RNA–Protein interactions for RNA: ENST00000502575.1

PDE4D-209, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-209ENST00000502575 HYPKQ9NX55 129 aa11.28□□□□□ -0.6
PDE4D-209ENST00000502575 ATP6V0A2Q9Y487 856 aa11.28□□□□□ -0.6
PDE4D-209ENST00000502575 GJA3Q9Y6H8 435 aa11.28□□□□□ -0.6
PDE4D-209ENST00000502575 IQCA1LA6NCM1 817 aa11.27□□□□□ -0.61
PDE4D-209ENST00000502575 WFS1O76024 890 aa11.27□□□□□ -0.61
PDE4D-209ENST00000502575 SNRPBP14678 240 aaKnown RBP11.27□□□□□ -0.61
PDE4D-209ENST00000502575 EPHX2P34913 555 aa11.27□□□□□ -0.61
PDE4D-209ENST00000502575 LCE2AQ5TA79 106 aaPredicted RBP11.27□□□□□ -0.61
PDE4D-209ENST00000502575 GPC2Q8N158 579 aa11.27□□□□□ -0.61
PDE4D-209ENST00000502575 HACL1Q9UJ83 578 aa11.27□□□□□ -0.61
PDE4D-209ENST00000502575 THSD7BQ9C0I4 1608 aa11.27□□□□□ -0.61
PDE4D-209ENST00000502575 PPIP5K2O43314 1243 aa11.26□□□□□ -0.61
PDE4D-209ENST00000502575 SCNN1DP51172 638 aa11.26□□□□□ -0.61
PDE4D-209ENST00000502575 LDHDQ86WU2 507 aa11.26□□□□□ -0.61
PDE4D-209ENST00000502575 JMYQ8N9B5 988 aa11.26□□□□□ -0.61
PDE4D-209ENST00000502575 PNMA1Q8ND90 353 aa11.26□□□□□ -0.61
PDE4D-209ENST00000502575 JDP2Q8WYK2 163 aa11.26□□□□□ -0.61
PDE4D-209ENST00000502575 JARID2Q92833 1246 aaPredicted RBP11.26□□□□□ -0.61
PDE4D-209ENST00000502575 CELF1Q92879 486 aaKnown RBP11.26□□□□□ -0.61
PDE4D-209ENST00000502575 PASKQ96RG2 1323 aa11.26□□□□□ -0.61
PDE4D-209ENST00000502575 ECM29Q5VYK3 1845 aa11.25□□□□□ -0.61
PDE4D-209ENST00000502575 TIMP2P16035 220 aa11.25□□□□□ -0.61
PDE4D-209ENST00000502575 WDR4P57081 412 aaKnown RBP11.25□□□□□ -0.61
PDE4D-209ENST00000502575 CALD1Q05682 793 aaKnown RBP11.25□□□□□ -0.61
PDE4D-209ENST00000502575 GRAPQ13588 217 aa11.25□□□□□ -0.61
PDE4D-209ENST00000502575 SCARF1Q14162 830 aa11.25□□□□□ -0.61
PDE4D-209ENST00000502575 C4orf48Q5BLP8 95 aa11.25□□□□□ -0.61
PDE4D-209ENST00000502575 MAP1SQ66K74 1059 aaPredicted RBP11.25□□□□□ -0.61
PDE4D-209ENST00000502575 PDXDC2PQ6P474 469 aa11.25□□□□□ -0.61
PDE4D-209ENST00000502575 DDX46Q7L014 1031 aaKnown RBP11.25□□□□□ -0.61
PDE4D-209ENST00000502575 TRIM46Q7Z4K8 759 aa11.25□□□□□ -0.61
PDE4D-209ENST00000502575 NPAS3Q8IXF0 933 aa11.25□□□□□ -0.61
PDE4D-209ENST00000502575 GRAPLQ8TC17 118 aaPredicted RBP11.25□□□□□ -0.61
PDE4D-209ENST00000502575 MYD88Q99836 296 aa11.25□□□□□ -0.61
PDE4D-209ENST00000502575 MRS2Q9HD23 443 aa11.25□□□□□ -0.61
PDE4D-209ENST00000502575 CDV3Q9UKY7 258 aaKnown RBP11.25□□□□□ -0.61
PDE4D-209ENST00000502575 ZEB1P37275 1124 aaPredicted RBP11.24□□□□□ -0.61
PDE4D-209ENST00000502575 EPS15P42566 896 aa11.24□□□□□ -0.61
PDE4D-209ENST00000502575 EIF6P56537 245 aaKnown RBP11.24□□□□□ -0.61
PDE4D-209ENST00000502575 CTDSPL2Q05D32 466 aa11.24□□□□□ -0.61
PDE4D-209ENST00000502575 ARID5BQ14865 1188 aa11.24□□□□□ -0.61
PDE4D-209ENST00000502575 DPP8Q6V1X1 898 aaPredicted RBP11.24□□□□□ -0.61
PDE4D-209ENST00000502575 WWC1Q8IX03 1113 aa11.24□□□□□ -0.61
PDE4D-209ENST00000502575 SP8Q8IXZ3 490 aa11.24□□□□□ -0.61
PDE4D-209ENST00000502575 NIM1KQ8IY84 436 aa11.24□□□□□ -0.61
PDE4D-209ENST00000502575 GPR101Q96P66 508 aaPredicted RBP11.24□□□□□ -0.61
PDE4D-209ENST00000502575 KLF16Q9BXK1 252 aaPredicted RBP11.24□□□□□ -0.61
PDE4D-209ENST00000502575 RTFDC1Q9BY42 306 aaPredicted RBP11.24□□□□□ -0.61
PDE4D-209ENST00000502575 MYH13Q9UKX3 1938 aa11.23□□□□□ -0.61
PDE4D-209ENST00000502575 IRS4O14654 1257 aaPredicted RBP11.23□□□□□ -0.61
PDE4D-209ENST00000502575 BBOX1O75936 387 aa11.23□□□□□ -0.61
PDE4D-209ENST00000502575 FMR1Q06787 632 aaKnown RBP eCLIP11.23□□□□□ -0.61
PDE4D-209ENST00000502575 CXCL9Q07325 125 aa11.23□□□□□ -0.61
PDE4D-209ENST00000502575 NFX1Q12986 1120 aaKnown RBP11.23□□□□□ -0.61
PDE4D-209ENST00000502575 SF3B3Q15393 1217 aaKnown RBP11.23□□□□□ -0.61
PDE4D-209ENST00000502575 MRPL14Q6P1L8 145 aaKnown RBP11.23□□□□□ -0.61
PDE4D-209ENST00000502575 G2E3Q7L622 706 aa11.23□□□□□ -0.61
PDE4D-209ENST00000502575 SEC31BQ9NQW1 1179 aa11.23□□□□□ -0.61
PDE4D-209ENST00000502575 MKRN1Q9UHC7 482 aaKnown RBP11.23□□□□□ -0.61
PDE4D-209ENST00000502575 FKBPLQ9UIM3 349 aa11.23□□□□□ -0.61
PDE4D-209ENST00000502575 GPSM3Q9Y4H4 160 aa11.23□□□□□ -0.61
PDE4D-209ENST00000502575 AKAP11Q9UKA4 1901 aa11.23□□□□□ -0.61
PDE4D-209ENST00000502575 SHTN1A0MZ66 631 aa11.22□□□□□ -0.61
PDE4D-209ENST00000502575 YDJCA8MPS7 323 aa11.22□□□□□ -0.61
PDE4D-209ENST00000502575 TERTO14746 1132 aaKnown RBP11.22□□□□□ -0.61
PDE4D-209ENST00000502575 BMP1P13497 986 aa11.22□□□□□ -0.61
PDE4D-209ENST00000502575 KIAA2012Q0VF49 1180 aa11.22□□□□□ -0.61
PDE4D-209ENST00000502575 TRIM28Q13263 835 aaKnown RBP11.22□□□□□ -0.61
PDE4D-209ENST00000502575 CCDC27Q2M243 656 aa11.22□□□□□ -0.61
PDE4D-209ENST00000502575 CCDC30Q5VVM6 783 aa11.22□□□□□ -0.61
PDE4D-209ENST00000502575 CCDC85AQ96PX6 553 aaPredicted RBP11.22□□□□□ -0.61
PDE4D-209ENST00000502575 FANCIQ9NVI1 1328 aa11.22□□□□□ -0.61
PDE4D-209ENST00000502575 CASP8AP2Q9UKL3 1982 aa11.22□□□□□ -0.61
PDE4D-209ENST00000502575 MAP3K2Q9Y2U5 619 aa11.22□□□□□ -0.61
PDE4D-209ENST00000502575 CNTNAP1P78357 1384 aa11.21□□□□□ -0.61
PDE4D-209ENST00000502575 ANP32CO43423 234 aa11.21□□□□□ -0.61
PDE4D-209ENST00000502575 RAD17O75943 681 aa11.21□□□□□ -0.61
PDE4D-209ENST00000502575 IGKV5-2P06315 115 aa11.21□□□□□ -0.61
PDE4D-209ENST00000502575 GRM5P41594 1212 aa11.21□□□□□ -0.61
PDE4D-209ENST00000502575 GMPSP49915 693 aaPredicted RBP11.21□□□□□ -0.61
PDE4D-209ENST00000502575 GPSM2P81274 684 aa11.21□□□□□ -0.61
PDE4D-209ENST00000502575 TWISTNBQ3B726 338 aaPredicted RBP11.21□□□□□ -0.61
PDE4D-209ENST00000502575 CNTROBQ8N137 903 aa11.21□□□□□ -0.61
PDE4D-209ENST00000502575 ZBTB38Q8NAP3 1195 aaPredicted RBP11.21□□□□□ -0.61
PDE4D-209ENST00000502575 METTL22Q9BUU2 404 aaPredicted RBP11.21□□□□□ -0.61
PDE4D-209ENST00000502575 TMX4Q9H1E5 349 aaPredicted RBP11.21□□□□□ -0.61
PDE4D-209ENST00000502575 CWC25Q9NXE8 425 aaPredicted RBP11.21□□□□□ -0.61
PDE4D-209ENST00000502575 ZNRF3Q9ULT6 936 aa11.21□□□□□ -0.61
PDE4D-209ENST00000502575 PI4KAP2A4QPH2 592 aa11.2□□□□□ -0.62
PDE4D-209ENST00000502575 PCCAP05165 728 aaPredicted RBP11.2□□□□□ -0.62
PDE4D-209ENST00000502575 HSPA1AP0DMV8 641 aaKnown RBP11.2□□□□□ -0.62
PDE4D-209ENST00000502575 HSPA1BP0DMV9 641 aaKnown RBP11.2□□□□□ -0.62
PDE4D-209ENST00000502575 LMOD1P29536 600 aaPredicted RBP11.2□□□□□ -0.62
PDE4D-209ENST00000502575 CWF19L2Q2TBE0 894 aaKnown RBP11.2□□□□□ -0.62
PDE4D-209ENST00000502575 VASH1Q7L8A9 365 aaPredicted RBP11.2□□□□□ -0.62
PDE4D-209ENST00000502575 PNMA8AQ86V59 439 aaPredicted RBP11.2□□□□□ -0.62
PDE4D-209ENST00000502575 PI4KAP1Q8N8J0 262 aa11.2□□□□□ -0.62
PDE4D-209ENST00000502575 PROCA1Q8NCQ7 364 aaPredicted RBP11.2□□□□□ -0.62
PDE4D-209ENST00000502575 CCDC191Q8NCU4 936 aa11.2□□□□□ -0.62
PDE4D-209ENST00000502575 SUPT20HQ8NEM7 779 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms