RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 DDX54Q8TDD1 881 aaKnown RBP5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 NLRP3Q96P20 1036 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 PLEKHF1Q96S99 279 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 INCENPQ9NQS7 918 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 ADCY5O95622 1261 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 IKQ13123 557 aaPredicted RBP5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 CTR9Q6PD62 1173 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 UBE3BQ7Z3V4 1068 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 XAGE3Q8WTP9 111 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 NUP133Q8WUM0 1156 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 RPGRQ92834 1020 aaKnown RBP5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 CABP5Q9NP86 173 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 STRN4Q9NRL3 753 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 CHPF2Q9P2E5 772 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 OPA1O60313 960 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 PDE8AO60658 829 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 TRIM37O94972 964 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 MPRIPQ6WCQ1 1025 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 CLEC17AQ6ZS10 378 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 TBC1D22AQ8WUA7 517 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 PPP1R9BQ96SB3 815 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 FERMT1Q9BQL6 677 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 SELENOOQ9BVL4 669 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 ALDH8A1Q9H2A2 487 aaPredicted RBP5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 RNF39Q9H2S5 420 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 SLC52A2Q9HAB3 445 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 COPRSQ9NQ92 184 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 FOXO3O43524 673 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 KDM4AO75164 1064 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 ZNF790Q6PG37 636 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 TPTE2Q6XPS3 522 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 GIGYF2Q6Y7W6 1299 aaKnown RBP5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 COPS6Q7L5N1 327 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 TTC6Q86TZ1 520 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 VSIG10Q8N0Z9 540 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 ALG1Q9BT22 464 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 THUMPD2Q9BTF0 503 aaKnown RBP5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 HDAC9Q9UKV0 1011 aa5.41□□□□□ -1.54
NDFIP1-202ENST00000503388 ATP8B1O43520 1251 aa5.4□□□□□ -1.54
NDFIP1-202ENST00000503388 KRT86O43790 486 aa5.4□□□□□ -1.54
NDFIP1-202ENST00000503388 BRD1O95696 1058 aa5.4□□□□□ -1.54
NDFIP1-202ENST00000503388 CCDC175P0C221 793 aa5.4□□□□□ -1.54
NDFIP1-202ENST00000503388 CDC25BP30305 580 aa5.4□□□□□ -1.54
NDFIP1-202ENST00000503388 GTF2F1P35269 517 aaKnown RBP eCLIP5.4□□□□□ -1.54
NDFIP1-202ENST00000503388 ZC3H6P61129 1189 aaKnown RBP5.4□□□□□ -1.54
NDFIP1-202ENST00000503388 ORC2Q13416 577 aaPredicted RBP5.4□□□□□ -1.54
NDFIP1-202ENST00000503388 PUM3Q15397 648 aaKnown RBP5.4□□□□□ -1.54
NDFIP1-202ENST00000503388 FOXD4L6Q3SYB3 417 aaPredicted RBP5.4□□□□□ -1.54
NDFIP1-202ENST00000503388 PPP1R2P3Q6NXS1 205 aa5.4□□□□□ -1.54
NDFIP1-202ENST00000503388 FOXD4L3Q6VB84 417 aaPredicted RBP5.4□□□□□ -1.54
NDFIP1-202ENST00000503388 CACNA2D4Q7Z3S7 1137 aa5.4□□□□□ -1.54
NDFIP1-202ENST00000503388 WDR66Q8TBY9 1149 aa5.4□□□□□ -1.54
NDFIP1-202ENST00000503388 CALR3Q96L12 384 aaKnown RBP5.4□□□□□ -1.54
NDFIP1-202ENST00000503388 TIGD1Q96MW7 591 aa5.4□□□□□ -1.54
NDFIP1-202ENST00000503388 NAP1L3Q99457 506 aaPredicted RBP5.4□□□□□ -1.54
NDFIP1-202ENST00000503388 CUEDC2Q9H467 287 aa5.4□□□□□ -1.54
NDFIP1-202ENST00000503388 TTF2Q9UNY4 1162 aaKnown RBP5.4□□□□□ -1.54
NDFIP1-202ENST00000503388 KLF18A0A0U1RQI7 1052 aa5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 A0A1W2PQ27 194 aa5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 A0A1W2PQ64 194 aa5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 A0A1W2PQD8 194 aa5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 F6X3S4 739 aa5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 H0YHG0 523 aa5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 SLU7O95391 586 aaKnown RBP5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 MAP4K4O95819 1239 aaPredicted RBP5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 ZNF76P36508 570 aa5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 MYL5Q02045 173 aa5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 PPP2R3AQ06190 1150 aa5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 MTX1Q13505 466 aa5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 APBB1IPQ7Z5R6 666 aaPredicted RBP5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 CCDC91Q7Z6B0 441 aa5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 KRT222Q8N1A0 295 aa5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 KRI1Q8N9T8 703 aaKnown RBP5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 FLAD1Q8NFF5 587 aa5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 CCDC8Q9H0W5 538 aaPredicted RBP5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 CLSTN2Q9H4D0 955 aa5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 TACC1O75410 805 aa5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 RPL13P26373 211 aaKnown RBP5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 GBP2P32456 591 aaPredicted RBP5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 KRT2P35908 639 aa5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 TRAPPC10P48553 1259 aa5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 EIF4A1P60842 406 aaKnown RBP5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 STK3Q13188 491 aa5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 CUL4AQ13619 759 aa5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 NOLC1Q14978 699 aaKnown RBP eCLIP5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 KIF4BQ2VIQ3 1234 aa5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 CEP135Q66GS9 1140 aa5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 LPIN2Q92539 896 aa5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 ERO1AQ96HE7 468 aa5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 CCDC94Q9BW85 323 aaPredicted RBP5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 SH3TC1Q8TE82 1336 aa5.4□□□□□ -1.55
NDFIP1-202ENST00000503388 LAD1O00515 517 aa5.39□□□□□ -1.55
NDFIP1-202ENST00000503388 RBM6P78332 1123 aaKnown RBP5.39□□□□□ -1.55
NDFIP1-202ENST00000503388 TYRO3Q06418 890 aa5.39□□□□□ -1.55
NDFIP1-202ENST00000503388 APOBRQ0VD83 1088 aa5.39□□□□□ -1.55
NDFIP1-202ENST00000503388 TNNI3KQ59H18 835 aa5.39□□□□□ -1.55
NDFIP1-202ENST00000503388 LUZP1Q86V48 1076 aa5.39□□□□□ -1.55
NDFIP1-202ENST00000503388 TEX2Q8IWB9 1127 aa5.39□□□□□ -1.55
NDFIP1-202ENST00000503388 JAKMIP2Q96AA8 810 aa5.39□□□□□ -1.55
NDFIP1-202ENST00000503388 EXOC1Q9NV70 894 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms