RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 AK9Q5TCS8 1911 aa13.4□□□□□ -0.26
SNCA-207ENST00000502987 ARAP2Q8WZ64 1704 aa13.39□□□□□ -0.27
SNCA-207ENST00000502987 EYA2O00167 538 aa13.39□□□□□ -0.27
SNCA-207ENST00000502987 VGLL2Q8N8G2 317 aa13.39□□□□□ -0.27
SNCA-207ENST00000502987 NOB1Q9ULX3 412 aaKnown RBP13.39□□□□□ -0.27
SNCA-207ENST00000502987 CSADQ9Y600 493 aa13.39□□□□□ -0.27
SNCA-207ENST00000502987 SSC5DA1L4H1 1573 aa13.39□□□□□ -0.27
SNCA-207ENST00000502987 CACNB3P54284 484 aa13.38□□□□□ -0.27
SNCA-207ENST00000502987 MAP3K9P80192 1104 aa13.38□□□□□ -0.27
SNCA-207ENST00000502987 HDLBPQ00341 1268 aaKnown RBP13.38□□□□□ -0.27
SNCA-207ENST00000502987 NOM1Q5C9Z4 860 aaKnown RBP13.38□□□□□ -0.27
SNCA-207ENST00000502987 FBXO46Q6PJ61 603 aaPredicted RBP13.38□□□□□ -0.27
SNCA-207ENST00000502987 OPTNQ96CV9 577 aa13.38□□□□□ -0.27
SNCA-207ENST00000502987 HDAC5Q9UQL6 1122 aa13.38□□□□□ -0.27
SNCA-207ENST00000502987 MAST3O60307 1309 aa13.38□□□□□ -0.27
SNCA-207ENST00000502987 IGF2BP3O00425 579 aaKnown RBP eCLIP13.37□□□□□ -0.27
SNCA-207ENST00000502987 WDR66Q8TBY9 1149 aa13.37□□□□□ -0.27
SNCA-207ENST00000502987 LPIN2Q92539 896 aa13.37□□□□□ -0.27
SNCA-207ENST00000502987 CFHR5Q9BXR6 569 aa13.37□□□□□ -0.27
SNCA-207ENST00000502987 API5Q9BZZ5 524 aaKnown RBP13.37□□□□□ -0.27
SNCA-207ENST00000502987 GNL3LQ9NVN8 582 aaKnown RBP13.37□□□□□ -0.27
SNCA-207ENST00000502987 CEP126Q9P2H0 1117 aa13.37□□□□□ -0.27
SNCA-207ENST00000502987 TRIM17Q9Y577 477 aa13.37□□□□□ -0.27
SNCA-207ENST00000502987 CT47B1P0C2W7 299 aaPredicted RBP13.36□□□□□ -0.27
SNCA-207ENST00000502987 FGFR2P21802 821 aa13.36□□□□□ -0.27
SNCA-207ENST00000502987 GJA5P36382 358 aa13.36□□□□□ -0.27
SNCA-207ENST00000502987 CDAN1Q8IWY9 1227 aa13.36□□□□□ -0.27
SNCA-207ENST00000502987 HOOK2Q96ED9 719 aa13.36□□□□□ -0.27
SNCA-207ENST00000502987 ZDHHC15Q96MV8 337 aa13.36□□□□□ -0.27
SNCA-207ENST00000502987 TEPSINQ96N21 525 aa13.36□□□□□ -0.27
SNCA-207ENST00000502987 SUGT1Q9Y2Z0 365 aa13.36□□□□□ -0.27
SNCA-207ENST00000502987 OTOFQ9HC10 1997 aa13.35□□□□□ -0.27
SNCA-207ENST00000502987 PYGBP11216 843 aa13.35□□□□□ -0.27
SNCA-207ENST00000502987 RFX5P48382 616 aaPredicted RBP13.35□□□□□ -0.27
SNCA-207ENST00000502987 CRHR2Q13324 411 aa13.35□□□□□ -0.27
SNCA-207ENST00000502987 ATP2B3Q16720 1220 aa13.35□□□□□ -0.27
SNCA-207ENST00000502987 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.35□□□□□ -0.27
SNCA-207ENST00000502987 ATG9AQ7Z3C6 839 aa13.35□□□□□ -0.27
SNCA-207ENST00000502987 TRMT2AQ8IZ69 625 aaKnown RBP13.35□□□□□ -0.27
SNCA-207ENST00000502987 ERO1AQ96HE7 468 aa13.35□□□□□ -0.27
SNCA-207ENST00000502987 MRIQ9BWK5 157 aa13.35□□□□□ -0.27
SNCA-207ENST00000502987 LRRFIP2Q9Y608 721 aaKnown RBP13.35□□□□□ -0.27
SNCA-207ENST00000502987 KIF16BQ96L93 1317 aa13.35□□□□□ -0.27
SNCA-207ENST00000502987 CCL15-CCL14A0A0B4J2E2 113 aa13.34□□□□□ -0.27
SNCA-207ENST00000502987 WDHD1O75717 1129 aaPredicted RBP13.34□□□□□ -0.27
SNCA-207ENST00000502987 GTF2A2P52657 109 aa13.34□□□□□ -0.27
SNCA-207ENST00000502987 VGLL4Q14135 290 aa13.34□□□□□ -0.27
SNCA-207ENST00000502987 CCL15Q16663 113 aa13.34□□□□□ -0.27
SNCA-207ENST00000502987 HHIPL2Q6UWX4 724 aa13.34□□□□□ -0.27
SNCA-207ENST00000502987 CD99L2Q8TCZ2 262 aa13.34□□□□□ -0.27
SNCA-207ENST00000502987 PTPN18Q99952 460 aa13.34□□□□□ -0.27
SNCA-207ENST00000502987 CIAO1O76071 339 aa13.33□□□□□ -0.28
SNCA-207ENST00000502987 LDHBP07195 334 aaKnown RBP13.33□□□□□ -0.28
SNCA-207ENST00000502987 IL15P40933 162 aaPredicted RBP13.33□□□□□ -0.28
SNCA-207ENST00000502987 SP3Q02447 781 aa13.33□□□□□ -0.28
SNCA-207ENST00000502987 TCP10Q12799 353 aa13.33□□□□□ -0.28
SNCA-207ENST00000502987 TAF1CQ15572 869 aaPredicted RBP13.33□□□□□ -0.28
SNCA-207ENST00000502987 DCAF15Q66K64 600 aa13.33□□□□□ -0.28
SNCA-207ENST00000502987 APOBEC3HQ6NTF7 200 aaKnown RBP13.33□□□□□ -0.28
SNCA-207ENST00000502987 MIGA2Q7L4E1 593 aa13.33□□□□□ -0.28
SNCA-207ENST00000502987 OTOP1Q7RTM1 612 aa13.33□□□□□ -0.28
SNCA-207ENST00000502987 FAM83AQ86UY5 434 aa13.33□□□□□ -0.28
SNCA-207ENST00000502987 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.33□□□□□ -0.28
SNCA-207ENST00000502987 WRNIP1Q96S55 665 aa13.33□□□□□ -0.28
SNCA-207ENST00000502987 ZFYVE28Q9HCC9 887 aa13.33□□□□□ -0.28
SNCA-207ENST00000502987 FBXO3Q9UK99 471 aa13.33□□□□□ -0.28
SNCA-207ENST00000502987 PA2G4Q9UQ80 394 aaKnown RBP13.33□□□□□ -0.28
SNCA-207ENST00000502987 TESPA1A2RU30 521 aaPredicted RBP13.32□□□□□ -0.28
SNCA-207ENST00000502987 CCER2I3L3R5 266 aa13.32□□□□□ -0.28
SNCA-207ENST00000502987 ARHGEF6Q15052 776 aa13.32□□□□□ -0.28
SNCA-207ENST00000502987 FKBP1CQ5VVH2 108 aa13.32□□□□□ -0.28
SNCA-207ENST00000502987 ZKSCAN4Q969J2 545 aaPredicted RBP13.32□□□□□ -0.28
SNCA-207ENST00000502987 MS4A4AQ96JQ5 239 aa13.32□□□□□ -0.28
SNCA-207ENST00000502987 EFCC1Q9HA90 598 aa13.32□□□□□ -0.28
SNCA-207ENST00000502987 DENND2AQ9ULE3 1009 aa13.32□□□□□ -0.28
SNCA-207ENST00000502987 LAMB1P07942 1786 aa13.32□□□□□ -0.28
SNCA-207ENST00000502987 PDE4DIPQ5VU43 2346 aa13.31□□□□□ -0.28
SNCA-207ENST00000502987 RARSP54136 660 aaKnown RBP13.31□□□□□ -0.28
SNCA-207ENST00000502987 DIXDC1Q155Q3 683 aa13.31□□□□□ -0.28
SNCA-207ENST00000502987 ERO1BQ86YB8 467 aa13.31□□□□□ -0.28
SNCA-207ENST00000502987 BRI3BPQ8WY22 251 aa13.31□□□□□ -0.28
SNCA-207ENST00000502987 FRAT1Q92837 279 aaPredicted RBP13.31□□□□□ -0.28
SNCA-207ENST00000502987 MEIS3Q99687 375 aa13.31□□□□□ -0.28
SNCA-207ENST00000502987 ZNF341Q9BYN7 854 aa13.31□□□□□ -0.28
SNCA-207ENST00000502987 USP40Q9NVE5 1235 aa13.31□□□□□ -0.28
SNCA-207ENST00000502987 IPO8O15397 1037 aaKnown RBP13.3□□□□□ -0.28
SNCA-207ENST00000502987 GNAI3P08754 354 aa13.3□□□□□ -0.28
SNCA-207ENST00000502987 CETPP11597 493 aa13.3□□□□□ -0.28
SNCA-207ENST00000502987 PRDX5P30044 214 aa13.3□□□□□ -0.28
SNCA-207ENST00000502987 PHKA1P46020 1223 aa13.3□□□□□ -0.28
SNCA-207ENST00000502987 TIMM10P62072 90 aa13.3□□□□□ -0.28
SNCA-207ENST00000502987 CDC42EP5Q6NZY7 148 aa13.3□□□□□ -0.28
SNCA-207ENST00000502987 FAM151AQ8WW52 585 aa13.3□□□□□ -0.28
SNCA-207ENST00000502987 PCDH10Q9P2E7 1040 aa13.3□□□□□ -0.28
SNCA-207ENST00000502987 PTPN22Q9Y2R2 807 aa13.3□□□□□ -0.28
SNCA-207ENST00000502987 DAGLAQ9Y4D2 1042 aa13.3□□□□□ -0.28
SNCA-207ENST00000502987 MYH2Q9UKX2 1941 aa13.3□□□□□ -0.28
SNCA-207ENST00000502987 SPDYE5A6NIY4 337 aa13.29□□□□□ -0.28
SNCA-207ENST00000502987 SRGAP3O43295 1099 aa13.29□□□□□ -0.28
SNCA-207ENST00000502987 PLCG2P16885 1265 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms