RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 TMEM87BQ96K49 555 aa25.09■■□□□ 1.61
UBE2D3-216ENST00000503742 ANKIB1Q9P2G1 1089 aa25.09■■□□□ 1.61
UBE2D3-216ENST00000503742 C15orf52Q6ZUT6 534 aaKnown RBP25.08■■□□□ 1.61
UBE2D3-216ENST00000503742 CNNM2Q9H8M5 875 aa25.08■■□□□ 1.61
UBE2D3-216ENST00000503742 INCENPQ9NQS7 918 aa25.08■■□□□ 1.61
UBE2D3-216ENST00000503742 MAST2Q6P0Q8 1798 aa25.08■■□□□ 1.61
UBE2D3-216ENST00000503742 GOLGA8BA8MQT2 603 aa25.07■■□□□ 1.6
UBE2D3-216ENST00000503742 RESTQ13127 1097 aa25.07■■□□□ 1.6
UBE2D3-216ENST00000503742 TMED8Q6PL24 325 aaPredicted RBP25.07■■□□□ 1.6
UBE2D3-216ENST00000503742 IGDCC4Q8TDY8 1250 aa25.07■■□□□ 1.6
UBE2D3-216ENST00000503742 AKT1S1Q96B36 256 aa25.07■■□□□ 1.6
UBE2D3-216ENST00000503742 KLRG2A4D1S0 409 aaPredicted RBP25.07■■□□□ 1.6
UBE2D3-216ENST00000503742 HOXA10P31260 410 aaPredicted RBP25.07■■□□□ 1.6
UBE2D3-216ENST00000503742 KRT85P78386 507 aa25.07■■□□□ 1.6
UBE2D3-216ENST00000503742 ZNF827Q17R98 1081 aa25.07■■□□□ 1.6
UBE2D3-216ENST00000503742 H3BQV1 296 aa25.06■■□□□ 1.6
UBE2D3-216ENST00000503742 DHX16O60231 1041 aaKnown RBP25.06■■□□□ 1.6
UBE2D3-216ENST00000503742 FDPSP14324 419 aaKnown RBP25.06■■□□□ 1.6
UBE2D3-216ENST00000503742 MECOMQ03112 1051 aa25.06■■□□□ 1.6
UBE2D3-216ENST00000503742 IFFO2Q5TF58 517 aa25.06■■□□□ 1.6
UBE2D3-216ENST00000503742 RBM17Q96I25 401 aaKnown RBP25.06■■□□□ 1.6
UBE2D3-216ENST00000503742 KRT23Q9C075 422 aa25.06■■□□□ 1.6
UBE2D3-216ENST00000503742 FAM173BQ6P4H8 233 aa25.05■■□□□ 1.6
UBE2D3-216ENST00000503742 MFSD6Q6ZSS7 791 aa25.05■■□□□ 1.6
UBE2D3-216ENST00000503742 SDR42E1Q8WUS8 393 aa25.05■■□□□ 1.6
UBE2D3-216ENST00000503742 ZSCAN16Q9H4T2 348 aaPredicted RBP25.05■■□□□ 1.6
UBE2D3-216ENST00000503742 ANAPC4Q9UJX5 808 aa25.05■■□□□ 1.6
UBE2D3-216ENST00000503742 CCDC88AQ3V6T2 1871 aa25.05■■□□□ 1.6
UBE2D3-216ENST00000503742 DYNLL1P63167 89 aaKnown RBP25.05■■□□□ 1.6
UBE2D3-216ENST00000503742 SGMS1Q86VZ5 419 aa25.05■■□□□ 1.6
UBE2D3-216ENST00000503742 ZSWIM5Q9P217 1185 aa25.05■■□□□ 1.6
UBE2D3-216ENST00000503742 PPARAQ07869 468 aa25.04■■□□□ 1.6
UBE2D3-216ENST00000503742 CHAF1AQ13111 956 aaPredicted RBP25.04■■□□□ 1.6
UBE2D3-216ENST00000503742 TDRD7Q8NHU6 1098 aaKnown RBP25.04■■□□□ 1.6
UBE2D3-216ENST00000503742 SYAP1Q96A49 352 aaPredicted RBP25.04■■□□□ 1.6
UBE2D3-216ENST00000503742 BRIP1Q9BX63 1249 aa25.04■■□□□ 1.6
UBE2D3-216ENST00000503742 LY9Q9HBG7 655 aa25.04■■□□□ 1.6
UBE2D3-216ENST00000503742 ELP1O95163 1332 aa25.04■■□□□ 1.6
UBE2D3-216ENST00000503742 KIAA1551Q9HCM1 1747 aa25.04■■□□□ 1.6
UBE2D3-216ENST00000503742 IGSF3O75054 1194 aa25.04■■□□□ 1.6
UBE2D3-216ENST00000503742 KDM4AO75164 1064 aa25.04■■□□□ 1.6
UBE2D3-216ENST00000503742 APBA3O96018 575 aa25.04■■□□□ 1.6
UBE2D3-216ENST00000503742 PRDX5P30044 214 aa25.04■■□□□ 1.6
UBE2D3-216ENST00000503742 LIFRP42702 1097 aa25.04■■□□□ 1.6
UBE2D3-216ENST00000503742 GPSM2P81274 684 aa25.04■■□□□ 1.6
UBE2D3-216ENST00000503742 BBOX1O75936 387 aa25.03■■□□□ 1.6
UBE2D3-216ENST00000503742 GIMAP6Q6P9H5 292 aa25.03■■□□□ 1.6
UBE2D3-216ENST00000503742 TTC6Q86TZ1 520 aa25.03■■□□□ 1.6
UBE2D3-216ENST00000503742 CRAMP1Q96RY5 1269 aa25.03■■□□□ 1.6
UBE2D3-216ENST00000503742 SENP2Q9HC62 589 aa25.03■■□□□ 1.6
UBE2D3-216ENST00000503742 NRXN2Q9P2S2 1712 aa25.03■■□□□ 1.6
UBE2D3-216ENST00000503742 APOA5Q6Q788 366 aa25.02■■□□□ 1.6
UBE2D3-216ENST00000503742 COL23A1Q86Y22 540 aaPredicted RBP25.02■■□□□ 1.6
UBE2D3-216ENST00000503742 RNF41Q9H4P4 317 aaPredicted RBP25.02■■□□□ 1.6
UBE2D3-216ENST00000503742 MTA3Q9BTC8 594 aa25.02■■□□□ 1.6
UBE2D3-216ENST00000503742 PANK2Q9BZ23 570 aa25.02■■□□□ 1.6
UBE2D3-216ENST00000503742 SCAND2PQ9GZW5 306 aaPredicted RBP25.02■■□□□ 1.6
UBE2D3-216ENST00000503742 MYH15Q9Y2K3 1946 aa25.01■■□□□ 1.59
UBE2D3-216ENST00000503742 ANKRD31Q8N7Z5 1873 aa25.01■■□□□ 1.59
UBE2D3-216ENST00000503742 TMEM67Q5HYA8 995 aa25.01■■□□□ 1.59
UBE2D3-216ENST00000503742 SPTY2D1Q68D10 685 aaPredicted RBP25.01■■□□□ 1.59
UBE2D3-216ENST00000503742 LRSAM1Q6UWE0 723 aa25.01■■□□□ 1.59
UBE2D3-216ENST00000503742 BAZ2AQ9UIF9 1905 aaKnown RBP25.01■■□□□ 1.59
UBE2D3-216ENST00000503742 LRRC37AA6NMS7 1700 aa25■■□□□ 1.59
UBE2D3-216ENST00000503742 SYCE3A1L190 88 aa25■■□□□ 1.59
UBE2D3-216ENST00000503742 ATP2B4P23634 1241 aa25■■□□□ 1.59
UBE2D3-216ENST00000503742 ZNF804AQ7Z570 1209 aa25■■□□□ 1.59
UBE2D3-216ENST00000503742 RAB11FIP4Q86YS3 637 aa25■■□□□ 1.59
UBE2D3-216ENST00000503742 NLGN1Q8N2Q7 840 aa25■■□□□ 1.59
UBE2D3-216ENST00000503742 WDR66Q8TBY9 1149 aa25■■□□□ 1.59
UBE2D3-216ENST00000503742 RXRBP28702 533 aa25■■□□□ 1.59
UBE2D3-216ENST00000503742 PODXL2Q9NZ53 605 aa25■■□□□ 1.59
UBE2D3-216ENST00000503742 IFIT3O14879 490 aaKnown RBP24.99■■□□□ 1.59
UBE2D3-216ENST00000503742 PPFIA3O75145 1194 aa24.99■■□□□ 1.59
UBE2D3-216ENST00000503742 METAP2P50579 478 aaKnown RBP eCLIP24.99■■□□□ 1.59
UBE2D3-216ENST00000503742 CPLX1O14810 134 aa24.98■■□□□ 1.59
UBE2D3-216ENST00000503742 JAG2Q9Y219 1238 aa24.98■■□□□ 1.59
UBE2D3-216ENST00000503742 LTBP1Q14766 1721 aa24.98■■□□□ 1.59
UBE2D3-216ENST00000503742 TNS1Q9HBL0 1735 aaKnown RBP24.98■■□□□ 1.59
UBE2D3-216ENST00000503742 MINDY4BA8MYZ0 360 aa24.98■■□□□ 1.59
UBE2D3-216ENST00000503742 FLAD1Q8NFF5 587 aa24.98■■□□□ 1.59
UBE2D3-216ENST00000503742 GPR101Q96P66 508 aaPredicted RBP24.98■■□□□ 1.59
UBE2D3-216ENST00000503742 AATFQ9NY61 560 aaKnown RBP eCLIP24.98■■□□□ 1.596e-12■■□□□ 12.2
UBE2D3-216ENST00000503742 TFIP11Q9UBB9 837 aaKnown RBP24.98■■□□□ 1.59
UBE2D3-216ENST00000503742 ORC3Q9UBD5 711 aaPredicted RBP24.98■■□□□ 1.59
UBE2D3-216ENST00000503742 GGA1Q9UJY5 639 aa24.98■■□□□ 1.59
UBE2D3-216ENST00000503742 NID2Q14112 1375 aa24.97■■□□□ 1.59
UBE2D3-216ENST00000503742 ZBTB43O43298 467 aa24.97■■□□□ 1.59
UBE2D3-216ENST00000503742 UFL1O94874 794 aa24.97■■□□□ 1.59
UBE2D3-216ENST00000503742 FGRP09769 529 aa24.97■■□□□ 1.59
UBE2D3-216ENST00000503742 ADD1P35611 737 aaKnown RBP24.97■■□□□ 1.59
UBE2D3-216ENST00000503742 RRP12Q5JTH9 1297 aaKnown RBP24.97■■□□□ 1.59
UBE2D3-216ENST00000503742 RGS22Q8NE09 1264 aa24.97■■□□□ 1.59
UBE2D3-216ENST00000503742 LEO1Q8WVC0 666 aaPredicted RBP24.97■■□□□ 1.59
UBE2D3-216ENST00000503742 FOSBP53539 338 aa24.96■■□□□ 1.59
UBE2D3-216ENST00000503742 CCDC183Q5T5S1 534 aa24.96■■□□□ 1.59
UBE2D3-216ENST00000503742 TMC4Q7Z404 712 aa24.96■■□□□ 1.59
UBE2D3-216ENST00000503742 CRNKL1Q9BZJ0 848 aaKnown RBP24.96■■□□□ 1.59
UBE2D3-216ENST00000503742 RGPD3A6NKT7 1758 aaPredicted RBP24.96■■□□□ 1.59
UBE2D3-216ENST00000503742 RGPD4Q7Z3J3 1758 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 185.8 ms