RBP6.76□□□□□ -1.33
LINC01340-201ENST00000504012 CCT2P78371 535 aaKnown RBP6.76□□□□□ -1.33
LINC01340-201ENST00000504012 APBA1Q02410 837 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 FAM160A1Q05DH4 1040 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 TBX2Q13207 712 aaPredicted RBP6.76□□□□□ -1.33
LINC01340-201ENST00000504012 DYNC1I2Q13409 638 aaKnown RBP6.76□□□□□ -1.33
LINC01340-201ENST00000504012 XRCC4Q13426 336 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 ALS2CLQ60I27 953 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 NFXL1Q6ZNB6 911 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 CCDC73Q6ZRK6 1079 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 APBB1IPQ7Z5R6 666 aaPredicted RBP6.76□□□□□ -1.33
LINC01340-201ENST00000504012 CTAGE6Q86UF2 777 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 ARHGEF25Q86VW2 580 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 TMEM139Q8IV31 216 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 VSTM4Q8IW00 320 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 CTAGE4Q8IX94 777 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 SDR16C5Q8N3Y7 309 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 AOPEPQ8N6M6 819 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 FAM81AQ8TBF8 368 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 KCNV2Q8TDN2 545 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 LZICQ8WZA0 190 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 DHX58Q96C10 678 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 AGAP3Q96P47 875 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 SPAG5Q96R06 1193 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 WDR24Q96S15 920 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 PNKPQ96T60 521 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 SLX1AQ9BQ83 275 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 EPC1Q9H2F5 836 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 KDM4CQ9H3R0 1056 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 IFNKQ9P0W0 207 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 STAG3Q9UJ98 1225 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 GLI2P10070 1586 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 CDC42BPGQ6DT37 1551 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms