RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 ZSWIM5Q9P217 1185 aa26.31■■□□□ 1.8
PCDH1-204ENST00000503492 TDO2P48775 406 aa26.3■■□□□ 1.8
PCDH1-204ENST00000503492 MAP3K11Q16584 847 aa26.3■■□□□ 1.8
PCDH1-204ENST00000503492 HS1BP3Q53T59 392 aa26.3■■□□□ 1.8
PCDH1-204ENST00000503492 ZNF396Q96N95 335 aaPredicted RBP26.3■■□□□ 1.8
PCDH1-204ENST00000503492 NACAP1Q9BZK3 213 aa26.3■■□□□ 1.8
PCDH1-204ENST00000503492 LY9Q9HBG7 655 aa26.3■■□□□ 1.8
PCDH1-204ENST00000503492 DDX19AQ9NUU7 478 aaKnown RBP26.3■■□□□ 1.8
PCDH1-204ENST00000503492 NR1I2O75469 434 aa26.29■■□□□ 1.8
PCDH1-204ENST00000503492 METAP2P50579 478 aaKnown RBP eCLIP26.29■■□□□ 1.8
PCDH1-204ENST00000503492 TPTE2Q6XPS3 522 aa26.29■■□□□ 1.8
PCDH1-204ENST00000503492 RAI14Q9P0K7 980 aa26.29■■□□□ 1.8
PCDH1-204ENST00000503492 KDM4AO75164 1064 aa26.29■■□□□ 1.8
PCDH1-204ENST00000503492 RXRAP19793 462 aa26.29■■□□□ 1.8
PCDH1-204ENST00000503492 FBXO18Q8NFZ0 1043 aa26.29■■□□□ 1.8
PCDH1-204ENST00000503492 TMEM67Q5HYA8 995 aa26.28■■□□□ 1.8
PCDH1-204ENST00000503492 ZSCAN30Q86W11 494 aa26.28■■□□□ 1.8
PCDH1-204ENST00000503492 VPS37DQ86XT2 251 aa26.28■■□□□ 1.8
PCDH1-204ENST00000503492 GJB4Q9NTQ9 266 aa26.28■■□□□ 1.8
PCDH1-204ENST00000503492 SBF2Q86WG5 1849 aa26.28■■□□□ 1.8
PCDH1-204ENST00000503492 KLRK1P26718 216 aa26.28■■□□□ 1.8
PCDH1-204ENST00000503492 SGMS1Q86VZ5 419 aa26.28■■□□□ 1.8
PCDH1-204ENST00000503492 TNMDQ9H2S6 317 aa26.28■■□□□ 1.8
PCDH1-204ENST00000503492 CLSTN2Q9H4D0 955 aa26.28■■□□□ 1.8
PCDH1-204ENST00000503492 CNNM2Q9H8M5 875 aa26.28■■□□□ 1.8
PCDH1-204ENST00000503492 CCDC192P0DO97 292 aa26.27■■□□□ 1.8
PCDH1-204ENST00000503492 CDC27P30260 824 aa26.27■■□□□ 1.8
PCDH1-204ENST00000503492 MFSD6Q6ZSS7 791 aa26.27■■□□□ 1.8
PCDH1-204ENST00000503492 FBXO33Q7Z6M2 555 aa26.27■■□□□ 1.8
PCDH1-204ENST00000503492 STAG1Q8WVM7 1258 aa26.27■■□□□ 1.8
PCDH1-204ENST00000503492 CACNA1SQ13698 1873 aa26.27■■□□□ 1.8
PCDH1-204ENST00000503492 MEX3CQ5U5Q3 659 aaKnown RBP26.27■■□□□ 1.8
PCDH1-204ENST00000503492 KRT23Q9C075 422 aa26.27■■□□□ 1.8
PCDH1-204ENST00000503492 LIFRP42702 1097 aa26.26■■□□□ 1.79
PCDH1-204ENST00000503492 MICU3Q86XE3 530 aa26.26■■□□□ 1.79
PCDH1-204ENST00000503492 MAGEB6P1A0A0J9YX57 407 aa26.26■■□□□ 1.79
PCDH1-204ENST00000503492 IFIT3O14879 490 aaKnown RBP26.26■■□□□ 1.79
PCDH1-204ENST00000503492 ZBTB43O43298 467 aa26.26■■□□□ 1.79
PCDH1-204ENST00000503492 TM4SF1P30408 202 aa26.26■■□□□ 1.79
PCDH1-204ENST00000503492 NFXL1Q6ZNB6 911 aa26.26■■□□□ 1.79
PCDH1-204ENST00000503492 RBM43Q6ZSC3 357 aaKnown RBP26.26■■□□□ 1.79
PCDH1-204ENST00000503492 CKAP2LQ8IYA6 745 aa26.25■■□□□ 1.79
PCDH1-204ENST00000503492 SDR42E1Q8WUS8 393 aa26.25■■□□□ 1.79
PCDH1-204ENST00000503492 USP25Q9UHP3 1055 aa26.25■■□□□ 1.79
PCDH1-204ENST00000503492 CCDC144CPQ8IYA2 1237 aa26.25■■□□□ 1.79
PCDH1-204ENST00000503492 RIOK1Q9BRS2 568 aaKnown RBP26.25■■□□□ 1.79
PCDH1-204ENST00000503492 MYL10Q9BUA6 226 aa26.25■■□□□ 1.79
PCDH1-204ENST00000503492 FAM217BQ9NTX9 383 aaPredicted RBP26.25■■□□□ 1.79
PCDH1-204ENST00000503492 RRP12Q5JTH9 1297 aaKnown RBP26.24■■□□□ 1.79
PCDH1-204ENST00000503492 ZNF384Q8TF68 577 aa26.24■■□□□ 1.79
PCDH1-204ENST00000503492 AFF2P51816 1311 aa26.24■■□□□ 1.79
PCDH1-204ENST00000503492 TYRO3Q06418 890 aa26.24■■□□□ 1.79
PCDH1-204ENST00000503492 STK11IPQ8N1F8 1099 aa26.24■■□□□ 1.79
PCDH1-204ENST00000503492 AIFM3Q96NN9 605 aa26.24■■□□□ 1.79
PCDH1-204ENST00000503492 RFC4P35249 363 aa26.23■■□□□ 1.79
PCDH1-204ENST00000503492 NTRK3Q16288 839 aa26.23■■□□□ 1.79
PCDH1-204ENST00000503492 TRAPPC3LQ5T215 181 aa26.23■■□□□ 1.79
PCDH1-204ENST00000503492 ANKRD2Q9GZV1 360 aa26.23■■□□□ 1.79
PCDH1-204ENST00000503492 MRVI1Q9Y6F6 885 aa26.23■■□□□ 1.79
PCDH1-204ENST00000503492 GOLGA8AA7E2F4 631 aa26.22■■□□□ 1.79
PCDH1-204ENST00000503492 ONECUT3O60422 494 aaPredicted RBP26.22■■□□□ 1.79
PCDH1-204ENST00000503492 CDKL5O76039 1030 aa26.22■■□□□ 1.79
PCDH1-204ENST00000503492 POLR3DP05423 398 aaPredicted RBP26.22■■□□□ 1.79
PCDH1-204ENST00000503492 PPARAQ07869 468 aa26.22■■□□□ 1.79
PCDH1-204ENST00000503492 FAM196AQ6ZSG2 479 aa26.22■■□□□ 1.79
PCDH1-204ENST00000503492 CCAR1Q8IX12 1150 aaKnown RBP26.22■■□□□ 1.79
PCDH1-204ENST00000503492 TOMM22Q9NS69 142 aa26.22■■□□□ 1.79
PCDH1-204ENST00000503492 RTEL1Q9NZ71 1219 aa26.22■■□□□ 1.79
PCDH1-204ENST00000503492 TNRC6CQ9HCJ0 1690 aaKnown RBP26.22■■□□□ 1.79
PCDH1-204ENST00000503492 KIF28PB7ZC32 967 aa26.22■■□□□ 1.79
PCDH1-204ENST00000503492 SEMA3EO15041 775 aa26.22■■□□□ 1.79
PCDH1-204ENST00000503492 PHKBQ93100 1093 aa26.22■■□□□ 1.79
PCDH1-204ENST00000503492 GOLPH3LQ9H4A5 285 aa26.22■■□□□ 1.79
PCDH1-204ENST00000503492 TFCP2L1Q9NZI6 479 aa26.22■■□□□ 1.79
PCDH1-204ENST00000503492 NOL7Q9UMY1 257 aaKnown RBP26.22■■□□□ 1.79
PCDH1-204ENST00000503492 DYNLL1P63167 89 aaKnown RBP26.21■■□□□ 1.79
PCDH1-204ENST00000503492 ALG1Q9BT22 464 aa26.21■■□□□ 1.79
PCDH1-204ENST00000503492 SLC12A7Q9Y666 1083 aa26.21■■□□□ 1.79
PCDH1-204ENST00000503492 CCDC69A6NI79 296 aa26.21■■□□□ 1.79
PCDH1-204ENST00000503492 KIF23Q02241 960 aaPredicted RBP26.21■■□□□ 1.79
PCDH1-204ENST00000503492 CPLX2Q6PUV4 134 aaKnown RBP26.21■■□□□ 1.79
PCDH1-204ENST00000503492 BRAPQ7Z569 592 aa26.21■■□□□ 1.79
PCDH1-204ENST00000503492 SEPT12Q8IYM1 358 aa26.21■■□□□ 1.79
PCDH1-204ENST00000503492 RGS22Q8NE09 1264 aa26.21■■□□□ 1.79
PCDH1-204ENST00000503492 ZKSCAN3Q9BRR0 538 aa26.21■■□□□ 1.79
PCDH1-204ENST00000503492 LRRC4BQ9NT99 713 aa26.21■■□□□ 1.79
PCDH1-204ENST00000503492 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.21■■□□□ 1.79
PCDH1-204ENST00000503492 RANBP6O60518 1105 aaKnown RBP26.2■■□□□ 1.79
PCDH1-204ENST00000503492 RNF41Q9H4P4 317 aaPredicted RBP26.2■■□□□ 1.79
PCDH1-204ENST00000503492 CCDC39Q9UFE4 941 aa26.2■■□□□ 1.79
PCDH1-204ENST00000503492 HIBADHP31937 336 aaKnown RBP26.2■■□□□ 1.78
PCDH1-204ENST00000503492 MYSM1Q5VVJ2 828 aa26.2■■□□□ 1.78
PCDH1-204ENST00000503492 CLIC4Q9Y696 253 aa26.2■■□□□ 1.78
PCDH1-204ENST00000503492 MINDY4BA8MYZ0 360 aa26.19■■□□□ 1.78
PCDH1-204ENST00000503492 SMIM22K7EJ46 135 aa26.19■■□□□ 1.78
PCDH1-204ENST00000503492 ME1P48163 572 aa26.19■■□□□ 1.78
PCDH1-204ENST00000503492 NFIXQ14938 502 aa26.19■■□□□ 1.78
PCDH1-204ENST00000503492 ANAPC4Q9UJX5 808 aa26.19■■□□□ 1.78
PCDH1-204ENST00000503492 NPHP1O15259 732 aa26.19■■□□□ 1.78
PCDH1-204ENST00000503492 ADCY5O95622 1261 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms